RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 CREB1P16220 341 aa22.48■■□□□ 1.19
C9orf3-207ENST00000445181 CPN2P22792 545 aa22.48■■□□□ 1.19
C9orf3-207ENST00000445181 HSD17B7P56937 341 aa22.48■■□□□ 1.19
C9orf3-207ENST00000445181 AP2B1P63010 937 aa22.48■■□□□ 1.19
C9orf3-207ENST00000445181 ASPHQ12797 758 aa22.48■■□□□ 1.19
C9orf3-207ENST00000445181 PCLAFQ15004 111 aa22.48■■□□□ 1.19
C9orf3-207ENST00000445181 AGAP7PQ5VUJ5 663 aa22.48■■□□□ 1.19
C9orf3-207ENST00000445181 NUDT13Q86X67 352 aa22.48■■□□□ 1.19
C9orf3-207ENST00000445181 ZNF595Q8IYB9 648 aa22.48■■□□□ 1.19
C9orf3-207ENST00000445181 EFCAB3Q8N7B9 438 aa22.48■■□□□ 1.19
C9orf3-207ENST00000445181 AGAP4Q96P64 663 aa22.48■■□□□ 1.19
C9orf3-207ENST00000445181 LPAR4Q99677 370 aa22.48■■□□□ 1.19
C9orf3-207ENST00000445181 SMAD5Q99717 465 aaKnown RBP22.48■■□□□ 1.19
C9orf3-207ENST00000445181 ZNF552Q9H707 407 aaPredicted RBP22.48■■□□□ 1.19
C9orf3-207ENST00000445181 NECTIN3Q9NQS3 549 aa22.48■■□□□ 1.19
C9orf3-207ENST00000445181 AHSPQ9NZD4 102 aa22.48■■□□□ 1.19
C9orf3-207ENST00000445181 KCMF1Q9P0J7 381 aa22.48■■□□□ 1.19
C9orf3-207ENST00000445181 SETXQ7Z333 2677 aaKnown RBP22.48■■□□□ 1.19
C9orf3-207ENST00000445181 MANBAO00462 879 aa22.47■■□□□ 1.19
C9orf3-207ENST00000445181 CYR61O00622 381 aa22.47■■□□□ 1.19
C9orf3-207ENST00000445181 ULK1O75385 1050 aa22.47■■□□□ 1.19
C9orf3-207ENST00000445181 SEMA3DO95025 777 aa22.47■■□□□ 1.19
C9orf3-207ENST00000445181 HNRNPFP52597 415 aaKnown RBP22.47■■□□□ 1.19
C9orf3-207ENST00000445181 BTBD16Q32M84 506 aa22.47■■□□□ 1.19
C9orf3-207ENST00000445181 TCHHL1Q5QJ38 904 aaPredicted RBP22.47■■□□□ 1.19
C9orf3-207ENST00000445181 BEND6Q5SZJ8 279 aaPredicted RBP22.47■■□□□ 1.19
C9orf3-207ENST00000445181 FAM219BQ5XKK7 198 aa22.47■■□□□ 1.19
C9orf3-207ENST00000445181 PAPD4Q6PIY7 484 aaKnown RBP22.47■■□□□ 1.19
C9orf3-207ENST00000445181 CLNKQ7Z7G1 428 aa22.47■■□□□ 1.19
C9orf3-207ENST00000445181 HPS6Q86YV9 775 aa22.47■■□□□ 1.19
C9orf3-207ENST00000445181 ZCCHC7Q8N3Z6 543 aaKnown RBP22.47■■□□□ 1.19
C9orf3-207ENST00000445181 TMEM52Q8NDY8 209 aa22.47■■□□□ 1.19
C9orf3-207ENST00000445181 AGAP11Q8TF27 550 aa22.47■■□□□ 1.19
C9orf3-207ENST00000445181 SREK1Q8WXA9 508 aaKnown RBP22.47■■□□□ 1.19
C9orf3-207ENST00000445181 HBEGFQ99075 208 aa22.47■■□□□ 1.19
C9orf3-207ENST00000445181 MFRPQ9BY79 579 aa22.47■■□□□ 1.19
C9orf3-207ENST00000445181 BRF2Q9HAW0 419 aa22.47■■□□□ 1.19
C9orf3-207ENST00000445181 RRAGDQ9NQL2 400 aaPredicted RBP22.47■■□□□ 1.19
C9orf3-207ENST00000445181 NMRK1Q9NWW6 199 aa22.47■■□□□ 1.19
C9orf3-207ENST00000445181 MS4A12Q9NXJ0 267 aa22.47■■□□□ 1.19
C9orf3-207ENST00000445181 PHF11Q9UIL8 331 aa22.47■■□□□ 1.19
C9orf3-207ENST00000445181 TRIM13O60858 407 aa22.46■■□□□ 1.19
C9orf3-207ENST00000445181 EEDO75530 441 aaKnown RBP22.46■■□□□ 1.19
C9orf3-207ENST00000445181 CELA2AP08217 269 aa22.46■■□□□ 1.19
C9orf3-207ENST00000445181 BSGP35613 385 aa22.46■■□□□ 1.19
C9orf3-207ENST00000445181 RIPOR1Q6ZS17 1223 aa22.46■■□□□ 1.19
C9orf3-207ENST00000445181 GPR180Q86V85 440 aa22.46■■□□□ 1.19
C9orf3-207ENST00000445181 ATCAYQ86WG3 371 aa22.46■■□□□ 1.19
C9orf3-207ENST00000445181 SCUBE1Q8IWY4 988 aa22.46■■□□□ 1.19
C9orf3-207ENST00000445181 TM9SF4Q92544 642 aa22.46■■□□□ 1.19
C9orf3-207ENST00000445181 IMMP1LQ96LU5 166 aa22.46■■□□□ 1.19
C9orf3-207ENST00000445181 KCNA7Q96RP8 456 aa22.46■■□□□ 1.19
C9orf3-207ENST00000445181 MRPL1Q9BYD6 325 aaKnown RBP22.46■■□□□ 1.19
C9orf3-207ENST00000445181 LYARQ9NX58 379 aaKnown RBP22.46■■□□□ 1.19
C9orf3-207ENST00000445181 C5AR2Q9P296 337 aa22.46■■□□□ 1.19
C9orf3-207ENST00000445181 DOCK10Q96BY6 2186 aa22.45■■□□□ 1.18
C9orf3-207ENST00000445181 IGKV3D-11A0A0A0MRZ8 115 aa22.45■■□□□ 1.18
C9orf3-207ENST00000445181 TCRBV16S1A1N1A0A5B0 115 aa22.45■■□□□ 1.18
C9orf3-207ENST00000445181 ARHGAP10A1A4S6 786 aa22.45■■□□□ 1.18
C9orf3-207ENST00000445181 UBFD1O14562 309 aaKnown RBP22.45■■□□□ 1.18
C9orf3-207ENST00000445181 CTIFO43310 598 aaKnown RBP22.45■■□□□ 1.18
C9orf3-207ENST00000445181 GBAP04062 536 aa22.45■■□□□ 1.18
C9orf3-207ENST00000445181 ALDH3A1P30838 453 aa22.45■■□□□ 1.18
C9orf3-207ENST00000445181 TLX1P31314 330 aaPredicted RBP22.45■■□□□ 1.18
C9orf3-207ENST00000445181 CD97P48960 835 aa22.45■■□□□ 1.18
C9orf3-207ENST00000445181 EXT1Q16394 746 aa22.45■■□□□ 1.18
C9orf3-207ENST00000445181 PLAG1Q6DJT9 500 aa22.45■■□□□ 1.18
C9orf3-207ENST00000445181 JMJD6Q6NYC1 403 aaPredicted RBP22.45■■□□□ 1.18
C9orf3-207ENST00000445181 PAGE2Q7Z2X7 111 aa22.45■■□□□ 1.18
C9orf3-207ENST00000445181 RBMXL3Q8N7X1 1067 aaKnown RBP22.45■■□□□ 1.18
C9orf3-207ENST00000445181 BRIX1Q8TDN6 353 aaKnown RBP22.45■■□□□ 1.18
C9orf3-207ENST00000445181 WDR77Q9BQA1 342 aaPredicted RBP22.45■■□□□ 1.18
C9orf3-207ENST00000445181 ZNF717Q9BY31 904 aaPredicted RBP22.45■■□□□ 1.18
C9orf3-207ENST00000445181 SHCBP1LQ9BZQ2 653 aa22.45■■□□□ 1.18
C9orf3-207ENST00000445181 DDX31Q9H8H2 851 aaKnown RBP22.45■■□□□ 1.18
C9orf3-207ENST00000445181 PNO1Q9NRX1 252 aaKnown RBP22.45■■□□□ 1.18
C9orf3-207ENST00000445181 PTGFRNQ9P2B2 879 aa22.45■■□□□ 1.18
C9orf3-207ENST00000445181 TIMM22Q9Y584 194 aa22.45■■□□□ 1.18
C9orf3-207ENST00000445181 A0A0A6YYD5 115 aa22.44■■□□□ 1.18
C9orf3-207ENST00000445181 BLACEA4D250 179 aa22.44■■□□□ 1.18
C9orf3-207ENST00000445181 A8MUA0 341 aa22.44■■□□□ 1.18
C9orf3-207ENST00000445181 H3BQF6 201 aa22.44■■□□□ 1.18
C9orf3-207ENST00000445181 TYROBPO43914 113 aa22.44■■□□□ 1.18
C9orf3-207ENST00000445181 CTNSO60931 367 aa22.44■■□□□ 1.18
C9orf3-207ENST00000445181 FAM58BPP0C7Q3 252 aa22.44■■□□□ 1.18
C9orf3-207ENST00000445181 ITGAMP11215 1152 aa22.44■■□□□ 1.18
C9orf3-207ENST00000445181 BUD31P41223 144 aaPredicted RBP22.44■■□□□ 1.18
C9orf3-207ENST00000445181 STX4Q12846 297 aa22.44■■□□□ 1.18
C9orf3-207ENST00000445181 EXOC3L1Q86VI1 746 aa22.44■■□□□ 1.18
C9orf3-207ENST00000445181 SIRT6Q8N6T7 355 aa22.44■■□□□ 1.18
C9orf3-207ENST00000445181 CPT1CQ8TCG5 803 aa22.44■■□□□ 1.18
C9orf3-207ENST00000445181 PGM2Q96G03 612 aa22.44■■□□□ 1.18
C9orf3-207ENST00000445181 MECRQ9BV79 373 aa22.44■■□□□ 1.18
C9orf3-207ENST00000445181 GATA5Q9BWX5 397 aaPredicted RBP22.44■■□□□ 1.18
C9orf3-207ENST00000445181 STMN4Q9H169 189 aaPredicted RBP22.44■■□□□ 1.18
C9orf3-207ENST00000445181 VPS29Q9UBQ0 182 aa22.44■■□□□ 1.18
C9orf3-207ENST00000445181 GOLGA6L10A6NI86 522 aa22.43■■□□□ 1.18
C9orf3-207ENST00000445181 TMPRSS11DO60235 418 aa22.43■■□□□ 1.18
C9orf3-207ENST00000445181 SORBS2O94875 1100 aaKnown RBP22.43■■□□□ 1.18
C9orf3-207ENST00000445181 KLK1P06870 262 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms