RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 CPSF7Q8N684 471 aaKnown RBP11.62□□□□□ -0.55
CPSF4-208ENST00000452047 TEX9Q8N6V9 391 aa11.62□□□□□ -0.55
CPSF4-208ENST00000452047 ACOT4Q8N9L9 421 aa11.62□□□□□ -0.55
CPSF4-208ENST00000452047 FAM98AQ8NCA5 519 aaKnown RBP11.62□□□□□ -0.55
CPSF4-208ENST00000452047 ITLN2Q8WWU7 325 aaPredicted RBP11.62□□□□□ -0.55
CPSF4-208ENST00000452047 ISL2Q96A47 359 aa11.62□□□□□ -0.55
CPSF4-208ENST00000452047 CCDC120Q96HB5 630 aa11.62□□□□□ -0.55
CPSF4-208ENST00000452047 MAPKAP1Q9BPZ7 522 aa11.62□□□□□ -0.55
CPSF4-208ENST00000452047 ROGDIQ9GZN7 287 aa11.62□□□□□ -0.55
CPSF4-208ENST00000452047 CDC42EP4Q9H3Q1 356 aaKnown RBP11.62□□□□□ -0.55
CPSF4-208ENST00000452047 VTI1BQ9UEU0 232 aa11.62□□□□□ -0.55
CPSF4-208ENST00000452047 ZNF835Q9Y2P0 537 aa11.62□□□□□ -0.55
CPSF4-208ENST00000452047 TSC22D4Q9Y3Q8 395 aa11.62□□□□□ -0.55
CPSF4-208ENST00000452047 CSMD2Q7Z408 3487 aa11.62□□□□□ -0.55
CPSF4-208ENST00000452047 GTF3C1Q12789 2109 aa11.62□□□□□ -0.55
CPSF4-208ENST00000452047 PCNX1Q96RV3 2341 aa11.61□□□□□ -0.55
CPSF4-208ENST00000452047 LRRC14BA6NHZ5 514 aa11.61□□□□□ -0.55
CPSF4-208ENST00000452047 NPIPA5E9PKD4 350 aa11.61□□□□□ -0.55
CPSF4-208ENST00000452047 LDB3O75112 727 aa11.61□□□□□ -0.55
CPSF4-208ENST00000452047 SH3BGRLO75368 114 aa11.61□□□□□ -0.55
CPSF4-208ENST00000452047 ITGA10O75578 1167 aa11.61□□□□□ -0.55
CPSF4-208ENST00000452047 MLYCDO95822 493 aa11.61□□□□□ -0.55
CPSF4-208ENST00000452047 GFAPP14136 432 aa11.61□□□□□ -0.55
CPSF4-208ENST00000452047 TYK2P29597 1187 aa11.61□□□□□ -0.55
CPSF4-208ENST00000452047 PIK3CBP42338 1070 aa11.61□□□□□ -0.55
CPSF4-208ENST00000452047 SSR2P43308 183 aa11.61□□□□□ -0.55
CPSF4-208ENST00000452047 PCBP2Q15366 365 aaKnown RBP eCLIP11.61□□□□□ -0.55
CPSF4-208ENST00000452047 PFKFB4Q16877 469 aa11.61□□□□□ -0.55
CPSF4-208ENST00000452047 TECRLQ5HYJ1 363 aa11.61□□□□□ -0.55
CPSF4-208ENST00000452047 DEPDC1Q5TB30 811 aa11.61□□□□□ -0.55
CPSF4-208ENST00000452047 Q6ZPB1 254 aaPredicted RBP11.61□□□□□ -0.55
CPSF4-208ENST00000452047 CHSY3Q70JA7 882 aa11.61□□□□□ -0.55
CPSF4-208ENST00000452047 PLD6Q8N2A8 252 aaKnown RBP11.61□□□□□ -0.55
CPSF4-208ENST00000452047 TMEM132CQ8N3T6 1108 aa11.61□□□□□ -0.55
CPSF4-208ENST00000452047 HUS1BQ8NHY5 278 aa11.61□□□□□ -0.55
CPSF4-208ENST00000452047 PTPMT1Q8WUK0 201 aaPredicted RBP11.61□□□□□ -0.55
CPSF4-208ENST00000452047 SLC44A1Q8WWI5 657 aa11.61□□□□□ -0.55
CPSF4-208ENST00000452047 TMEM125Q96AQ2 219 aa11.61□□□□□ -0.55
CPSF4-208ENST00000452047 CMTM7Q96FZ5 175 aa11.61□□□□□ -0.55
CPSF4-208ENST00000452047 SORBS1Q9BX66 1292 aaKnown RBP11.61□□□□□ -0.55
CPSF4-208ENST00000452047 ALOXE3Q9BYJ1 711 aa11.61□□□□□ -0.55
CPSF4-208ENST00000452047 OR51B5Q9H339 312 aa11.61□□□□□ -0.55
CPSF4-208ENST00000452047 DMRT3Q9NQL9 472 aa11.61□□□□□ -0.55
CPSF4-208ENST00000452047 MTRF1LQ9UGC7 380 aaKnown RBP11.61□□□□□ -0.55
CPSF4-208ENST00000452047 ADGRE2Q9UHX3 823 aa11.61□□□□□ -0.55
CPSF4-208ENST00000452047 TINAGQ9UJW2 476 aa11.61□□□□□ -0.55
CPSF4-208ENST00000452047 FBXW2Q9UKT8 454 aa11.61□□□□□ -0.55
CPSF4-208ENST00000452047 NPIPA1Q9UND3 350 aa11.61□□□□□ -0.55
CPSF4-208ENST00000452047 CLCA3PQ9Y6N3 262 aa11.61□□□□□ -0.55
CPSF4-208ENST00000452047 MYO9AB2RTY4 2548 aa11.61□□□□□ -0.55
CPSF4-208ENST00000452047 ABCA12Q86UK0 2595 aa11.61□□□□□ -0.55
CPSF4-208ENST00000452047 TACC2O95359 2948 aa11.6□□□□□ -0.55
CPSF4-208ENST00000452047 MYOCOSA0A1B0GUC4 107 aa11.6□□□□□ -0.55
CPSF4-208ENST00000452047 H0YIV9 168 aa11.6□□□□□ -0.55
CPSF4-208ENST00000452047 SAP18O00422 153 aaKnown RBP11.6□□□□□ -0.55
CPSF4-208ENST00000452047 CCL21O00585 134 aa11.6□□□□□ -0.55
CPSF4-208ENST00000452047 PLPP1O14494 284 aa11.6□□□□□ -0.55
CPSF4-208ENST00000452047 ASNA1O43681 348 aa11.6□□□□□ -0.55
CPSF4-208ENST00000452047 UGDHO60701 494 aa11.6□□□□□ -0.55
CPSF4-208ENST00000452047 ZFAND5O76080 213 aa11.6□□□□□ -0.55
CPSF4-208ENST00000452047 SIX3O95343 332 aaPredicted RBP11.6□□□□□ -0.55
CPSF4-208ENST00000452047 ACSL3O95573 720 aa11.6□□□□□ -0.55
CPSF4-208ENST00000452047 ZNF24P17028 368 aa11.6□□□□□ -0.55
CPSF4-208ENST00000452047 IGLV3-21P80748 117 aaPredicted RBP11.6□□□□□ -0.55
CPSF4-208ENST00000452047 STX4Q12846 297 aa11.6□□□□□ -0.55
CPSF4-208ENST00000452047 DDX39BQ13838 428 aaKnown RBP11.6□□□□□ -0.55
CPSF4-208ENST00000452047 SERTAD2Q14140 314 aa11.6□□□□□ -0.55
CPSF4-208ENST00000452047 C3AR1Q16581 482 aa11.6□□□□□ -0.55
CPSF4-208ENST00000452047 AP5B1Q2VPB7 878 aa11.6□□□□□ -0.55
CPSF4-208ENST00000452047 LIPJQ5W064 366 aa11.6□□□□□ -0.55
CPSF4-208ENST00000452047 METTL2BQ6P1Q9 378 aaKnown RBP11.6□□□□□ -0.55
CPSF4-208ENST00000452047 KLC3Q6P597 504 aa11.6□□□□□ -0.55
CPSF4-208ENST00000452047 C16orf47Q6ZP98 133 aaPredicted RBP11.6□□□□□ -0.55
CPSF4-208ENST00000452047 CEP128Q6ZU80 1094 aa11.6□□□□□ -0.55
CPSF4-208ENST00000452047 MDGA2Q7Z553 956 aa11.6□□□□□ -0.55
CPSF4-208ENST00000452047 CYP4Z2PQ8N1L4 340 aa11.6□□□□□ -0.55
CPSF4-208ENST00000452047 TMEM156Q8N614 296 aa11.6□□□□□ -0.55
CPSF4-208ENST00000452047 MORN4Q8NDC4 146 aa11.6□□□□□ -0.55
CPSF4-208ENST00000452047 OR14A16Q8NHC5 309 aa11.6□□□□□ -0.55
CPSF4-208ENST00000452047 DAZLQ92904 295 aaKnown RBP11.6□□□□□ -0.55
CPSF4-208ENST00000452047 ANKRD9Q96BM1 317 aaPredicted RBP11.6□□□□□ -0.55
CPSF4-208ENST00000452047 MAGED4Q96JG8 741 aa11.6□□□□□ -0.55
CPSF4-208ENST00000452047 FMO2Q99518 471 aa11.6□□□□□ -0.55
CPSF4-208ENST00000452047 MTERF1Q99551 399 aaKnown RBP11.6□□□□□ -0.55
CPSF4-208ENST00000452047 CCDC77Q9BR77 488 aa11.6□□□□□ -0.55
CPSF4-208ENST00000452047 ZNF717Q9BY31 904 aaPredicted RBP11.6□□□□□ -0.55
CPSF4-208ENST00000452047 ACTR8Q9H981 624 aa11.6□□□□□ -0.55
CPSF4-208ENST00000452047 ZNF358Q9NW07 568 aa11.6□□□□□ -0.55
CPSF4-208ENST00000452047 MYOTQ9UBF9 498 aa11.6□□□□□ -0.55
CPSF4-208ENST00000452047 SUCOQ9UBS9 1254 aaKnown RBP11.6□□□□□ -0.55
CPSF4-208ENST00000452047 SH3BGRL2Q9UJC5 107 aa11.6□□□□□ -0.55
CPSF4-208ENST00000452047 KLF13Q9Y2Y9 288 aaPredicted RBP11.6□□□□□ -0.55
CPSF4-208ENST00000452047 YARS2Q9Y2Z4 477 aaKnown RBP11.6□□□□□ -0.55
CPSF4-208ENST00000452047 PCDHGA11Q9Y5H2 935 aa11.6□□□□□ -0.55
CPSF4-208ENST00000452047 FGF17O60258 216 aa11.59□□□□□ -0.55
CPSF4-208ENST00000452047 OR2J2O76002 312 aa11.59□□□□□ -0.55
CPSF4-208ENST00000452047 IFNA16P05015 189 aa11.59□□□□□ -0.55
CPSF4-208ENST00000452047 INHBAP08476 426 aa11.59□□□□□ -0.55
CPSF4-208ENST00000452047 MEOX1P50221 254 aa11.59□□□□□ -0.55
CPSF4-208ENST00000452047 SSR4P51571 173 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms