RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 BBOF1Q8ND07 529 aa26.27■■□□□ 1.8
CBX4-202ENST00000448310 PTPMT1Q8WUK0 201 aaPredicted RBP26.27■■□□□ 1.8
CBX4-202ENST00000448310 EFCAB11Q9BUY7 163 aa26.27■■□□□ 1.8
CBX4-202ENST00000448310 PRM3Q9NNZ6 103 aa26.27■■□□□ 1.8
CBX4-202ENST00000448310 COQ3Q9NZJ6 369 aa26.27■■□□□ 1.8
CBX4-202ENST00000448310 MYOTQ9UBF9 498 aa26.27■■□□□ 1.8
CBX4-202ENST00000448310 RNF112Q9ULX5 631 aa26.27■■□□□ 1.8
CBX4-202ENST00000448310 A0A0G2JMM0 328 aa26.26■■□□□ 1.79
CBX4-202ENST00000448310 A0A1W2PPB8 328 aa26.26■■□□□ 1.79
CBX4-202ENST00000448310 A0A1W2PRS3 328 aa26.26■■□□□ 1.79
CBX4-202ENST00000448310 FAM166BA8MTA8 275 aa26.26■■□□□ 1.79
CBX4-202ENST00000448310 KIR3DP1A8MWS1 328 aa26.26■■□□□ 1.79
CBX4-202ENST00000448310 G3V3Y1 287 aa26.26■■□□□ 1.79
CBX4-202ENST00000448310 RTCAO00442 366 aaKnown RBP26.26■■□□□ 1.79
CBX4-202ENST00000448310 LDB3O75112 727 aa26.26■■□□□ 1.79
CBX4-202ENST00000448310 GP5P40197 560 aa26.26■■□□□ 1.79
CBX4-202ENST00000448310 MSH2P43246 934 aa26.26■■□□□ 1.79
CBX4-202ENST00000448310 KCNC1P48547 511 aa26.26■■□□□ 1.79
CBX4-202ENST00000448310 ID2Q02363 134 aa26.26■■□□□ 1.79
CBX4-202ENST00000448310 IRF8Q02556 426 aa26.26■■□□□ 1.79
CBX4-202ENST00000448310 TGM3Q08188 693 aa26.26■■□□□ 1.79
CBX4-202ENST00000448310 STX4Q12846 297 aa26.26■■□□□ 1.79
CBX4-202ENST00000448310 ILF2Q12905 390 aaKnown RBP26.26■■□□□ 1.79
CBX4-202ENST00000448310 CALCOCO2Q13137 446 aa26.26■■□□□ 1.79
CBX4-202ENST00000448310 HSDL2Q6YN16 418 aa26.26■■□□□ 1.79
CBX4-202ENST00000448310 RASL10BQ96S79 203 aa26.26■■□□□ 1.79
CBX4-202ENST00000448310 MAPKAP1Q9BPZ7 522 aa26.26■■□□□ 1.79
CBX4-202ENST00000448310 OR8D2Q9GZM6 311 aa26.26■■□□□ 1.79
CBX4-202ENST00000448310 VTI1BQ9UEU0 232 aa26.26■■□□□ 1.79
CBX4-202ENST00000448310 HCFC1P51610 2035 aa26.26■■□□□ 1.79
CBX4-202ENST00000448310 PHF3Q92576 2039 aaKnown RBP26.26■■□□□ 1.79
CBX4-202ENST00000448310 INTS1Q8N201 2190 aaKnown RBP26.25■■□□□ 1.79
CBX4-202ENST00000448310 FAM159BA6NKW6 160 aa26.25■■□□□ 1.79
CBX4-202ENST00000448310 S100BP04271 92 aaPredicted RBP26.25■■□□□ 1.79
CBX4-202ENST00000448310 SSTR2P30874 369 aa26.25■■□□□ 1.79
CBX4-202ENST00000448310 HK2P52789 917 aa26.25■■□□□ 1.79
CBX4-202ENST00000448310 RAB10P61026 200 aa26.25■■□□□ 1.79
CBX4-202ENST00000448310 RCN2Q14257 317 aa26.25■■□□□ 1.79
CBX4-202ENST00000448310 EFTUD2Q15029 972 aaKnown RBP eCLIP26.25■■□□□ 1.792e-7■■■■□ 23.9
CBX4-202ENST00000448310 ZKSCAN8Q15776 578 aaPredicted RBP26.25■■□□□ 1.79
CBX4-202ENST00000448310 RPRMLQ8N4K4 120 aa26.25■■□□□ 1.79
CBX4-202ENST00000448310 OR2M7Q8NG81 312 aa26.25■■□□□ 1.79
CBX4-202ENST00000448310 DAZLQ92904 295 aaKnown RBP26.25■■□□□ 1.79
CBX4-202ENST00000448310 KIAA1191Q96A73 305 aa26.25■■□□□ 1.79
CBX4-202ENST00000448310 UBXN10Q96LJ8 280 aa26.25■■□□□ 1.79
CBX4-202ENST00000448310 KCNC2Q96PR1 638 aa26.25■■□□□ 1.79
CBX4-202ENST00000448310 ERP44Q9BS26 406 aa26.25■■□□□ 1.79
CBX4-202ENST00000448310 MS4A8Q9BY19 250 aa26.25■■□□□ 1.79
CBX4-202ENST00000448310 ALG9Q9H6U8 611 aa26.25■■□□□ 1.79
CBX4-202ENST00000448310 PLSCR2Q9NRY7 297 aa26.25■■□□□ 1.79
CBX4-202ENST00000448310 WHRNQ9P202 907 aa26.25■■□□□ 1.79
CBX4-202ENST00000448310 ITGB1BP2Q9UKP3 347 aa26.25■■□□□ 1.79
CBX4-202ENST00000448310 FAM155BO75949 473 aa26.24■■□□□ 1.79
CBX4-202ENST00000448310 C1QAP02745 245 aa26.24■■□□□ 1.79
CBX4-202ENST00000448310 TNNI3P19429 210 aa26.24■■□□□ 1.79
CBX4-202ENST00000448310 GPX6P59796 221 aa26.24■■□□□ 1.79
CBX4-202ENST00000448310 PPIAP62937 165 aaKnown RBP26.24■■□□□ 1.79
CBX4-202ENST00000448310 PLGLB1Q02325 96 aa26.24■■□□□ 1.79
CBX4-202ENST00000448310 LAPTM5Q13571 262 aa26.24■■□□□ 1.79
CBX4-202ENST00000448310 HIST2H2ACQ16777 129 aaPredicted RBP26.24■■□□□ 1.79
CBX4-202ENST00000448310 ZNF750Q32MQ0 723 aa26.24■■□□□ 1.79
CBX4-202ENST00000448310 PAGE2BQ5JRK9 111 aa26.24■■□□□ 1.79
CBX4-202ENST00000448310 HIST2H2AA3Q6FI13 130 aa26.24■■□□□ 1.79
CBX4-202ENST00000448310 ARHGAP11AQ6P4F7 1023 aa26.24■■□□□ 1.79
CBX4-202ENST00000448310 MEX3BQ6ZN04 569 aaKnown RBP26.24■■□□□ 1.79
CBX4-202ENST00000448310 C3orf62Q6ZUJ4 267 aa26.24■■□□□ 1.79
CBX4-202ENST00000448310 CTAGE3PQ8IX95 158 aa26.24■■□□□ 1.79
CBX4-202ENST00000448310 GPALPP1Q8IXQ4 340 aa26.24■■□□□ 1.79
CBX4-202ENST00000448310 MORN4Q8NDC4 146 aa26.24■■□□□ 1.79
CBX4-202ENST00000448310 OR14A16Q8NHC5 309 aa26.24■■□□□ 1.79
CBX4-202ENST00000448310 ZNF473Q8WTR7 871 aaKnown RBP26.24■■□□□ 1.79
CBX4-202ENST00000448310 SPOCK3Q9BQ16 436 aa26.24■■□□□ 1.79
CBX4-202ENST00000448310 CD244Q9BZW8 370 aa26.24■■□□□ 1.79
CBX4-202ENST00000448310 ENKD1Q9H0I2 346 aa26.24■■□□□ 1.79
CBX4-202ENST00000448310 LYRM4Q9HD34 91 aa26.24■■□□□ 1.79
CBX4-202ENST00000448310 GRHL1Q9NZI5 618 aa26.24■■□□□ 1.79
CBX4-202ENST00000448310 RNF14Q9UBS8 474 aa26.24■■□□□ 1.79
CBX4-202ENST00000448310 PYCARDQ9ULZ3 195 aa26.24■■□□□ 1.79
CBX4-202ENST00000448310 C17orf105B2RV13 164 aa26.23■■□□□ 1.79
CBX4-202ENST00000448310 EIF3HO15372 352 aaKnown RBP eCLIP26.23■■□□□ 1.79
CBX4-202ENST00000448310 RAD51CO43502 376 aa26.23■■□□□ 1.79
CBX4-202ENST00000448310 PCNAP12004 261 aa26.23■■□□□ 1.79
CBX4-202ENST00000448310 ATP5A1P25705 553 aaKnown RBP26.23■■□□□ 1.79
CBX4-202ENST00000448310 DLG1Q12959 904 aa26.23■■□□□ 1.79
CBX4-202ENST00000448310 CMC1Q7Z7K0 106 aa26.23■■□□□ 1.79
CBX4-202ENST00000448310 ACOT4Q8N9L9 421 aa26.23■■□□□ 1.79
CBX4-202ENST00000448310 SLC2A12Q8TD20 617 aa26.23■■□□□ 1.79
CBX4-202ENST00000448310 ANKRD17O75179 2603 aaKnown RBP26.22■■□□□ 1.79
CBX4-202ENST00000448310 CELSR1Q9NYQ6 3014 aa26.22■■□□□ 1.79
CBX4-202ENST00000448310 FAM187AA6NFU0 413 aa26.22■■□□□ 1.79
CBX4-202ENST00000448310 SAP18O00422 153 aaKnown RBP26.22■■□□□ 1.79
CBX4-202ENST00000448310 ZNF354AO60765 605 aaPredicted RBP26.22■■□□□ 1.79
CBX4-202ENST00000448310 TGFB1P01137 390 aa26.22■■□□□ 1.79
CBX4-202ENST00000448310 TBCCQ15814 346 aa26.22■■□□□ 1.79
CBX4-202ENST00000448310 EMC4Q5J8M3 183 aa26.22■■□□□ 1.79
CBX4-202ENST00000448310 LRRC70Q7Z2Q7 622 aa26.22■■□□□ 1.79
CBX4-202ENST00000448310 SCYL1Q96KG9 808 aa26.22■■□□□ 1.79
CBX4-202ENST00000448310 TBCDQ9BTW9 1192 aa26.22■■□□□ 1.79
CBX4-202ENST00000448310 ROGDIQ9GZN7 287 aa26.22■■□□□ 1.79
CBX4-202ENST00000448310 TP63Q9H3D4 680 aaPredicted RBP26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms