RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 BECN1Q14457 450 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 ABRAXAS2Q15018 415 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 SF3B4Q15427 424 aaKnown RBP eCLIP2.96□□□□□ -1.94
PMS1-215ENST00000447232 SF1Q15637 639 aaKnown RBP2.96□□□□□ -1.94
PMS1-215ENST00000447232 NRF1Q16656 503 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 HKDC1Q2TB90 917 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 ERMARDQ5T6L9 678 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 TAF3Q5VWG9 929 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 E4F1Q66K89 784 aaPredicted RBP2.96□□□□□ -1.94
PMS1-215ENST00000447232 LRRC8BQ6P9F7 803 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 CLEC2AQ6UVW9 174 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 TMCO3Q6UWJ1 677 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 ZNF550Q7Z398 422 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 NOP9Q86U38 636 aaKnown RBP2.96□□□□□ -1.94
PMS1-215ENST00000447232 LRRC49Q8IUZ0 686 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 LMNTD1Q8N9Z9 388 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 APCDD1LQ8NCL9 501 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 FAM71BQ8TC56 605 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 C10orf105Q8TEF2 133 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 TSLPQ969D9 159 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 PPP1R14AQ96A00 147 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 C11orf24Q96F05 449 aaPredicted RBP2.96□□□□□ -1.94
PMS1-215ENST00000447232 TRIB1Q96RU8 372 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 AARSD1Q9BTE6 412 aaKnown RBP2.96□□□□□ -1.94
PMS1-215ENST00000447232 SLC6A15Q9H2J7 730 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 EXO5Q9H790 373 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 MANSC1Q9H8J5 431 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 SIX2Q9NPC8 291 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 RBM22Q9NW64 420 aaKnown RBP eCLIP2.96□□□□□ -1.941e-7■■■■■ 30.3
PMS1-215ENST00000447232 TUBA8Q9NY65 449 aaPredicted RBP2.96□□□□□ -1.94
PMS1-215ENST00000447232 CAMSAP3Q9P1Y5 1249 aaPredicted RBP2.96□□□□□ -1.94
PMS1-215ENST00000447232 PACSIN3Q9UKS6 424 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 ASF1AQ9Y294 204 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 PTGDR2Q9Y5Y4 395 aa2.96□□□□□ -1.94
PMS1-215ENST00000447232 TNFSF12-TNFSF13A0A0A6YY99 330 aa2.95□□□□□ -1.94
PMS1-215ENST00000447232 OR2A25A4D2G3 310 aa2.95□□□□□ -1.94
PMS1-215ENST00000447232 TNFSF13O75888 250 aa2.95□□□□□ -1.94
PMS1-215ENST00000447232 SCG5P05408 212 aa2.95□□□□□ -1.94
PMS1-215ENST00000447232 MMEP08473 750 aa2.95□□□□□ -1.94
PMS1-215ENST00000447232 RFPL3SP0C7P2 107 aa2.95□□□□□ -1.94
PMS1-215ENST00000447232 ERVK-10P10266 1014 aa2.95□□□□□ -1.94
PMS1-215ENST00000447232 NAT2P11245 290 aa2.95□□□□□ -1.94
PMS1-215ENST00000447232 ATF4P18848 351 aaPredicted RBP2.95□□□□□ -1.94
PMS1-215ENST00000447232 TNFRSF1AP19438 455 aa2.95□□□□□ -1.94
PMS1-215ENST00000447232 CD9P21926 228 aa2.95□□□□□ -1.94
PMS1-215ENST00000447232 SRP14P37108 136 aaKnown RBP2.95□□□□□ -1.94
PMS1-215ENST00000447232 XCR1P46094 333 aa2.95□□□□□ -1.94
PMS1-215ENST00000447232 SLCO1A2P46721 670 aa2.95□□□□□ -1.94
PMS1-215ENST00000447232 SLC6A12P48065 614 aa2.95□□□□□ -1.94
PMS1-215ENST00000447232 DNASE1L1P49184 302 aa2.95□□□□□ -1.94
PMS1-215ENST00000447232 SSR4P51571 173 aa2.95□□□□□ -1.94
PMS1-215ENST00000447232 CCR8P51685 355 aa2.95□□□□□ -1.94
PMS1-215ENST00000447232 DIO3P55073 304 aa2.95□□□□□ -1.94
PMS1-215ENST00000447232 OR4D2P58180 307 aa2.95□□□□□ -1.94
PMS1-215ENST00000447232 RPL7AP62424 266 aaKnown RBP2.95□□□□□ -1.94
PMS1-215ENST00000447232 RPL11P62913 178 aaKnown RBP2.95□□□□□ -1.94
PMS1-215ENST00000447232 OGDHQ02218 1023 aa2.95□□□□□ -1.94
PMS1-215ENST00000447232 GRB7Q14451 532 aa2.95□□□□□ -1.94
PMS1-215ENST00000447232 NSDHLQ15738 373 aa2.95□□□□□ -1.94
PMS1-215ENST00000447232 PGGHGQ32M88 737 aa2.95□□□□□ -1.94
PMS1-215ENST00000447232 CCDC40Q4G0X9 1142 aa2.95□□□□□ -1.94
PMS1-215ENST00000447232 PPP6R3Q5H9R7 873 aaPredicted RBP2.95□□□□□ -1.94
PMS1-215ENST00000447232 MFSD4BQ5TF39 518 aa2.95□□□□□ -1.94
PMS1-215ENST00000447232 ZNF474Q6S9Z5 364 aaPredicted RBP2.95□□□□□ -1.94
PMS1-215ENST00000447232 ADGRE4PQ86SQ3 457 aa2.95□□□□□ -1.94
PMS1-215ENST00000447232 NT5DC3Q86UY8 548 aa2.95□□□□□ -1.94
PMS1-215ENST00000447232 PSTKQ8IV42 348 aaKnown RBP2.95□□□□□ -1.94
PMS1-215ENST00000447232 PM20D2Q8IYS1 436 aa2.95□□□□□ -1.94
PMS1-215ENST00000447232 LRRC25Q8N386 305 aaPredicted RBP2.95□□□□□ -1.94
PMS1-215ENST00000447232 RASGEF1CQ8N431 466 aa2.95□□□□□ -1.94
PMS1-215ENST00000447232 CSNK1A1LQ8N752 337 aa2.95□□□□□ -1.94
PMS1-215ENST00000447232 OR51Q1Q8NH59 317 aa2.95□□□□□ -1.94
PMS1-215ENST00000447232 SMAP2Q8WU79 429 aaPredicted RBP2.95□□□□□ -1.94
PMS1-215ENST00000447232 TADA1Q96BN2 335 aa2.95□□□□□ -1.94
PMS1-215ENST00000447232 ZC3HAV1LQ96H79 300 aaKnown RBP2.95□□□□□ -1.94
PMS1-215ENST00000447232 SRPK1Q96SB4 655 aaKnown RBP2.95□□□□□ -1.94
PMS1-215ENST00000447232 CRACR2AQ9BSW2 395 aa2.95□□□□□ -1.94
PMS1-215ENST00000447232 TRAF4Q9BUZ4 470 aaPredicted RBP2.95□□□□□ -1.94
PMS1-215ENST00000447232 DEFB126Q9BYW3 111 aa2.95□□□□□ -1.94
PMS1-215ENST00000447232 LANCL2Q9NS86 450 aa2.95□□□□□ -1.94
PMS1-215ENST00000447232 QPCTLQ9NXS2 382 aa2.95□□□□□ -1.94
PMS1-215ENST00000447232 FBXL7Q9UJT9 491 aa2.95□□□□□ -1.94
PMS1-215ENST00000447232 ZNF223Q9UK11 482 aaPredicted RBP2.95□□□□□ -1.94
PMS1-215ENST00000447232 DNAJC12Q9UKB3 198 aa2.95□□□□□ -1.94
PMS1-215ENST00000447232 TDRKHQ9Y2W6 561 aaKnown RBP2.95□□□□□ -1.94
PMS1-215ENST00000447232 ATG4BQ9Y4P1 393 aa2.95□□□□□ -1.94
PMS1-215ENST00000447232 A0A0U1RQJ8 604 aa2.95□□□□□ -1.94
PMS1-215ENST00000447232 SAGE2PA6NJ88 616 aa2.95□□□□□ -1.94
PMS1-215ENST00000447232 A8MVJ9 347 aa2.95□□□□□ -1.94
PMS1-215ENST00000447232 VWC2LB2RUY7 222 aa2.95□□□□□ -1.94
PMS1-215ENST00000447232 DLX3O60479 287 aa2.95□□□□□ -1.94
PMS1-215ENST00000447232 OR6B1O95007 311 aa2.95□□□□□ -1.94
PMS1-215ENST00000447232 NSA2O95478 260 aaKnown RBP2.95□□□□□ -1.94
PMS1-215ENST00000447232 TGFAP01135 160 aa2.95□□□□□ -1.94
PMS1-215ENST00000447232 HKR1P10072 659 aa2.95□□□□□ -1.94
PMS1-215ENST00000447232 DPP4P27487 766 aa2.95□□□□□ -1.94
PMS1-215ENST00000447232 PTPN6P29350 595 aa2.95□□□□□ -1.94
PMS1-215ENST00000447232 FMO4P31512 558 aa2.95□□□□□ -1.94
PMS1-215ENST00000447232 NUDT6P53370 316 aa2.95□□□□□ -1.94
PMS1-215ENST00000447232 EEF1A1P68104 462 aaKnown RBP2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms