RNA–Protein interactions for RNA: ENST00000449530.2

LSP1P3-201, Transcript of LSP1 pseudogene 3, humanhuman

BASIC

Gene LSP1P3, Length 208 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P3-201ENST00000449530 EMCNQ9ULC0 261 aa11.17□□□□□ -0.62
LSP1P3-201ENST00000449530 CLDN16Q9Y5I7 305 aa11.17□□□□□ -0.62
LSP1P3-201ENST00000449530 MYOCOSA0A1B0GUC4 107 aa11.16□□□□□ -0.62
LSP1P3-201ENST00000449530 PPP6CO00743 305 aa11.16□□□□□ -0.62
LSP1P3-201ENST00000449530 MAN1A2O60476 641 aa11.16□□□□□ -0.62
LSP1P3-201ENST00000449530 LDB3O75112 727 aa11.16□□□□□ -0.62
LSP1P3-201ENST00000449530 CDH16O75309 829 aa11.16□□□□□ -0.62
LSP1P3-201ENST00000449530 VPS4BO75351 444 aa11.16□□□□□ -0.62
LSP1P3-201ENST00000449530 EEDO75530 441 aaKnown RBP11.16□□□□□ -0.62
LSP1P3-201ENST00000449530 SUPT7LO94864 414 aa11.16□□□□□ -0.62
LSP1P3-201ENST00000449530 PTX3P26022 381 aaPredicted RBP11.16□□□□□ -0.62
LSP1P3-201ENST00000449530 TSFMP43897 325 aaKnown RBP11.16□□□□□ -0.62
LSP1P3-201ENST00000449530 UQCRFS1P47985 274 aa11.16□□□□□ -0.62
LSP1P3-201ENST00000449530 ST13P50502 369 aaKnown RBP11.16□□□□□ -0.62
LSP1P3-201ENST00000449530 TNFSF10P50591 281 aa11.16□□□□□ -0.62
LSP1P3-201ENST00000449530 TNFRSF17Q02223 184 aa11.16□□□□□ -0.62
LSP1P3-201ENST00000449530 ID2Q02363 134 aa11.16□□□□□ -0.62
LSP1P3-201ENST00000449530 CLCQ05315 142 aa11.16□□□□□ -0.62
LSP1P3-201ENST00000449530 SLAMF1Q13291 335 aa11.16□□□□□ -0.62
LSP1P3-201ENST00000449530 CUL3Q13618 768 aa11.16□□□□□ -0.62
LSP1P3-201ENST00000449530 UNC50Q53HI1 259 aa11.16□□□□□ -0.62
LSP1P3-201ENST00000449530 ACER2Q5QJU3 275 aa11.16□□□□□ -0.62
LSP1P3-201ENST00000449530 ZNF678Q5SXM1 525 aa11.16□□□□□ -0.62
LSP1P3-201ENST00000449530 NUDT13Q86X67 352 aa11.16□□□□□ -0.62
LSP1P3-201ENST00000449530 C4orf33Q8N1A6 199 aa11.16□□□□□ -0.62
LSP1P3-201ENST00000449530 ZCCHC7Q8N3Z6 543 aaKnown RBP11.16□□□□□ -0.62
LSP1P3-201ENST00000449530 SLC5A8Q8N695 610 aa11.16□□□□□ -0.62
LSP1P3-201ENST00000449530 SNRNP40Q96DI7 357 aaKnown RBP11.16□□□□□ -0.62
LSP1P3-201ENST00000449530 ZNF354BQ96LW1 612 aa11.16□□□□□ -0.62
LSP1P3-201ENST00000449530 SERPINI1Q99574 410 aa11.16□□□□□ -0.62
LSP1P3-201ENST00000449530 NPAS2Q99743 824 aa11.16□□□□□ -0.62
LSP1P3-201ENST00000449530 ZNF717Q9BY31 904 aaPredicted RBP11.16□□□□□ -0.62
LSP1P3-201ENST00000449530 SLC29A3Q9BZD2 475 aa11.16□□□□□ -0.62
LSP1P3-201ENST00000449530 RNF32Q9H0A6 362 aa11.16□□□□□ -0.62
LSP1P3-201ENST00000449530 ADAP2Q9NPF8 381 aa11.16□□□□□ -0.62
LSP1P3-201ENST00000449530 ASF1BQ9NVP2 202 aa11.16□□□□□ -0.62
LSP1P3-201ENST00000449530 KCMF1Q9P0J7 381 aa11.16□□□□□ -0.62
LSP1P3-201ENST00000449530 ABI3Q9P2A4 366 aa11.16□□□□□ -0.62
LSP1P3-201ENST00000449530 DCDC2Q9UHG0 476 aa11.16□□□□□ -0.62
LSP1P3-201ENST00000449530 PHF11Q9UIL8 331 aa11.16□□□□□ -0.62
LSP1P3-201ENST00000449530 VPS4AQ9UN37 437 aa11.16□□□□□ -0.62
LSP1P3-201ENST00000449530 NTNG1Q9Y2I2 539 aa11.16□□□□□ -0.62
LSP1P3-201ENST00000449530 FLNCQ14315 2725 aa11.15□□□□□ -0.62
LSP1P3-201ENST00000449530 NBPF19A0A087WUL8 3843 aa11.15□□□□□ -0.62
LSP1P3-201ENST00000449530 A0A0A6YYD5 115 aa11.15□□□□□ -0.62
LSP1P3-201ENST00000449530 TRAV17A0A0B4J275 112 aa11.15□□□□□ -0.62
LSP1P3-201ENST00000449530 TRBV11-1A0A0K0K1C0 115 aa11.15□□□□□ -0.62
LSP1P3-201ENST00000449530 TLDC2A0PJX2 215 aa11.15□□□□□ -0.62
LSP1P3-201ENST00000449530 OR5H15A6NDH6 313 aa11.15□□□□□ -0.62
LSP1P3-201ENST00000449530 FOXE1O00358 373 aaPredicted RBP11.15□□□□□ -0.62
LSP1P3-201ENST00000449530 CTNSO60931 367 aa11.15□□□□□ -0.62
LSP1P3-201ENST00000449530 PRKRAO75569 313 aaKnown RBP11.15□□□□□ -0.62
LSP1P3-201ENST00000449530 OR4F21O95013 312 aa11.15□□□□□ -0.62
LSP1P3-201ENST00000449530 SEMA3DO95025 777 aa11.15□□□□□ -0.62
LSP1P3-201ENST00000449530 PROCP04070 461 aa11.15□□□□□ -0.62
LSP1P3-201ENST00000449530 IFNA16P05015 189 aa11.15□□□□□ -0.62
LSP1P3-201ENST00000449530 MYL2P10916 166 aa11.15□□□□□ -0.62
LSP1P3-201ENST00000449530 GNLYP22749 145 aa11.15□□□□□ -0.62
LSP1P3-201ENST00000449530 BSGP35613 385 aa11.15□□□□□ -0.62
LSP1P3-201ENST00000449530 PRKAA2P54646 552 aa11.15□□□□□ -0.62
LSP1P3-201ENST00000449530 HNRNPH2P55795 449 aaKnown RBP11.15□□□□□ -0.62
LSP1P3-201ENST00000449530 IFFO1Q0D2I5 559 aa11.15□□□□□ -0.62
LSP1P3-201ENST00000449530 STX4Q12846 297 aa11.15□□□□□ -0.62
LSP1P3-201ENST00000449530 UBAP2LQ14157 1087 aaKnown RBP11.15□□□□□ -0.62
LSP1P3-201ENST00000449530 TERF2Q15554 542 aa11.15□□□□□ -0.62
LSP1P3-201ENST00000449530 ELAVL1Q15717 326 aaKnown RBP11.15□□□□□ -0.62
LSP1P3-201ENST00000449530 MEP1AQ16819 746 aa11.15□□□□□ -0.62
LSP1P3-201ENST00000449530 ERCC6LQ2NKX8 1250 aa11.15□□□□□ -0.62
LSP1P3-201ENST00000449530 TCHHL1Q5QJ38 904 aaPredicted RBP11.15□□□□□ -0.62
LSP1P3-201ENST00000449530 WDR93Q6P2C0 686 aa11.15□□□□□ -0.62
LSP1P3-201ENST00000449530 EMBQ6PCB8 327 aa11.15□□□□□ -0.62
LSP1P3-201ENST00000449530 CYP20A1Q6UW02 462 aa11.15□□□□□ -0.62
LSP1P3-201ENST00000449530 ZYG11AQ6WRX3 759 aa11.15□□□□□ -0.62
LSP1P3-201ENST00000449530 GPRIN3Q6ZVF9 776 aa11.15□□□□□ -0.62
LSP1P3-201ENST00000449530 GPR180Q86V85 440 aa11.15□□□□□ -0.62
LSP1P3-201ENST00000449530 SLC22A9Q8IVM8 553 aa11.15□□□□□ -0.62
LSP1P3-201ENST00000449530 CDYL2Q8N8U2 506 aa11.15□□□□□ -0.62
LSP1P3-201ENST00000449530 GALNT11Q8NCW6 608 aa11.15□□□□□ -0.62
LSP1P3-201ENST00000449530 NFAM1Q8NET5 270 aaPredicted RBP11.15□□□□□ -0.62
LSP1P3-201ENST00000449530 B3GNT7Q8NFL0 401 aa11.15□□□□□ -0.62
LSP1P3-201ENST00000449530 OR1N1Q8NGS0 311 aa11.15□□□□□ -0.62
LSP1P3-201ENST00000449530 ELP5Q8TE02 316 aa11.15□□□□□ -0.62
LSP1P3-201ENST00000449530 L3HYPDHQ96EM0 354 aa11.15□□□□□ -0.62
LSP1P3-201ENST00000449530 ZNF382Q96SR6 550 aa11.15□□□□□ -0.62
LSP1P3-201ENST00000449530 HBEGFQ99075 208 aa11.15□□□□□ -0.62
LSP1P3-201ENST00000449530 C12orf65Q9H3J6 166 aaKnown RBP11.15□□□□□ -0.62
LSP1P3-201ENST00000449530 FARSBQ9NSD9 589 aaKnown RBP11.15□□□□□ -0.62
LSP1P3-201ENST00000449530 LYARQ9NX58 379 aaKnown RBP11.15□□□□□ -0.62
LSP1P3-201ENST00000449530 ANKRD10Q9NXR5 420 aa11.15□□□□□ -0.62
LSP1P3-201ENST00000449530 STMN3Q9NZ72 180 aa11.15□□□□□ -0.62
LSP1P3-201ENST00000449530 TRPS1Q9UHF7 1281 aa11.15□□□□□ -0.62
LSP1P3-201ENST00000449530 COPG1Q9Y678 874 aaKnown RBP11.15□□□□□ -0.62
LSP1P3-201ENST00000449530 BLACEA4D250 179 aa11.14□□□□□ -0.63
LSP1P3-201ENST00000449530 GABRR3A8MPY1 467 aa11.14□□□□□ -0.63
LSP1P3-201ENST00000449530 G3V2L1 256 aa11.14□□□□□ -0.63
LSP1P3-201ENST00000449530 COPEO14579 308 aa11.14□□□□□ -0.63
LSP1P3-201ENST00000449530 TMPRSS11DO60235 418 aa11.14□□□□□ -0.63
LSP1P3-201ENST00000449530 FGF17O60258 216 aa11.14□□□□□ -0.63
LSP1P3-201ENST00000449530 PDYNP01213 254 aa11.14□□□□□ -0.63
LSP1P3-201ENST00000449530 GBAP04062 536 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms