RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 SLC22A10Q63ZE4 541 aa11.54□□□□□ -0.56
AC004540.1-204ENST00000449537 CAPN13Q6MZZ7 669 aaPredicted RBP11.54□□□□□ -0.56
AC004540.1-204ENST00000449537 OPN5Q6U736 354 aa11.54□□□□□ -0.56
AC004540.1-204ENST00000449537 C12orf54Q6X4T0 127 aa11.54□□□□□ -0.56
AC004540.1-204ENST00000449537 HSDL2Q6YN16 418 aa11.54□□□□□ -0.56
AC004540.1-204ENST00000449537 LRRC25Q8N386 305 aaPredicted RBP11.54□□□□□ -0.56
AC004540.1-204ENST00000449537 AFAP1L2Q8N4X5 818 aa11.54□□□□□ -0.56
AC004540.1-204ENST00000449537 PPHLN1Q8NEY8 458 aaKnown RBP11.54□□□□□ -0.56
AC004540.1-204ENST00000449537 ZNF480Q8WV37 535 aa11.54□□□□□ -0.56
AC004540.1-204ENST00000449537 SREK1Q8WXA9 508 aaKnown RBP11.54□□□□□ -0.56
AC004540.1-204ENST00000449537 PIGQQ9BRB3 760 aa11.54□□□□□ -0.56
AC004540.1-204ENST00000449537 SFXN3Q9BWM7 321 aa11.54□□□□□ -0.56
AC004540.1-204ENST00000449537 PRDM14Q9GZV8 571 aa11.54□□□□□ -0.56
AC004540.1-204ENST00000449537 SHARPINQ9H0F6 387 aa11.54□□□□□ -0.56
AC004540.1-204ENST00000449537 PIGMQ9H3S5 423 aa11.54□□□□□ -0.56
AC004540.1-204ENST00000449537 SH2D2AQ9NP31 389 aa11.54□□□□□ -0.56
AC004540.1-204ENST00000449537 FAM114A2Q9NRY5 505 aa11.54□□□□□ -0.56
AC004540.1-204ENST00000449537 PIH1D1Q9NWS0 290 aaKnown RBP11.54□□□□□ -0.56
AC004540.1-204ENST00000449537 TMEM160Q9NX00 188 aa11.54□□□□□ -0.56
AC004540.1-204ENST00000449537 PSD3Q9NYI0 1048 aa11.54□□□□□ -0.56
AC004540.1-204ENST00000449537 ANAPC5Q9UJX4 755 aa11.54□□□□□ -0.56
AC004540.1-204ENST00000449537 NINQ8N4C6 2090 aa11.53□□□□□ -0.56
AC004540.1-204ENST00000449537 NCKAP5O14513 1909 aa11.53□□□□□ -0.56
AC004540.1-204ENST00000449537 SNPHO15079 494 aa11.53□□□□□ -0.56
AC004540.1-204ENST00000449537 LCMT2O60294 686 aaKnown RBP11.53□□□□□ -0.56
AC004540.1-204ENST00000449537 CEP104O60308 925 aa11.53□□□□□ -0.56
AC004540.1-204ENST00000449537 URI1O94763 535 aaPredicted RBP11.53□□□□□ -0.56
AC004540.1-204ENST00000449537 FGGP02679 453 aa11.53□□□□□ -0.56
AC004540.1-204ENST00000449537 ALOX12P18054 663 aa11.53□□□□□ -0.56
AC004540.1-204ENST00000449537 COILP38432 576 aaPredicted RBP11.53□□□□□ -0.56
AC004540.1-204ENST00000449537 KCNJ2P63252 427 aa11.53□□□□□ -0.56
AC004540.1-204ENST00000449537 FAM27E3Q08E93 113 aa11.53□□□□□ -0.56
AC004540.1-204ENST00000449537 DRICH1Q6PGQ1 229 aaPredicted RBP11.53□□□□□ -0.56
AC004540.1-204ENST00000449537 LDB1Q86U70 411 aaPredicted RBP11.53□□□□□ -0.56
AC004540.1-204ENST00000449537 C9orf106Q8NAJ2 232 aa11.53□□□□□ -0.56
AC004540.1-204ENST00000449537 ZNF740Q8NDX6 193 aa11.53□□□□□ -0.56
AC004540.1-204ENST00000449537 MNS1Q8NEH6 495 aa11.53□□□□□ -0.56
AC004540.1-204ENST00000449537 OR13J1Q8NGT2 312 aa11.53□□□□□ -0.56
AC004540.1-204ENST00000449537 TRMT61AQ96FX7 289 aaKnown RBP11.53□□□□□ -0.56
AC004540.1-204ENST00000449537 CLK4Q9HAZ1 481 aaKnown RBP11.53□□□□□ -0.56
AC004540.1-204ENST00000449537 MGAM2Q2M2H8 2515 aa11.52□□□□□ -0.56
AC004540.1-204ENST00000449537 A0A0G2JK05 382 aa11.52□□□□□ -0.57
AC004540.1-204ENST00000449537 CCDC188H7C350 402 aa11.52□□□□□ -0.57
AC004540.1-204ENST00000449537 PSIP1O75475 530 aaKnown RBP11.52□□□□□ -0.57
AC004540.1-204ENST00000449537 B3GALT4O96024 378 aa11.52□□□□□ -0.57
AC004540.1-204ENST00000449537 CATP04040 527 aaKnown RBP11.52□□□□□ -0.57
AC004540.1-204ENST00000449537 PGRP06401 933 aa11.52□□□□□ -0.57
AC004540.1-204ENST00000449537 RNH1P13489 461 aaKnown RBP11.52□□□□□ -0.57
AC004540.1-204ENST00000449537 EGR1P18146 543 aa11.52□□□□□ -0.57
AC004540.1-204ENST00000449537 CHRM3P20309 590 aa11.52□□□□□ -0.57
AC004540.1-204ENST00000449537 HK2P52789 917 aa11.52□□□□□ -0.57
AC004540.1-204ENST00000449537 TBL3Q12788 808 aaKnown RBP11.52□□□□□ -0.57
AC004540.1-204ENST00000449537 BMPR2Q13873 1038 aa11.52□□□□□ -0.57
AC004540.1-204ENST00000449537 RCAN2Q14206 197 aa11.52□□□□□ -0.57
AC004540.1-204ENST00000449537 PHKG1Q16816 387 aa11.52□□□□□ -0.57
AC004540.1-204ENST00000449537 AARS2Q5JTZ9 985 aaKnown RBP11.52□□□□□ -0.57
AC004540.1-204ENST00000449537 VASNQ6EMK4 673 aa11.52□□□□□ -0.57
AC004540.1-204ENST00000449537 ZNF534Q76KX8 674 aa11.52□□□□□ -0.57
AC004540.1-204ENST00000449537 ZNF572Q7Z3I7 529 aaPredicted RBP11.52□□□□□ -0.57
AC004540.1-204ENST00000449537 CDKL3Q8IVW4 592 aaPredicted RBP11.52□□□□□ -0.57
AC004540.1-204ENST00000449537 SLC22A8Q8TCC7 542 aa11.52□□□□□ -0.57
AC004540.1-204ENST00000449537 JSRP1Q96MG2 331 aaPredicted RBP11.52□□□□□ -0.57
AC004540.1-204ENST00000449537 ZFP3Q96NJ6 502 aa11.52□□□□□ -0.57
AC004540.1-204ENST00000449537 ANGPTL4Q9BY76 406 aa11.52□□□□□ -0.57
AC004540.1-204ENST00000449537 ADAM19Q9H013 955 aa11.52□□□□□ -0.57
AC004540.1-204ENST00000449537 RHBGQ9H310 441 aa11.52□□□□□ -0.57
AC004540.1-204ENST00000449537 SLC2A6Q9UGQ3 507 aa11.52□□□□□ -0.57
AC004540.1-204ENST00000449537 MMACHCQ9Y4U1 282 aa11.52□□□□□ -0.57
AC004540.1-204ENST00000449537 GPRIN2O60269 458 aa11.51□□□□□ -0.57
AC004540.1-204ENST00000449537 TRAPPC6AO75865 159 aa11.51□□□□□ -0.57
AC004540.1-204ENST00000449537 SYF2O95926 243 aaKnown RBP11.51□□□□□ -0.57
AC004540.1-204ENST00000449537 LOXP28300 417 aaPredicted RBP11.51□□□□□ -0.57
AC004540.1-204ENST00000449537 ATP5DP30049 168 aa11.51□□□□□ -0.57
AC004540.1-204ENST00000449537 GRK3P35626 688 aa11.51□□□□□ -0.57
AC004540.1-204ENST00000449537 CPOXP36551 454 aa11.51□□□□□ -0.57
AC004540.1-204ENST00000449537 FNTAP49354 379 aa11.51□□□□□ -0.57
AC004540.1-204ENST00000449537 TTPAP49638 278 aa11.51□□□□□ -0.57
AC004540.1-204ENST00000449537 EIF3BP55884 814 aaKnown RBP11.51□□□□□ -0.57
AC004540.1-204ENST00000449537 EEF1A1P68104 462 aaKnown RBP11.51□□□□□ -0.57
AC004540.1-204ENST00000449537 EEF1A1P5Q5VTE0 462 aa11.51□□□□□ -0.57
AC004540.1-204ENST00000449537 KLHDC8BQ8IXV7 354 aa11.51□□□□□ -0.57
AC004540.1-204ENST00000449537 LRRC56Q8IYG6 542 aaPredicted RBP11.51□□□□□ -0.57
AC004540.1-204ENST00000449537 MFSD9Q8NBP5 474 aa11.51□□□□□ -0.57
AC004540.1-204ENST00000449537 SGMS2Q8NHU3 365 aa11.51□□□□□ -0.57
AC004540.1-204ENST00000449537 SLC44A1Q8WWI5 657 aa11.51□□□□□ -0.57
AC004540.1-204ENST00000449537 ART5Q96L15 291 aa11.51□□□□□ -0.57
AC004540.1-204ENST00000449537 MARK4Q96L34 752 aa11.51□□□□□ -0.57
AC004540.1-204ENST00000449537 TM9SF2Q99805 663 aa11.51□□□□□ -0.57
AC004540.1-204ENST00000449537 SGPP1Q9BX95 441 aa11.51□□□□□ -0.57
AC004540.1-204ENST00000449537 LRRC40Q9H9A6 602 aa11.51□□□□□ -0.57
AC004540.1-204ENST00000449537 WIF1Q9Y5W5 379 aa11.51□□□□□ -0.57
AC004540.1-204ENST00000449537 LRRC3CA6NJW4 275 aa11.5□□□□□ -0.57
AC004540.1-204ENST00000449537 ZNF354AO60765 605 aaPredicted RBP11.5□□□□□ -0.57
AC004540.1-204ENST00000449537 RCBTB2O95199 551 aa11.5□□□□□ -0.57
AC004540.1-204ENST00000449537 SRD5A1P18405 259 aa11.5□□□□□ -0.57
AC004540.1-204ENST00000449537 GDF1P27539 372 aa11.5□□□□□ -0.57
AC004540.1-204ENST00000449537 PPP2R1BP30154 601 aa11.5□□□□□ -0.57
AC004540.1-204ENST00000449537 CXCR5P32302 372 aa11.5□□□□□ -0.57
AC004540.1-204ENST00000449537 ACVR1BP36896 505 aa11.5□□□□□ -0.57
AC004540.1-204ENST00000449537 PCYT1AP49585 367 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms