RNA–Protein interactions for RNA: ENST00000447669.6

RFFL-206, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 2,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-206ENST00000447669 SEC16AO15027 2179 aa23.53■■□□□ 1.36
RFFL-206ENST00000447669 TRBV5-3A0A0A0MS03 114 aa23.53■■□□□ 1.36
RFFL-206ENST00000447669 IGHV5-10-1A0A0J9YXX1 117 aa23.53■■□□□ 1.36
RFFL-206ENST00000447669 GALR3O60755 368 aaPredicted RBP23.53■■□□□ 1.36
RFFL-206ENST00000447669 RDH16O75452 317 aa23.53■■□□□ 1.36
RFFL-206ENST00000447669 ANP32DO95626 131 aa23.53■■□□□ 1.36
RFFL-206ENST00000447669 C8orf89P0DMQ9 161 aa23.53■■□□□ 1.36
RFFL-206ENST00000447669 PCSK2P16519 638 aa23.53■■□□□ 1.36
RFFL-206ENST00000447669 TSFMP43897 325 aaKnown RBP23.53■■□□□ 1.36
RFFL-206ENST00000447669 TRA2BP62995 288 aaKnown RBP23.53■■□□□ 1.36
RFFL-206ENST00000447669 PRSS42Q7Z5A4 293 aa23.53■■□□□ 1.36
RFFL-206ENST00000447669 D2HGDHQ8N465 521 aa23.53■■□□□ 1.36
RFFL-206ENST00000447669 ANKRD27Q96NW4 1050 aa23.53■■□□□ 1.36
RFFL-206ENST00000447669 TMEM121BQ9BXQ6 578 aaPredicted RBP23.53■■□□□ 1.36
RFFL-206ENST00000447669 NLNQ9BYT8 704 aa23.53■■□□□ 1.36
RFFL-206ENST00000447669 ABCD2Q9UBJ2 740 aa23.53■■□□□ 1.36
RFFL-206ENST00000447669 CD300AQ9UGN4 299 aa23.53■■□□□ 1.36
RFFL-206ENST00000447669 A0A096LPI6 279 aa23.52■■□□□ 1.36
RFFL-206ENST00000447669 MYOCOSA0A1B0GUC4 107 aa23.52■■□□□ 1.36
RFFL-206ENST00000447669 FAM227AF5H4B4 570 aa23.52■■□□□ 1.36
RFFL-206ENST00000447669 B3GALT2O43825 422 aa23.52■■□□□ 1.36
RFFL-206ENST00000447669 ERAL1O75616 437 aaKnown RBP23.52■■□□□ 1.36
RFFL-206ENST00000447669 LDOC1O95751 146 aaPredicted RBP23.52■■□□□ 1.36
RFFL-206ENST00000447669 ZNF883P0CG24 379 aa23.52■■□□□ 1.36
RFFL-206ENST00000447669 CD59P13987 128 aa23.52■■□□□ 1.36
RFFL-206ENST00000447669 NELFEP18615 380 aaKnown RBP23.52■■□□□ 1.36
RFFL-206ENST00000447669 ARFIP1P53367 373 aa23.52■■□□□ 1.36
RFFL-206ENST00000447669 MANEAQ5SRI9 462 aa23.52■■□□□ 1.36
RFFL-206ENST00000447669 C1orf146Q5VVC0 180 aa23.52■■□□□ 1.36
RFFL-206ENST00000447669 OR4A15Q8NGL6 344 aa23.52■■□□□ 1.36
RFFL-206ENST00000447669 OR1L3Q8NH93 324 aa23.52■■□□□ 1.36
RFFL-206ENST00000447669 ZNF285Q96NJ3 590 aa23.52■■□□□ 1.36
RFFL-206ENST00000447669 SEMA5BQ9P283 1151 aa23.52■■□□□ 1.36
RFFL-206ENST00000447669 UTS2RQ9UKP6 389 aa23.52■■□□□ 1.36
RFFL-206ENST00000447669 DAPP1Q9UN19 280 aa23.52■■□□□ 1.36
RFFL-206ENST00000447669 HYKKA2RU49 373 aa23.52■■□□□ 1.36
RFFL-206ENST00000447669 FOXS1O43638 330 aa23.52■■□□□ 1.36
RFFL-206ENST00000447669 DNAJA2O60884 412 aa23.52■■□□□ 1.36
RFFL-206ENST00000447669 CASP9P55211 416 aa23.52■■□□□ 1.36
RFFL-206ENST00000447669 DUSP2Q05923 314 aa23.52■■□□□ 1.36
RFFL-206ENST00000447669 GAB1Q13480 694 aa23.52■■□□□ 1.36
RFFL-206ENST00000447669 LRIF1Q5T3J3 769 aa23.52■■□□□ 1.36
RFFL-206ENST00000447669 ZNF551Q7Z340 670 aaPredicted RBP23.52■■□□□ 1.36
RFFL-206ENST00000447669 PNPT1Q8TCS8 783 aaKnown RBP23.52■■□□□ 1.36
RFFL-206ENST00000447669 MTERF3Q96E29 417 aa23.52■■□□□ 1.36
RFFL-206ENST00000447669 CCDC115Q96NT0 180 aa23.52■■□□□ 1.36
RFFL-206ENST00000447669 EDEM2Q9BV94 578 aa23.52■■□□□ 1.36
RFFL-206ENST00000447669 ZNF768Q9H5H4 540 aaKnown RBP23.52■■□□□ 1.36
RFFL-206ENST00000447669 PARD6AQ9NPB6 346 aa23.52■■□□□ 1.36
RFFL-206ENST00000447669 ATAD3AQ9NVI7 634 aa23.52■■□□□ 1.36
RFFL-206ENST00000447669 L3MBTL1Q9Y468 752 aa23.52■■□□□ 1.36
RFFL-206ENST00000447669 TMEM184BQ9Y519 407 aaPredicted RBP23.52■■□□□ 1.36
RFFL-206ENST00000447669 SLC22A7Q9Y694 548 aa23.52■■□□□ 1.36
RFFL-206ENST00000447669 H3BMH7 237 aa23.51■■□□□ 1.35
RFFL-206ENST00000447669 HYAL3O43820 417 aaPredicted RBP23.51■■□□□ 1.35
RFFL-206ENST00000447669 HNRNPFP52597 415 aaKnown RBP23.51■■□□□ 1.35
RFFL-206ENST00000447669 SIM1P81133 766 aaPredicted RBP23.51■■□□□ 1.35
RFFL-206ENST00000447669 MAT1AQ00266 395 aaKnown RBP23.51■■□□□ 1.35
RFFL-206ENST00000447669 SYT16Q17RD7 645 aa23.51■■□□□ 1.35
RFFL-206ENST00000447669 CCDC157Q569K6 752 aa23.51■■□□□ 1.35
RFFL-206ENST00000447669 RUNDC3AQ59EK9 446 aa23.51■■□□□ 1.35
RFFL-206ENST00000447669 CYB5D1Q6P9G0 228 aa23.51■■□□□ 1.35
RFFL-206ENST00000447669 OR4N5Q8IXE1 308 aa23.51■■□□□ 1.35
RFFL-206ENST00000447669 C10orf67Q8IYJ2 551 aa23.51■■□□□ 1.35
RFFL-206ENST00000447669 TMEM52Q8NDY8 209 aa23.51■■□□□ 1.35
RFFL-206ENST00000447669 CCDC74BQ96LY2 380 aa23.51■■□□□ 1.35
RFFL-206ENST00000447669 THUMPD3Q9BV44 507 aaKnown RBP23.51■■□□□ 1.35
RFFL-206ENST00000447669 SEMA4GQ9NTN9 838 aa23.51■■□□□ 1.35
RFFL-206ENST00000447669 MAPRE3Q9UPY8 281 aa23.51■■□□□ 1.35
RFFL-206ENST00000447669 A0A1W2PRB8 838 aa23.5■■□□□ 1.35
RFFL-206ENST00000447669 RNASET2O00584 256 aaKnown RBP23.5■■□□□ 1.35
RFFL-206ENST00000447669 NVLO15381 856 aaKnown RBP23.5■■□□□ 1.35
RFFL-206ENST00000447669 NPPAP01160 153 aa23.5■■□□□ 1.35
RFFL-206ENST00000447669 CKMT2P17540 419 aa23.5■■□□□ 1.35
RFFL-206ENST00000447669 CPN2P22792 545 aa23.5■■□□□ 1.35
RFFL-206ENST00000447669 ME2P23368 584 aa23.5■■□□□ 1.35
RFFL-206ENST00000447669 RPL3P39023 403 aaKnown RBP23.5■■□□□ 1.35
RFFL-206ENST00000447669 FOXM1Q08050 763 aa23.5■■□□□ 1.35
RFFL-206ENST00000447669 SQSTM1Q13501 440 aa23.5■■□□□ 1.35
RFFL-206ENST00000447669 B3GNT8Q7Z7M8 397 aa23.5■■□□□ 1.35
RFFL-206ENST00000447669 GBP5Q96PP8 586 aa23.5■■□□□ 1.35
RFFL-206ENST00000447669 FAIM2Q9BWQ8 316 aa23.5■■□□□ 1.35
RFFL-206ENST00000447669 RBCK1Q9BYM8 510 aa23.5■■□□□ 1.35
RFFL-206ENST00000447669 ANKHQ9HCJ1 492 aa23.5■■□□□ 1.35
RFFL-206ENST00000447669 HCN3Q9P1Z3 774 aa23.5■■□□□ 1.35
RFFL-206ENST00000447669 EGFL7Q9UHF1 273 aa23.5■■□□□ 1.35
RFFL-206ENST00000447669 CES1P1Q9UKY3 287 aa23.5■■□□□ 1.35
RFFL-206ENST00000447669 GDF9O60383 454 aa23.5■■□□□ 1.35
RFFL-206ENST00000447669 ERN1O75460 977 aaKnown RBP23.5■■□□□ 1.35
RFFL-206ENST00000447669 OR2B3O76000 313 aa23.5■■□□□ 1.35
RFFL-206ENST00000447669 LIPEQ05469 1076 aa23.5■■□□□ 1.35
RFFL-206ENST00000447669 ANXA8L1Q5VT79 327 aa23.5■■□□□ 1.35
RFFL-206ENST00000447669 PRMT9Q6P2P2 845 aa23.5■■□□□ 1.35
RFFL-206ENST00000447669 MSANTD1Q6ZTZ1 278 aa23.5■■□□□ 1.35
RFFL-206ENST00000447669 ARHGAP22Q7Z5H3 698 aa23.5■■□□□ 1.35
RFFL-206ENST00000447669 VPS37AQ8NEZ2 397 aa23.5■■□□□ 1.35
RFFL-206ENST00000447669 OR4D9Q8NGE8 314 aa23.5■■□□□ 1.35
RFFL-206ENST00000447669 OR5AK3PQ8NH89 298 aa23.5■■□□□ 1.35
RFFL-206ENST00000447669 TRIM4Q9C037 500 aa23.5■■□□□ 1.35
RFFL-206ENST00000447669 CHRNA10Q9GZZ6 450 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms