RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 ZNF704Q6ZNC4 412 aaPredicted RBP12.52□□□□□ -0.41
DDX56-206ENST00000446987 GDPGP1Q6ZNW5 385 aa12.52□□□□□ -0.41
DDX56-206ENST00000446987 C16orf62Q7Z3J2 963 aa12.52□□□□□ -0.41
DDX56-206ENST00000446987 CDH26Q8IXH8 852 aa12.52□□□□□ -0.41
DDX56-206ENST00000446987 LILRB2Q8N423 598 aa12.52□□□□□ -0.41
DDX56-206ENST00000446987 FAM160A2Q8N612 972 aaPredicted RBP12.52□□□□□ -0.41
DDX56-206ENST00000446987 CHST14Q8NCH0 376 aa12.52□□□□□ -0.41
DDX56-206ENST00000446987 C9orf43Q8TAL5 461 aaPredicted RBP12.52□□□□□ -0.41
DDX56-206ENST00000446987 ENKURQ8TC29 256 aa12.52□□□□□ -0.41
DDX56-206ENST00000446987 HEXDCQ8WVB3 486 aa12.52□□□□□ -0.41
DDX56-206ENST00000446987 RLN3Q8WXF3 142 aa12.52□□□□□ -0.41
DDX56-206ENST00000446987 RBPMSQ93062 196 aaKnown RBP12.52□□□□□ -0.41
DDX56-206ENST00000446987 SLC47A1Q96FL8 570 aa12.52□□□□□ -0.41
DDX56-206ENST00000446987 C3orf30Q96M34 536 aa12.52□□□□□ -0.41
DDX56-206ENST00000446987 WACQ9BTA9 647 aa12.52□□□□□ -0.41
DDX56-206ENST00000446987 ZNF416Q9BWM5 594 aa12.52□□□□□ -0.41
DDX56-206ENST00000446987 MMP28Q9H239 520 aa12.52□□□□□ -0.41
DDX56-206ENST00000446987 RANBP3Q9H6Z4 567 aaPredicted RBP12.52□□□□□ -0.41
DDX56-206ENST00000446987 SERGEFQ9UGK8 458 aa12.52□□□□□ -0.41
DDX56-206ENST00000446987 MBD1Q9UIS9 605 aaPredicted RBP12.52□□□□□ -0.41
DDX56-206ENST00000446987 RAB23Q9ULC3 237 aa12.52□□□□□ -0.41
DDX56-206ENST00000446987 STUB1Q9UNE7 303 aa12.52□□□□□ -0.41
DDX56-206ENST00000446987 MAN2B2Q9Y2E5 1009 aa12.52□□□□□ -0.41
DDX56-206ENST00000446987 GMPPBQ9Y5P6 360 aa12.52□□□□□ -0.41
DDX56-206ENST00000446987 THADAQ6YHU6 1953 aa12.52□□□□□ -0.41
DDX56-206ENST00000446987 FAM95CA0A1B0GW59 222 aa12.51□□□□□ -0.41
DDX56-206ENST00000446987 MROH6A6NGR9 719 aa12.51□□□□□ -0.41
DDX56-206ENST00000446987 DFFAO00273 331 aa12.51□□□□□ -0.41
DDX56-206ENST00000446987 ABCD4O14678 606 aa12.51□□□□□ -0.41
DDX56-206ENST00000446987 SLC43A1O75387 559 aa12.51□□□□□ -0.41
DDX56-206ENST00000446987 HLA-DQB1P01920 261 aa12.51□□□□□ -0.41
DDX56-206ENST00000446987 RETP07949 1114 aa12.51□□□□□ -0.41
DDX56-206ENST00000446987 RECQLP46063 649 aaPredicted RBP12.51□□□□□ -0.41
DDX56-206ENST00000446987 RGRP47804 291 aa12.51□□□□□ -0.41
DDX56-206ENST00000446987 ZFP36L2P47974 494 aaKnown RBP12.51□□□□□ -0.41
DDX56-206ENST00000446987 YBX1P67809 324 aaKnown RBP12.51□□□□□ -0.41
DDX56-206ENST00000446987 SLC14A2Q15849 920 aa12.51□□□□□ -0.41
DDX56-206ENST00000446987 ZNF79Q15937 498 aa12.51□□□□□ -0.41
DDX56-206ENST00000446987 BAK1Q16611 211 aa12.51□□□□□ -0.41
DDX56-206ENST00000446987 SYT16Q17RD7 645 aa12.51□□□□□ -0.41
DDX56-206ENST00000446987 FAM214AQ32MH5 1076 aa12.51□□□□□ -0.41
DDX56-206ENST00000446987 GLYR1Q49A26 553 aaPredicted RBP12.51□□□□□ -0.41
DDX56-206ENST00000446987 KANK2Q63ZY3 851 aa12.51□□□□□ -0.41
DDX56-206ENST00000446987 KCTD11Q693B1 232 aa12.51□□□□□ -0.41
DDX56-206ENST00000446987 LAIR1Q6GTX8 287 aa12.51□□□□□ -0.41
DDX56-206ENST00000446987 PLET1Q6UQ28 207 aa12.51□□□□□ -0.41
DDX56-206ENST00000446987 SLC41A1Q8IVJ1 513 aa12.51□□□□□ -0.41
DDX56-206ENST00000446987 CDYL2Q8N8U2 506 aa12.51□□□□□ -0.41
DDX56-206ENST00000446987 OR52K1Q8NGK4 314 aa12.51□□□□□ -0.41
DDX56-206ENST00000446987 UBASH3BQ8TF42 649 aa12.51□□□□□ -0.41
DDX56-206ENST00000446987 LRRN4Q8WUT4 740 aa12.51□□□□□ -0.41
DDX56-206ENST00000446987 RADILQ96JH8 1075 aa12.51□□□□□ -0.41
DDX56-206ENST00000446987 SORCS2Q96PQ0 1159 aa12.51□□□□□ -0.41
DDX56-206ENST00000446987 OMDQ99983 421 aa12.51□□□□□ -0.41
DDX56-206ENST00000446987 ACTR8Q9H981 624 aa12.51□□□□□ -0.41
DDX56-206ENST00000446987 PCDHB16Q9NRJ7 776 aa12.51□□□□□ -0.41
DDX56-206ENST00000446987 AIG1Q9NVV5 245 aa12.51□□□□□ -0.41
DDX56-206ENST00000446987 INVSQ9Y283 1065 aa12.51□□□□□ -0.41
DDX56-206ENST00000446987 HRH3Q9Y5N1 445 aa12.51□□□□□ -0.41
DDX56-206ENST00000446987 IGHV1OR15-9A0A0B4J2B8 117 aa12.51□□□□□ -0.41
DDX56-206ENST00000446987 IQCMA0A1B0GVH7 501 aa12.51□□□□□ -0.41
DDX56-206ENST00000446987 C10orf142B7Z368 130 aa12.51□□□□□ -0.41
DDX56-206ENST00000446987 SNAPINO95295 136 aa12.51□□□□□ -0.41
DDX56-206ENST00000446987 LDOC1O95751 146 aaPredicted RBP12.51□□□□□ -0.41
DDX56-206ENST00000446987 IGLV3-19P01714 112 aa12.51□□□□□ -0.41
DDX56-206ENST00000446987 DRD3P35462 400 aa12.51□□□□□ -0.41
DDX56-206ENST00000446987 RGS6P49758 472 aa12.51□□□□□ -0.41
DDX56-206ENST00000446987 RUNX1T1Q06455 604 aa12.51□□□□□ -0.41
DDX56-206ENST00000446987 ELAVL3Q14576 367 aaKnown RBP12.51□□□□□ -0.41
DDX56-206ENST00000446987 TATDN3Q17R31 274 aa12.51□□□□□ -0.41
DDX56-206ENST00000446987 LRRC66Q68CR7 880 aa12.51□□□□□ -0.41
DDX56-206ENST00000446987 OVCH2Q7RTZ1 564 aa12.51□□□□□ -0.41
DDX56-206ENST00000446987 OR8H3Q8N146 312 aa12.51□□□□□ -0.41
DDX56-206ENST00000446987 FAM131CQ96AQ9 280 aa12.51□□□□□ -0.41
DDX56-206ENST00000446987 COL21A1Q96P44 957 aa12.51□□□□□ -0.41
DDX56-206ENST00000446987 TM6SF2Q9BZW4 377 aa12.51□□□□□ -0.41
DDX56-206ENST00000446987 PIGUQ9H490 435 aa12.51□□□□□ -0.41
DDX56-206ENST00000446987 FBRSQ9HAH7 460 aa12.51□□□□□ -0.41
DDX56-206ENST00000446987 LYARQ9NX58 379 aaKnown RBP12.51□□□□□ -0.41
DDX56-206ENST00000446987 KIF25Q9UIL4 384 aa12.51□□□□□ -0.41
DDX56-206ENST00000446987 ING4Q9UNL4 249 aa12.51□□□□□ -0.41
DDX56-206ENST00000446987 PKP3Q9Y446 797 aa12.51□□□□□ -0.41
DDX56-206ENST00000446987 DNAJC15Q9Y5T4 150 aa12.51□□□□□ -0.41
DDX56-206ENST00000446987 LAMA1P25391 3075 aa12.5□□□□□ -0.41
DDX56-206ENST00000446987 WDR87Q6ZQQ6 2873 aa12.5□□□□□ -0.41
DDX56-206ENST00000446987 OTOGLQ3ZCN5 2332 aa12.5□□□□□ -0.41
DDX56-206ENST00000446987 KRBOX1C9JBD0 128 aa12.5□□□□□ -0.41
DDX56-206ENST00000446987 UBFD1O14562 309 aaKnown RBP12.5□□□□□ -0.41
DDX56-206ENST00000446987 PSMD3O43242 534 aa12.5□□□□□ -0.41
DDX56-206ENST00000446987 HCN1O60741 890 aa12.5□□□□□ -0.41
DDX56-206ENST00000446987 GJB3O75712 270 aa12.5□□□□□ -0.41
DDX56-206ENST00000446987 CDK1P06493 297 aa12.5□□□□□ -0.41
DDX56-206ENST00000446987 LTA4HP09960 611 aaKnown RBP12.5□□□□□ -0.41
DDX56-206ENST00000446987 DGKQP52824 942 aa12.5□□□□□ -0.41
DDX56-206ENST00000446987 SNRPD2P62316 118 aaKnown RBP12.5□□□□□ -0.41
DDX56-206ENST00000446987 IL10RBQ08334 325 aa12.5□□□□□ -0.41
DDX56-206ENST00000446987 CST6Q15828 149 aa12.5□□□□□ -0.41
DDX56-206ENST00000446987 INO80DQ53TQ3 878 aaPredicted RBP12.5□□□□□ -0.41
DDX56-206ENST00000446987 PAGE3Q5JUK9 113 aa12.5□□□□□ -0.41
DDX56-206ENST00000446987 ZNF678Q5SXM1 525 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms