RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 KCNK10P57789 538 aa20.31■□□□□ 0.84
C9orf3-208ENST00000451893 DNAJB13P59910 316 aa20.31■□□□□ 0.84
C9orf3-208ENST00000451893 SLBPQ14493 270 aaKnown RBP eCLIP20.31■□□□□ 0.84
C9orf3-208ENST00000451893 CHI3L2Q15782 390 aa20.31■□□□□ 0.84
C9orf3-208ENST00000451893 TECRLQ5HYJ1 363 aa20.31■□□□□ 0.84
C9orf3-208ENST00000451893 PIGWQ7Z7B1 504 aa20.31■□□□□ 0.84
C9orf3-208ENST00000451893 ISCA2Q86U28 154 aa20.31■□□□□ 0.84
C9orf3-208ENST00000451893 GPSM1Q86YR5 675 aa20.31■□□□□ 0.84
C9orf3-208ENST00000451893 CRLF3Q8IUI8 442 aa20.31■□□□□ 0.84
C9orf3-208ENST00000451893 ZNF473Q8WTR7 871 aaKnown RBP20.31■□□□□ 0.84
C9orf3-208ENST00000451893 KIAA1191Q96A73 305 aa20.31■□□□□ 0.84
C9orf3-208ENST00000451893 C7orf26Q96N11 449 aa20.31■□□□□ 0.84
C9orf3-208ENST00000451893 CLK4Q9HAZ1 481 aaKnown RBP20.31■□□□□ 0.84
C9orf3-208ENST00000451893 KLHL1Q9NR64 748 aa20.31■□□□□ 0.84
C9orf3-208ENST00000451893 LANCL2Q9NS86 450 aa20.31■□□□□ 0.84
C9orf3-208ENST00000451893 CD274Q9NZQ7 290 aa20.31■□□□□ 0.84
C9orf3-208ENST00000451893 SUCOQ9UBS9 1254 aaKnown RBP20.31■□□□□ 0.84
C9orf3-208ENST00000451893 SEC14L3Q9UDX4 400 aa20.31■□□□□ 0.84
C9orf3-208ENST00000451893 TRGV8A0A0C4DH27 118 aa20.3■□□□□ 0.84
C9orf3-208ENST00000451893 SYCE1LA8MT33 242 aa20.3■□□□□ 0.84
C9orf3-208ENST00000451893 FAM227AF5H4B4 570 aa20.3■□□□□ 0.84
C9orf3-208ENST00000451893 UNC5CO95185 931 aa20.3■□□□□ 0.84
C9orf3-208ENST00000451893 TFEBP19484 476 aa20.3■□□□□ 0.84
C9orf3-208ENST00000451893 EEF1DP29692 281 aaKnown RBP20.3■□□□□ 0.84
C9orf3-208ENST00000451893 SERPINB5P36952 375 aa20.3■□□□□ 0.84
C9orf3-208ENST00000451893 GDF5P43026 501 aa20.3■□□□□ 0.84
C9orf3-208ENST00000451893 SLC26A5P58743 744 aa20.3■□□□□ 0.84
C9orf3-208ENST00000451893 NAA20P61599 178 aa20.3■□□□□ 0.84
C9orf3-208ENST00000451893 BTN3A2P78410 334 aa20.3■□□□□ 0.84
C9orf3-208ENST00000451893 TGFBIQ15582 683 aa20.3■□□□□ 0.84
C9orf3-208ENST00000451893 C1QL3Q5VWW1 255 aa20.3■□□□□ 0.84
C9orf3-208ENST00000451893 LIPMQ5VYY2 423 aa20.3■□□□□ 0.84
C9orf3-208ENST00000451893 TMIGD1Q6UXZ0 262 aa20.3■□□□□ 0.84
C9orf3-208ENST00000451893 QSOX2Q6ZRP7 698 aa20.3■□□□□ 0.84
C9orf3-208ENST00000451893 C10orf107Q8IVU9 208 aa20.3■□□□□ 0.84
C9orf3-208ENST00000451893 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.3■□□□□ 0.84
C9orf3-208ENST00000451893 SHISA5Q8N114 240 aa20.3■□□□□ 0.84
C9orf3-208ENST00000451893 SPATA6LQ8N4H0 392 aa20.3■□□□□ 0.84
C9orf3-208ENST00000451893 AMER2Q8N7J2 671 aa20.3■□□□□ 0.84
C9orf3-208ENST00000451893 ANKRD53Q8N9V6 530 aa20.3■□□□□ 0.84
C9orf3-208ENST00000451893 TMEM178AQ8NBL3 297 aa20.3■□□□□ 0.84
C9orf3-208ENST00000451893 OR6Y1Q8NGX8 325 aa20.3■□□□□ 0.84
C9orf3-208ENST00000451893 RHBDF1Q96CC6 855 aa20.3■□□□□ 0.84
C9orf3-208ENST00000451893 TAAR6Q96RI8 345 aa20.3■□□□□ 0.84
C9orf3-208ENST00000451893 SLC6A16Q9GZN6 736 aa20.3■□□□□ 0.84
C9orf3-208ENST00000451893 COPS7BQ9H9Q2 264 aaPredicted RBP20.3■□□□□ 0.84
C9orf3-208ENST00000451893 XPR1Q9UBH6 696 aa20.3■□□□□ 0.84
C9orf3-208ENST00000451893 RNF112Q9ULX5 631 aa20.3■□□□□ 0.84
C9orf3-208ENST00000451893 GABRR3A8MPY1 467 aa20.29■□□□□ 0.84
C9orf3-208ENST00000451893 TMEM114B3SHH9 223 aa20.29■□□□□ 0.84
C9orf3-208ENST00000451893 SNNO75324 88 aaPredicted RBP20.29■□□□□ 0.84
C9orf3-208ENST00000451893 CLDN1O95832 211 aa20.29■□□□□ 0.84
C9orf3-208ENST00000451893 SBK3P0C264 359 aa20.29■□□□□ 0.84
C9orf3-208ENST00000451893 TUBA3CQ13748 450 aa20.29■□□□□ 0.84
C9orf3-208ENST00000451893 OR1C1Q15619 314 aa20.29■□□□□ 0.84
C9orf3-208ENST00000451893 C18orf21Q32NC0 220 aaPredicted RBP20.29■□□□□ 0.84
C9orf3-208ENST00000451893 TUBA3EQ6PEY2 450 aa20.29■□□□□ 0.84
C9orf3-208ENST00000451893 GAL3ST3Q96A11 431 aa20.29■□□□□ 0.84
C9orf3-208ENST00000451893 CDCP1Q9H5V8 836 aa20.29■□□□□ 0.84
C9orf3-208ENST00000451893 PRDM9Q9NQV7 894 aa20.29■□□□□ 0.84
C9orf3-208ENST00000451893 DNAJC11Q9NVH1 559 aa20.29■□□□□ 0.84
C9orf3-208ENST00000451893 FGFR1OP2Q9NVK5 253 aa20.29■□□□□ 0.84
C9orf3-208ENST00000451893 GPRC5BQ9NZH0 403 aa20.29■□□□□ 0.84
C9orf3-208ENST00000451893 CPSF2Q9P2I0 782 aaKnown RBP20.29■□□□□ 0.84
C9orf3-208ENST00000451893 SH3BGRL2Q9UJC5 107 aa20.29■□□□□ 0.84
C9orf3-208ENST00000451893 MRPS33Q9Y291 106 aaKnown RBP20.29■□□□□ 0.84
C9orf3-208ENST00000451893 WIPF3A6NGB9 483 aa20.28■□□□□ 0.84
C9orf3-208ENST00000451893 A8MUA0 341 aa20.28■□□□□ 0.84
C9orf3-208ENST00000451893 ERI3O43414 337 aaKnown RBP20.28■□□□□ 0.84
C9orf3-208ENST00000451893 CCNT2O60583 730 aaKnown RBP20.28■□□□□ 0.84
C9orf3-208ENST00000451893 SMIM24O75264 130 aa20.28■□□□□ 0.84
C9orf3-208ENST00000451893 MAOAP21397 527 aa20.28■□□□□ 0.84
C9orf3-208ENST00000451893 COL8A1P27658 744 aa20.28■□□□□ 0.84
C9orf3-208ENST00000451893 GSTM2P28161 218 aa20.28■□□□□ 0.84
C9orf3-208ENST00000451893 PMP22Q01453 160 aa20.28■□□□□ 0.84
C9orf3-208ENST00000451893 TGM3Q08188 693 aa20.28■□□□□ 0.84
C9orf3-208ENST00000451893 BST1Q10588 318 aa20.28■□□□□ 0.84
C9orf3-208ENST00000451893 HIST2H2ACQ16777 129 aaPredicted RBP20.28■□□□□ 0.84
C9orf3-208ENST00000451893 XKR6Q5GH73 641 aa20.28■□□□□ 0.84
C9orf3-208ENST00000451893 HIST2H2AA3Q6FI13 130 aa20.28■□□□□ 0.84
C9orf3-208ENST00000451893 SULT1C3Q6IMI6 304 aa20.28■□□□□ 0.84
C9orf3-208ENST00000451893 TRIM40Q6P9F5 258 aa20.28■□□□□ 0.84
C9orf3-208ENST00000451893 MECRQ9BV79 373 aa20.28■□□□□ 0.84
C9orf3-208ENST00000451893 FAM107BQ9H098 131 aa20.28■□□□□ 0.84
C9orf3-208ENST00000451893 KLHL31Q9H511 634 aa20.28■□□□□ 0.84
C9orf3-208ENST00000451893 POLEQ07864 2286 aa20.27■□□□□ 0.84
C9orf3-208ENST00000451893 A0A0G2JN53 185 aa20.27■□□□□ 0.84
C9orf3-208ENST00000451893 CLDN4O14493 209 aa20.27■□□□□ 0.84
C9orf3-208ENST00000451893 FCHO1O14526 889 aa20.27■□□□□ 0.84
C9orf3-208ENST00000451893 B3GALT2O43825 422 aa20.27■□□□□ 0.84
C9orf3-208ENST00000451893 DLX3O60479 287 aa20.27■□□□□ 0.84
C9orf3-208ENST00000451893 KERAO60938 352 aa20.27■□□□□ 0.84
C9orf3-208ENST00000451893 STK16O75716 305 aa20.27■□□□□ 0.84
C9orf3-208ENST00000451893 STSP08842 583 aa20.27■□□□□ 0.84
C9orf3-208ENST00000451893 TROVE2P10155 538 aaKnown RBP eCLIP20.27■□□□□ 0.84
C9orf3-208ENST00000451893 GMPRP36959 345 aa20.27■□□□□ 0.84
C9orf3-208ENST00000451893 HSPA7P48741 367 aa20.27■□□□□ 0.84
C9orf3-208ENST00000451893 ST13P50502 369 aaKnown RBP20.27■□□□□ 0.84
C9orf3-208ENST00000451893 BTG2P78543 158 aa20.27■□□□□ 0.84
C9orf3-208ENST00000451893 PAGE2BQ5JRK9 111 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms