RNA–Protein interactions for RNA: ENST00000452495.1

TRAPPC12-211, Transcript of trafficking protein particle complex 12, humanhuman

TSL 4

Gene TRAPPC12, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-211ENST00000452495 HDAC3O15379 428 aa13.73□□□□□ -0.21
TRAPPC12-211ENST00000452495 DNAJB6O75190 326 aa13.73□□□□□ -0.21
TRAPPC12-211ENST00000452495 VPS4BO75351 444 aa13.73□□□□□ -0.21
TRAPPC12-211ENST00000452495 MYO1DO94832 1006 aa13.73□□□□□ -0.21
TRAPPC12-211ENST00000452495 HEXBP07686 556 aa13.73□□□□□ -0.21
TRAPPC12-211ENST00000452495 NR2F6P10588 404 aa13.73□□□□□ -0.21
TRAPPC12-211ENST00000452495 CPN2P22792 545 aa13.73□□□□□ -0.21
TRAPPC12-211ENST00000452495 MMP11P24347 488 aa13.73□□□□□ -0.21
TRAPPC12-211ENST00000452495 ITPKBP27987 946 aa13.73□□□□□ -0.21
TRAPPC12-211ENST00000452495 TLX1P31314 330 aaPredicted RBP13.73□□□□□ -0.21
TRAPPC12-211ENST00000452495 EMP2P54851 167 aa13.73□□□□□ -0.21
TRAPPC12-211ENST00000452495 HSD17B7P56937 341 aa13.73□□□□□ -0.21
TRAPPC12-211ENST00000452495 BTKQ06187 659 aa13.73□□□□□ -0.21
TRAPPC12-211ENST00000452495 VAC14Q08AM6 782 aa13.73□□□□□ -0.21
TRAPPC12-211ENST00000452495 ZNF763Q0D2J5 394 aa13.73□□□□□ -0.21
TRAPPC12-211ENST00000452495 ATP6AP1LQ52LC2 224 aa13.73□□□□□ -0.21
TRAPPC12-211ENST00000452495 MFSD4BQ5TF39 518 aa13.73□□□□□ -0.21
TRAPPC12-211ENST00000452495 INO80CQ6PI98 192 aaPredicted RBP13.73□□□□□ -0.21
TRAPPC12-211ENST00000452495 SHISA6Q6ZSJ9 500 aa13.73□□□□□ -0.21
TRAPPC12-211ENST00000452495 Q6ZSR9 355 aa13.73□□□□□ -0.21
TRAPPC12-211ENST00000452495 PRSS58Q8IYP2 241 aa13.73□□□□□ -0.21
TRAPPC12-211ENST00000452495 FAM47BQ8NA70 645 aa13.73□□□□□ -0.21
TRAPPC12-211ENST00000452495 C7orf57Q8NEG2 295 aa13.73□□□□□ -0.21
TRAPPC12-211ENST00000452495 ADAMTS17Q8TE56 1095 aa13.73□□□□□ -0.21
TRAPPC12-211ENST00000452495 SNRNP27Q8WVK2 155 aaKnown RBP13.73□□□□□ -0.21
TRAPPC12-211ENST00000452495 THAP4Q8WY91 577 aa13.73□□□□□ -0.21
TRAPPC12-211ENST00000452495 FCRL1Q96LA6 429 aa13.73□□□□□ -0.21
TRAPPC12-211ENST00000452495 CSF3RQ99062 836 aa13.73□□□□□ -0.21
TRAPPC12-211ENST00000452495 MAPKAP1Q9BPZ7 522 aa13.73□□□□□ -0.21
TRAPPC12-211ENST00000452495 WDR41Q9HAD4 459 aa13.73□□□□□ -0.21
TRAPPC12-211ENST00000452495 PRDM9Q9NQV7 894 aa13.73□□□□□ -0.21
TRAPPC12-211ENST00000452495 PNPOQ9NVS9 261 aa13.73□□□□□ -0.21
TRAPPC12-211ENST00000452495 FBXW2Q9UKT8 454 aa13.73□□□□□ -0.21
TRAPPC12-211ENST00000452495 ASB4Q9Y574 426 aa13.73□□□□□ -0.21
TRAPPC12-211ENST00000452495 PCSK5Q92824 1860 aa13.72□□□□□ -0.21
TRAPPC12-211ENST00000452495 GNG14A0A1W2PPG7 69 aa13.72□□□□□ -0.21
TRAPPC12-211ENST00000452495 A0A1W2PQ72 361 aa13.72□□□□□ -0.21
TRAPPC12-211ENST00000452495 SEC22BO75396 215 aa13.72□□□□□ -0.21
TRAPPC12-211ENST00000452495 JRKO75564 520 aa13.72□□□□□ -0.21
TRAPPC12-211ENST00000452495 CDC123O75794 336 aaPredicted RBP13.72□□□□□ -0.21
TRAPPC12-211ENST00000452495 GBAP04062 536 aa13.72□□□□□ -0.21
TRAPPC12-211ENST00000452495 JUNP05412 331 aaKnown RBP13.72□□□□□ -0.21
TRAPPC12-211ENST00000452495 C8orf89P0DMQ9 161 aa13.72□□□□□ -0.21
TRAPPC12-211ENST00000452495 MAPK1P28482 360 aa13.72□□□□□ -0.21
TRAPPC12-211ENST00000452495 PPP2R1BP30154 601 aa13.72□□□□□ -0.21
TRAPPC12-211ENST00000452495 OTX2P32243 289 aa13.72□□□□□ -0.21
TRAPPC12-211ENST00000452495 RPL38P63173 70 aaKnown RBP13.72□□□□□ -0.21
TRAPPC12-211ENST00000452495 RAE1P78406 368 aaKnown RBP13.72□□□□□ -0.21
TRAPPC12-211ENST00000452495 RHAGQ02094 409 aa13.72□□□□□ -0.21
TRAPPC12-211ENST00000452495 KIAA0040Q15053 153 aa13.72□□□□□ -0.21
TRAPPC12-211ENST00000452495 SMU1Q2TAY7 513 aa13.72□□□□□ -0.21
TRAPPC12-211ENST00000452495 PPP1R32Q7Z5V6 425 aa13.72□□□□□ -0.21
TRAPPC12-211ENST00000452495 MRGPREQ86SM8 312 aa13.72□□□□□ -0.21
TRAPPC12-211ENST00000452495 LAPTM4BQ86VI4 370 aa13.72□□□□□ -0.21
TRAPPC12-211ENST00000452495 SCUBE1Q8IWY4 988 aa13.72□□□□□ -0.21
TRAPPC12-211ENST00000452495 PLPP5Q8NEB5 264 aa13.72□□□□□ -0.21
TRAPPC12-211ENST00000452495 METTL21AQ8WXB1 218 aa13.72□□□□□ -0.21
TRAPPC12-211ENST00000452495 TUBGCP3Q96CW5 907 aa13.72□□□□□ -0.21
TRAPPC12-211ENST00000452495 CATSPER2Q96P56 530 aa13.72□□□□□ -0.21
TRAPPC12-211ENST00000452495 FAIM2Q9BWQ8 316 aa13.72□□□□□ -0.21
TRAPPC12-211ENST00000452495 EBPLQ9BY08 206 aa13.72□□□□□ -0.21
TRAPPC12-211ENST00000452495 CCDC134Q9H6E4 229 aa13.72□□□□□ -0.21
TRAPPC12-211ENST00000452495 MEAF6Q9HAF1 191 aa13.72□□□□□ -0.21
TRAPPC12-211ENST00000452495 MARCOQ9UEW3 520 aaPredicted RBP13.72□□□□□ -0.21
TRAPPC12-211ENST00000452495 C19orf25Q9UFG5 118 aaPredicted RBP13.72□□□□□ -0.21
TRAPPC12-211ENST00000452495 WBP11Q9Y2W2 641 aaKnown RBP13.72□□□□□ -0.21
TRAPPC12-211ENST00000452495 HS3ST3B1Q9Y662 390 aa13.72□□□□□ -0.21
TRAPPC12-211ENST00000452495 USP24Q9UPU5 2620 aa13.71□□□□□ -0.21
TRAPPC12-211ENST00000452495 LOC102723996A0A087X1L8 192 aa13.71□□□□□ -0.21
TRAPPC12-211ENST00000452495 IGKV3D-11A0A0A0MRZ8 115 aa13.71□□□□□ -0.21
TRAPPC12-211ENST00000452495 CDC14CA4D256 554 aa13.71□□□□□ -0.21
TRAPPC12-211ENST00000452495 PROM1O43490 865 aa13.71□□□□□ -0.21
TRAPPC12-211ENST00000452495 PRMT3O60678 531 aa13.71□□□□□ -0.21
TRAPPC12-211ENST00000452495 B4GALT2O60909 372 aa13.71□□□□□ -0.21
TRAPPC12-211ENST00000452495 ALOX12BO75342 701 aa13.71□□□□□ -0.21
TRAPPC12-211ENST00000452495 AIFM1O95831 613 aa13.71□□□□□ -0.21
TRAPPC12-211ENST00000452495 FOXL2P58012 376 aa13.71□□□□□ -0.21
TRAPPC12-211ENST00000452495 MAD2L1Q13257 205 aaPredicted RBP13.71□□□□□ -0.21
TRAPPC12-211ENST00000452495 ERV3-1Q14264 604 aa13.71□□□□□ -0.21
TRAPPC12-211ENST00000452495 ST3GAL2Q16842 350 aa13.71□□□□□ -0.21
TRAPPC12-211ENST00000452495 GALNTL6Q49A17 601 aa13.71□□□□□ -0.21
TRAPPC12-211ENST00000452495 FAM69BQ5VUD6 431 aa13.71□□□□□ -0.21
TRAPPC12-211ENST00000452495 OR52E8Q6IFG1 317 aa13.71□□□□□ -0.21
TRAPPC12-211ENST00000452495 NOXRED1Q6NXP6 359 aa13.71□□□□□ -0.21
TRAPPC12-211ENST00000452495 TMEM205Q6UW68 189 aa13.71□□□□□ -0.21
TRAPPC12-211ENST00000452495 IKBIPQ70UQ0 350 aa13.71□□□□□ -0.21
TRAPPC12-211ENST00000452495 WDR75Q8IWA0 830 aaKnown RBP13.71□□□□□ -0.21
TRAPPC12-211ENST00000452495 TANKQ92844 425 aa13.71□□□□□ -0.21
TRAPPC12-211ENST00000452495 C3orf30Q96M34 536 aa13.71□□□□□ -0.21
TRAPPC12-211ENST00000452495 NUF2Q9BZD4 464 aa13.71□□□□□ -0.21
TRAPPC12-211ENST00000452495 RPF2Q9H7B2 306 aaKnown RBP13.71□□□□□ -0.21
TRAPPC12-211ENST00000452495 CPNE5Q9HCH3 593 aa13.71□□□□□ -0.21
TRAPPC12-211ENST00000452495 MYNNQ9NPC7 610 aa13.71□□□□□ -0.21
TRAPPC12-211ENST00000452495 SLCO1B3Q9NPD5 702 aa13.71□□□□□ -0.21
TRAPPC12-211ENST00000452495 PRTFDC1Q9NRG1 225 aa13.71□□□□□ -0.21
TRAPPC12-211ENST00000452495 TEX10Q9NXF1 929 aaPredicted RBP13.71□□□□□ -0.21
TRAPPC12-211ENST00000452495 POLHQ9Y253 713 aa13.71□□□□□ -0.21
TRAPPC12-211ENST00000452495 ATG4BQ9Y4P1 393 aa13.71□□□□□ -0.21
TRAPPC12-211ENST00000452495 ATP6AP2A0A1C7CYW4 349 aa13.7□□□□□ -0.22
TRAPPC12-211ENST00000452495 A0A1W2PR48 441 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms