RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 GKN3PP0CG01 181 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 BMP2P12643 396 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 HSD3B1P14060 373 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 HSD3B2P26439 372 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 S100A12P80511 92 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 C22orf42Q6IC83 251 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 SLC29A4Q7RTT9 530 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 PM20D2Q8IYS1 436 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 TCEAL4Q96EI5 215 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 IMP4Q96G21 291 aaKnown RBP7.49□□□□□ -1.21
NEDD9-204ENST00000448183 PRR11Q96HE9 360 aaPredicted RBP7.49□□□□□ -1.21
NEDD9-204ENST00000448183 MAELQ96JY0 434 aaKnown RBP7.49□□□□□ -1.21
NEDD9-204ENST00000448183 CPNE5Q9HCH3 593 aa7.49□□□□□ -1.21
NEDD9-204ENST00000448183 COL14A1Q05707 1796 aaKnown RBP7.49□□□□□ -1.21
NEDD9-204ENST00000448183 BORCS7-ASMTA0A0B4J1R7 106 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 C12orf71A8MTZ7 269 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 A8MUA0 341 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 MEN1O00255 615 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 H2AFB2P0C5Z0 115 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 GTF2F2P13984 249 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 RGS19P49795 217 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 HERV-K104P61576 105 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 PPIGQ13427 754 aaKnown RBP eCLIP7.48□□□□□ -1.212e-8■■□□□ 11.7
NEDD9-204ENST00000448183 PLEKHN1Q494U1 663 aaPredicted RBP7.48□□□□□ -1.21
NEDD9-204ENST00000448183 SMYD5Q6GMV2 418 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 SPATC1Q76KD6 591 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 CEACAM19Q7Z692 300 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 KBTBD6Q86V97 674 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 KRTCAP2Q8N6L1 136 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 OR8S1Q8NH09 359 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 S100PBPQ96BU1 408 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 RBP7Q96R05 134 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 BCL7BQ9BQE9 202 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 ARL6Q9H0F7 186 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 POLMQ9NP87 494 aaPredicted RBP7.48□□□□□ -1.21
NEDD9-204ENST00000448183 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.48□□□□□ -1.21
NEDD9-204ENST00000448183 B4GALT6Q9UBX8 382 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 MAFFQ9ULX9 164 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 FAM208AQ9UK61 1670 aaKnown RBP7.48□□□□□ -1.21
NEDD9-204ENST00000448183 SMCO3A2RU48 225 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 AGAP5A6NIR3 686 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 AXIN1O15169 862 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 SNNO75324 88 aaPredicted RBP7.48□□□□□ -1.21
NEDD9-204ENST00000448183 TOXO94900 526 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 APOC3P02656 99 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 STATHP02808 62 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 GP1BBP13224 206 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 RPL10P27635 214 aaKnown RBP7.48□□□□□ -1.21
NEDD9-204ENST00000448183 TIA1P31483 386 aaKnown RBP eCLIP7.48□□□□□ -1.21
NEDD9-204ENST00000448183 PREPP48147 710 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 BMXP51813 675 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 GHRHRQ02643 423 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 LRRC37A5PQ49AS3 106 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 TMEM69Q5SWH9 247 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 SPRYD7Q5W111 196 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 STEAP4Q687X5 459 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 SUSD1Q6UWL2 747 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 LHFPL3Q86UP9 236 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 CMTM8Q8IZV2 173 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 C1orf74Q96LT6 269 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 MYRFLQ96LU7 910 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 TRIB3Q96RU7 358 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 SEZ6LQ9BYH1 1024 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 MTG2Q9H4K7 406 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 MYNNQ9NPC7 610 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 PCDHB16Q9NRJ7 776 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 ERVK13-1Q9NX77 482 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 RABL2AQ9UBK7 228 aaPredicted RBP7.48□□□□□ -1.21
NEDD9-204ENST00000448183 RABL2BQ9UNT1 228 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 ADAMTSL3P82987 1691 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 H3BSH0 61 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 S1PR4O95977 384 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 S1PR1P21453 382 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 CD40LGP29965 261 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 MLLT10P55197 1068 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 GPR17Q13304 367 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 NFATC2Q13469 925 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 NTRK2Q16620 822 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 CYP27C1Q4G0S4 372 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 CES4AQ5XG92 561 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 GTF2IRD2BQ6EKJ0 949 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 GDF6Q6KF10 455 aaPredicted RBP7.48□□□□□ -1.21
NEDD9-204ENST00000448183 RPL13AP3Q6NVV1 102 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 CTU1Q7Z7A3 348 aaKnown RBP7.48□□□□□ -1.21
NEDD9-204ENST00000448183 GTF2IRD2Q86UP8 949 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 TSPYL5Q86VY4 417 aaPredicted RBP7.48□□□□□ -1.21
NEDD9-204ENST00000448183 OR13J1Q8NGT2 312 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 OR6N2Q8NGY6 317 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 CYB5D2Q8WUJ1 264 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 TESCQ96BS2 214 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 HYLS1Q96M11 299 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 SYT4Q9H2B2 425 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 VRTNQ9H8Y1 702 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 RNF121Q9H920 327 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 NANSQ9NR45 359 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 EMC3Q9P0I2 261 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 MGAT4CQ9UBM8 478 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 STUB1Q9UNE7 303 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 GON4LQ3T8J9 2241 aa7.48□□□□□ -1.21
NEDD9-204ENST00000448183 WASHC1A8K0Z3 465 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms