RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 NOBOXO60393 691 aa8.64□□□□□ -1.03
NIPBL-202ENST00000448238 CHRM5P08912 532 aaPredicted RBP8.64□□□□□ -1.03
NIPBL-202ENST00000448238 ADRA2BP18089 450 aa8.64□□□□□ -1.03
NIPBL-202ENST00000448238 STK19P49842 368 aaPredicted RBP8.64□□□□□ -1.03
NIPBL-202ENST00000448238 RPS27AP62979 156 aaKnown RBP8.64□□□□□ -1.03
NIPBL-202ENST00000448238 UBA52P62987 128 aaKnown RBP8.64□□□□□ -1.03
NIPBL-202ENST00000448238 FMO1Q01740 532 aa8.64□□□□□ -1.03
NIPBL-202ENST00000448238 TNK1Q13470 666 aa8.64□□□□□ -1.03
NIPBL-202ENST00000448238 PPP1R26Q5T8A7 1209 aaPredicted RBP8.64□□□□□ -1.03
NIPBL-202ENST00000448238 DEFB106AQ8N104 65 aa8.64□□□□□ -1.03
NIPBL-202ENST00000448238 BRIX1Q8TDN6 353 aaKnown RBP8.64□□□□□ -1.03
NIPBL-202ENST00000448238 ERLEC1Q96DZ1 483 aa8.64□□□□□ -1.03
NIPBL-202ENST00000448238 CYP2S1Q96SQ9 504 aa8.64□□□□□ -1.03
NIPBL-202ENST00000448238 TP63Q9H3D4 680 aaPredicted RBP8.64□□□□□ -1.03
NIPBL-202ENST00000448238 DPEP3Q9H4B8 488 aa8.64□□□□□ -1.03
NIPBL-202ENST00000448238 GAR1Q9NY12 217 aaKnown RBP8.64□□□□□ -1.03
NIPBL-202ENST00000448238 HPSEQ9Y251 543 aa8.64□□□□□ -1.03
NIPBL-202ENST00000448238 HEATR5BQ9P2D3 2071 aa8.64□□□□□ -1.03
NIPBL-202ENST00000448238 TBL1XO60907 577 aa8.64□□□□□ -1.03
NIPBL-202ENST00000448238 H2BFMP0C1H6 154 aa8.64□□□□□ -1.03
NIPBL-202ENST00000448238 GAAP10253 952 aa8.64□□□□□ -1.03
NIPBL-202ENST00000448238 ERVK-24P63145 666 aa8.64□□□□□ -1.03
NIPBL-202ENST00000448238 ACSBG2Q5FVE4 666 aa8.64□□□□□ -1.03
NIPBL-202ENST00000448238 ZNF585AQ6P3V2 769 aa8.64□□□□□ -1.03
NIPBL-202ENST00000448238 GCNT2Q8N0V5 402 aa8.64□□□□□ -1.03
NIPBL-202ENST00000448238 OR4K15Q8NH41 348 aa8.64□□□□□ -1.03
NIPBL-202ENST00000448238 SLC2A14Q8TDB8 520 aa8.64□□□□□ -1.03
NIPBL-202ENST00000448238 LRCH3Q96II8 777 aa8.64□□□□□ -1.03
NIPBL-202ENST00000448238 BIRC8Q96P09 236 aa8.64□□□□□ -1.03
NIPBL-202ENST00000448238 LGMNQ99538 433 aa8.64□□□□□ -1.03
NIPBL-202ENST00000448238 HDHD5Q9BXW7 423 aa8.64□□□□□ -1.03
NIPBL-202ENST00000448238 LRRC19Q9H756 370 aa8.64□□□□□ -1.03
NIPBL-202ENST00000448238 ZCCHC3Q9NUD5 404 aaKnown RBP8.64□□□□□ -1.03
NIPBL-202ENST00000448238 ASB4Q9Y574 426 aa8.64□□□□□ -1.03
NIPBL-202ENST00000448238 ABCC2Q92887 1545 aa8.64□□□□□ -1.03
NIPBL-202ENST00000448238 NPEPPSL1A6NEC2 478 aa8.64□□□□□ -1.03
NIPBL-202ENST00000448238 CAPN5O15484 640 aaPredicted RBP8.64□□□□□ -1.03
NIPBL-202ENST00000448238 B4GAT1O43505 415 aa8.64□□□□□ -1.03
NIPBL-202ENST00000448238 RNF13O43567 381 aa8.64□□□□□ -1.03
NIPBL-202ENST00000448238 CYP2B6P20813 491 aa8.64□□□□□ -1.03
NIPBL-202ENST00000448238 HNRNPA0Q13151 305 aaKnown RBP8.64□□□□□ -1.03
NIPBL-202ENST00000448238 DPY19L2P1Q6NXN4 242 aa8.64□□□□□ -1.03
NIPBL-202ENST00000448238 SLC27A1Q6PCB7 646 aa8.64□□□□□ -1.03
NIPBL-202ENST00000448238 RFWD3Q6PCD5 774 aa8.64□□□□□ -1.03
NIPBL-202ENST00000448238 MBOAT1Q6ZNC8 495 aa8.64□□□□□ -1.03
NIPBL-202ENST00000448238 BBS12Q6ZW61 710 aa8.64□□□□□ -1.03
NIPBL-202ENST00000448238 SLC9A9Q8IVB4 645 aa8.64□□□□□ -1.03
NIPBL-202ENST00000448238 RHEBL1Q8TAI7 183 aa8.64□□□□□ -1.03
NIPBL-202ENST00000448238 ITM2CQ9NQX7 267 aa8.64□□□□□ -1.03
NIPBL-202ENST00000448238 PCDHB3Q9Y5E6 796 aa8.64□□□□□ -1.03
NIPBL-202ENST00000448238 GLYATL1P3A0A0U1RQE8 302 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 GJB6O95452 261 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 PROS1P07225 676 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 ITGB5P18084 799 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 AQP2P41181 271 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 HNRNPA3P51991 378 aaKnown RBP8.63□□□□□ -1.03
NIPBL-202ENST00000448238 TRMT10BQ6PF06 316 aaKnown RBP8.63□□□□□ -1.03
NIPBL-202ENST00000448238 OR6Q1Q8NGQ2 317 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 SLC5A11Q8WWX8 675 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 DUSP26Q9BV47 211 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 FAM124BQ9H5Z6 455 aaPredicted RBP8.63□□□□□ -1.03
NIPBL-202ENST00000448238 B4GALT7Q9UBV7 327 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 SLC22A14Q9Y267 594 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 ABCC10Q5T3U5 1492 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 TCRBV9S1A1TA0A576 114 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 NCBP2LA6PVI3 153 aaKnown RBP8.63□□□□□ -1.03
NIPBL-202ENST00000448238 SLC31A2O15432 143 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 ADORA2AP29274 412 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 DGKQP52824 942 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 RAB11AP62491 216 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 FLYWCH1Q4VC44 716 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 ZNF783Q6ZMS7 281 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 NOXA1Q86UR1 476 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 TXNDC5Q8NBS9 432 aaKnown RBP8.63□□□□□ -1.03
NIPBL-202ENST00000448238 ANGPTL6Q8NI99 470 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 ZNF596Q8TC21 504 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 ASB9Q96DX5 294 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 FEM1CQ96JP0 617 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 ULBP1Q9BZM6 244 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 ZNF586Q9NXT0 402 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 KLHL9Q9P2J3 617 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 HCN4Q9Y3Q4 1203 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 F5H5P2 479 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 GABARAPH6UMI1 98 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 GABARAPO95166 117 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 SPDEFO95238 335 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 CSNK2A2P19784 350 aaPredicted RBP8.63□□□□□ -1.03
NIPBL-202ENST00000448238 SUMO1P63165 101 aaKnown RBP8.63□□□□□ -1.03
NIPBL-202ENST00000448238 TROAPQ12815 778 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 MEP1BQ16820 701 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 TMEM126BQ8IUX1 230 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 CPA6Q8N4T0 437 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 FBXO15Q8NCQ5 510 aaPredicted RBP8.63□□□□□ -1.03
NIPBL-202ENST00000448238 ABHD11Q8NFV4 315 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 OR4D6Q8NGJ1 314 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 OR9A2Q8NGT5 310 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 KCNC2Q96PR1 638 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 PITHD1Q9GZP4 211 aaPredicted RBP8.63□□□□□ -1.03
NIPBL-202ENST00000448238 MINDY3Q9H8M7 445 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 GLOD4Q9HC38 313 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms