RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 TUSC5Q8IXB3 177 aa3.8□□□□□ -1.8
HMGB3P6-201ENST00000444896 TTC5Q8N0Z6 440 aa3.8□□□□□ -1.8
HMGB3P6-201ENST00000444896 PRSS33Q8NF86 280 aa3.8□□□□□ -1.8
HMGB3P6-201ENST00000444896 NUP37Q8NFH4 326 aa3.8□□□□□ -1.8
HMGB3P6-201ENST00000444896 AFAP1L1Q8TED9 768 aa3.8□□□□□ -1.8
HMGB3P6-201ENST00000444896 GTF3AQ92664 365 aaKnown RBP3.8□□□□□ -1.8
HMGB3P6-201ENST00000444896 CASP10Q92851 521 aa3.8□□□□□ -1.8
HMGB3P6-201ENST00000444896 SNRNP40Q96DI7 357 aaKnown RBP3.8□□□□□ -1.8
HMGB3P6-201ENST00000444896 OMA1Q96E52 524 aa3.8□□□□□ -1.8
HMGB3P6-201ENST00000444896 CNRIP1Q96F85 164 aaPredicted RBP3.8□□□□□ -1.8
HMGB3P6-201ENST00000444896 WBP1Q96G27 269 aa3.8□□□□□ -1.8
HMGB3P6-201ENST00000444896 GPATCH1Q9BRR8 931 aaKnown RBP3.8□□□□□ -1.8
HMGB3P6-201ENST00000444896 UTP14AQ9BVJ6 771 aaKnown RBP3.8□□□□□ -1.8
HMGB3P6-201ENST00000444896 ZNF350Q9GZX5 532 aa3.8□□□□□ -1.8
HMGB3P6-201ENST00000444896 SRD5A3Q9H8P0 318 aa3.8□□□□□ -1.8
HMGB3P6-201ENST00000444896 GMEB2Q9UKD1 530 aa3.8□□□□□ -1.8
HMGB3P6-201ENST00000444896 COLEC10Q9Y6Z7 277 aa3.8□□□□□ -1.8
HMGB3P6-201ENST00000444896 SIPA1L3O60292 1781 aaPredicted RBP3.8□□□□□ -1.8
HMGB3P6-201ENST00000444896 MRC1P22897 1456 aa3.79□□□□□ -1.8
HMGB3P6-201ENST00000444896 SCN11AQ9UI33 1791 aa3.79□□□□□ -1.8
HMGB3P6-201ENST00000444896 ADCY9O60503 1353 aa3.79□□□□□ -1.8
HMGB3P6-201ENST00000444896 TMEM94Q12767 1356 aa3.79□□□□□ -1.8
HMGB3P6-201ENST00000444896 PARP4Q9UKK3 1724 aaKnown RBP3.79□□□□□ -1.8
HMGB3P6-201ENST00000444896 PFASO15067 1338 aa3.79□□□□□ -1.8
HMGB3P6-201ENST00000444896 NDUFAF8A1L188 74 aa3.79□□□□□ -1.8
HMGB3P6-201ENST00000444896 SDR42E2A6NKP2 422 aa3.79□□□□□ -1.8
HMGB3P6-201ENST00000444896 CYSRT1A8MQ03 144 aa3.79□□□□□ -1.8
HMGB3P6-201ENST00000444896 G3V2L1 256 aa3.79□□□□□ -1.8
HMGB3P6-201ENST00000444896 H0YIG0 161 aa3.79□□□□□ -1.8
HMGB3P6-201ENST00000444896 HIP1O00291 1037 aa3.79□□□□□ -1.8
HMGB3P6-201ENST00000444896 SLC1A7O00341 560 aa3.79□□□□□ -1.8
HMGB3P6-201ENST00000444896 PSMA7O14818 248 aa3.79□□□□□ -1.8
HMGB3P6-201ENST00000444896 PGRMC2O15173 223 aa3.79□□□□□ -1.8
HMGB3P6-201ENST00000444896 STX6O43752 255 aa3.79□□□□□ -1.8
HMGB3P6-201ENST00000444896 SLC16A8O95907 504 aa3.79□□□□□ -1.8
HMGB3P6-201ENST00000444896 KRT3P12035 628 aa3.79□□□□□ -1.8
HMGB3P6-201ENST00000444896 SELEP16581 610 aa3.79□□□□□ -1.8
HMGB3P6-201ENST00000444896 ITIH1P19827 911 aa3.79□□□□□ -1.8
HMGB3P6-201ENST00000444896 CHMLP26374 656 aa3.79□□□□□ -1.8
HMGB3P6-201ENST00000444896 SRD5A2P31213 254 aa3.79□□□□□ -1.8
HMGB3P6-201ENST00000444896 FRKP42685 505 aaPredicted RBP3.79□□□□□ -1.8
HMGB3P6-201ENST00000444896 IER3P46695 156 aa3.79□□□□□ -1.8
HMGB3P6-201ENST00000444896 OR3A3P47888 321 aa3.79□□□□□ -1.8
HMGB3P6-201ENST00000444896 ABRQ12979 859 aa3.79□□□□□ -1.8
HMGB3P6-201ENST00000444896 NFATC2Q13469 925 aa3.79□□□□□ -1.8
HMGB3P6-201ENST00000444896 FGD3Q5JSP0 725 aa3.79□□□□□ -1.8
HMGB3P6-201ENST00000444896 BEND3Q5T5X7 828 aa3.79□□□□□ -1.8
HMGB3P6-201ENST00000444896 ATP1A1-AS1Q5TC04 95 aa3.79□□□□□ -1.8
HMGB3P6-201ENST00000444896 PM20D1Q6GTS8 502 aa3.79□□□□□ -1.8
HMGB3P6-201ENST00000444896 KIF6Q6ZMV9 814 aa3.79□□□□□ -1.8
HMGB3P6-201ENST00000444896 STXBP4Q6ZWJ1 553 aa3.79□□□□□ -1.8
HMGB3P6-201ENST00000444896 CHMP1BQ7LBR1 199 aa3.79□□□□□ -1.8
HMGB3P6-201ENST00000444896 TRMT11Q7Z4G4 463 aaKnown RBP3.79□□□□□ -1.8
HMGB3P6-201ENST00000444896 KIAA0895Q8NCT3 520 aa3.79□□□□□ -1.8
HMGB3P6-201ENST00000444896 MAPK1IP1LQ8NDC0 245 aa3.79□□□□□ -1.8
HMGB3P6-201ENST00000444896 OR7G3Q8NG95 312 aa3.79□□□□□ -1.8
HMGB3P6-201ENST00000444896 OR4D10Q8NGI6 311 aa3.79□□□□□ -1.8
HMGB3P6-201ENST00000444896 CKAP2Q8WWK9 683 aa3.79□□□□□ -1.8
HMGB3P6-201ENST00000444896 ANP32BQ92688 251 aaKnown RBP3.79□□□□□ -1.8
HMGB3P6-201ENST00000444896 C18orf12Q96KH6 178 aa3.79□□□□□ -1.8
HMGB3P6-201ENST00000444896 LURAP1Q96LR2 239 aa3.79□□□□□ -1.8
HMGB3P6-201ENST00000444896 RASL10BQ96S79 203 aa3.79□□□□□ -1.8
HMGB3P6-201ENST00000444896 HNRNPABQ99729 332 aaKnown RBP3.79□□□□□ -1.8
HMGB3P6-201ENST00000444896 MCRIP2Q9BUT9 160 aaKnown RBP3.79□□□□□ -1.8
HMGB3P6-201ENST00000444896 MTHFD2LQ9H903 347 aaPredicted RBP3.79□□□□□ -1.8
HMGB3P6-201ENST00000444896 RPF1Q9H9Y2 349 aaKnown RBP3.79□□□□□ -1.8
HMGB3P6-201ENST00000444896 IL1RAPL2Q9NP60 686 aa3.79□□□□□ -1.8
HMGB3P6-201ENST00000444896 EXOC1Q9NV70 894 aa3.79□□□□□ -1.8
HMGB3P6-201ENST00000444896 THEGQ9P2T0 379 aa3.79□□□□□ -1.8
HMGB3P6-201ENST00000444896 SATB2Q9UPW6 733 aa3.79□□□□□ -1.8
HMGB3P6-201ENST00000444896 LIPT1Q9Y234 373 aa3.79□□□□□ -1.8
HMGB3P6-201ENST00000444896 RNF215Q9Y6U7 377 aa3.79□□□□□ -1.8
HMGB3P6-201ENST00000444896 LAMB4A4D0S4 1761 aa3.79□□□□□ -1.8
HMGB3P6-201ENST00000444896 PKD1L3Q7Z443 1732 aa3.78□□□□□ -1.8
HMGB3P6-201ENST00000444896 CRYBG1Q9Y4K1 1723 aa3.78□□□□□ -1.8
HMGB3P6-201ENST00000444896 TDRD15B5MCY1 1934 aaKnown RBP3.78□□□□□ -1.8
HMGB3P6-201ENST00000444896 RAD50Q92878 1312 aa3.78□□□□□ -1.8
HMGB3P6-201ENST00000444896 USP42Q9H9J4 1324 aaKnown RBP3.78□□□□□ -1.8
HMGB3P6-201ENST00000444896 A0A0U1RQK1 487 aa3.78□□□□□ -1.8
HMGB3P6-201ENST00000444896 ZNF320A2RRD8 509 aa3.78□□□□□ -1.8
HMGB3P6-201ENST00000444896 ZNF732B4DXR9 585 aa3.78□□□□□ -1.8
HMGB3P6-201ENST00000444896 SOCS3O14543 225 aa3.78□□□□□ -1.8
HMGB3P6-201ENST00000444896 SURF4O15260 269 aa3.78□□□□□ -1.8
HMGB3P6-201ENST00000444896 DCXO43602 365 aa3.78□□□□□ -1.8
HMGB3P6-201ENST00000444896 LRCH4O75427 683 aa3.78□□□□□ -1.8
HMGB3P6-201ENST00000444896 GH1P01241 217 aa3.78□□□□□ -1.8
HMGB3P6-201ENST00000444896 UGT1A4P22310 534 aa3.78□□□□□ -1.8
HMGB3P6-201ENST00000444896 CETN1Q12798 172 aa3.78□□□□□ -1.8
HMGB3P6-201ENST00000444896 FAM189A2Q15884 450 aa3.78□□□□□ -1.8
HMGB3P6-201ENST00000444896 KLHL40Q2TBA0 621 aa3.78□□□□□ -1.8
HMGB3P6-201ENST00000444896 MOGAT2Q3SYC2 334 aa3.78□□□□□ -1.8
HMGB3P6-201ENST00000444896 CCDC158Q5M9N0 1113 aa3.78□□□□□ -1.8
HMGB3P6-201ENST00000444896 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.78□□□□□ -1.8
HMGB3P6-201ENST00000444896 LCE1FQ5T754 118 aa3.78□□□□□ -1.8
HMGB3P6-201ENST00000444896 LRRTM1Q86UE6 522 aa3.78□□□□□ -1.8
HMGB3P6-201ENST00000444896 AQP12AQ8IXF9 295 aa3.78□□□□□ -1.8
HMGB3P6-201ENST00000444896 SLC22A15Q8IZD6 547 aa3.78□□□□□ -1.8
HMGB3P6-201ENST00000444896 TEX26Q8N6G2 289 aa3.78□□□□□ -1.8
HMGB3P6-201ENST00000444896 ZNF485Q8NCK3 441 aa3.78□□□□□ -1.8
HMGB3P6-201ENST00000444896 PRICKLE1Q96MT3 831 aaPredicted RBP3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms