RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 TGFBR3LH3BV60 316 aa18.74■□□□□ 0.59
LRCH3-208ENST00000443727 KLK8O60259 260 aa18.74■□□□□ 0.59
LRCH3-208ENST00000443727 NEURL1O76050 574 aa18.74■□□□□ 0.59
LRCH3-208ENST00000443727 SP1P08047 785 aa18.74■□□□□ 0.59
LRCH3-208ENST00000443727 STSP08842 583 aa18.74■□□□□ 0.59
LRCH3-208ENST00000443727 TNNI3P19429 210 aa18.74■□□□□ 0.59
LRCH3-208ENST00000443727 ECHS1P30084 290 aa18.74■□□□□ 0.59
LRCH3-208ENST00000443727 PIK3CBP42338 1070 aa18.74■□□□□ 0.59
LRCH3-208ENST00000443727 ALDH6A1Q02252 535 aaKnown RBP18.74■□□□□ 0.59
LRCH3-208ENST00000443727 RBPJQ06330 500 aa18.74■□□□□ 0.59
LRCH3-208ENST00000443727 ELAVL1Q15717 326 aaKnown RBP18.74■□□□□ 0.59
LRCH3-208ENST00000443727 DEPDC1Q5TB30 811 aa18.74■□□□□ 0.59
LRCH3-208ENST00000443727 ZNF468Q5VIY5 522 aaPredicted RBP18.74■□□□□ 0.59
LRCH3-208ENST00000443727 C1QL3Q5VWW1 255 aa18.74■□□□□ 0.59
LRCH3-208ENST00000443727 HIST2H2BCQ6DN03 193 aa18.74■□□□□ 0.59
LRCH3-208ENST00000443727 OR4C11Q6IEV9 310 aa18.74■□□□□ 0.59
LRCH3-208ENST00000443727 MAMDC2Q7Z304 686 aaPredicted RBP18.74■□□□□ 0.59
LRCH3-208ENST00000443727 GALNTL5Q7Z4T8 443 aa18.74■□□□□ 0.59
LRCH3-208ENST00000443727 GOLGA7Q7Z5G4 137 aa18.74■□□□□ 0.59
LRCH3-208ENST00000443727 FJX1Q86VR8 437 aa18.74■□□□□ 0.59
LRCH3-208ENST00000443727 PLD6Q8N2A8 252 aaKnown RBP18.74■□□□□ 0.59
LRCH3-208ENST00000443727 PTGR2Q8N8N7 351 aaPredicted RBP18.74■□□□□ 0.59
LRCH3-208ENST00000443727 APCDD1LQ8NCL9 501 aa18.74■□□□□ 0.59
LRCH3-208ENST00000443727 ATP6V1E2Q96A05 226 aa18.74■□□□□ 0.59
LRCH3-208ENST00000443727 RGMAQ96B86 450 aa18.74■□□□□ 0.59
LRCH3-208ENST00000443727 TRIM44Q96DX7 344 aaPredicted RBP18.74■□□□□ 0.59
LRCH3-208ENST00000443727 SCMH1Q96GD3 660 aa18.74■□□□□ 0.59
LRCH3-208ENST00000443727 ALOXE3Q9BYJ1 711 aa18.74■□□□□ 0.59
LRCH3-208ENST00000443727 IPPKQ9H8X2 491 aa18.74■□□□□ 0.59
LRCH3-208ENST00000443727 ZNF358Q9NW07 568 aa18.74■□□□□ 0.59
LRCH3-208ENST00000443727 KCMF1Q9P0J7 381 aa18.74■□□□□ 0.59
LRCH3-208ENST00000443727 SMIM24O75264 130 aa18.73■□□□□ 0.59
LRCH3-208ENST00000443727 SIX3O95343 332 aaPredicted RBP18.73■□□□□ 0.59
LRCH3-208ENST00000443727 CPN2P22792 545 aa18.73■□□□□ 0.59
LRCH3-208ENST00000443727 CNTFP26441 200 aa18.73■□□□□ 0.59
LRCH3-208ENST00000443727 HLCSP50747 726 aa18.73■□□□□ 0.59
LRCH3-208ENST00000443727 SLAMF1Q13291 335 aa18.73■□□□□ 0.59
LRCH3-208ENST00000443727 CPSF6Q16630 551 aaKnown RBP eCLIP18.73■□□□□ 0.59
LRCH3-208ENST00000443727 TSNAXIP1Q2TAA8 658 aa18.73■□□□□ 0.59
LRCH3-208ENST00000443727 TECRLQ5HYJ1 363 aa18.73■□□□□ 0.59
LRCH3-208ENST00000443727 METTL2BQ6P1Q9 378 aaKnown RBP18.73■□□□□ 0.59
LRCH3-208ENST00000443727 PNPLA5Q7Z6Z6 429 aaPredicted RBP18.73■□□□□ 0.59
LRCH3-208ENST00000443727 IFT20Q8IY31 132 aa18.73■□□□□ 0.59
LRCH3-208ENST00000443727 RNF175Q8N4F7 328 aa18.73■□□□□ 0.59
LRCH3-208ENST00000443727 TMEM156Q8N614 296 aa18.73■□□□□ 0.59
LRCH3-208ENST00000443727 DAZLQ92904 295 aaKnown RBP18.73■□□□□ 0.59
LRCH3-208ENST00000443727 PHF21BQ96EK2 531 aa18.73■□□□□ 0.59
LRCH3-208ENST00000443727 SORBS1Q9BX66 1292 aaKnown RBP18.73■□□□□ 0.59
LRCH3-208ENST00000443727 DMRT3Q9NQL9 472 aa18.73■□□□□ 0.59
LRCH3-208ENST00000443727 TMCO1Q9UM00 188 aa18.73■□□□□ 0.59
LRCH3-208ENST00000443727 NFU1Q9UMS0 254 aa18.73■□□□□ 0.59
LRCH3-208ENST00000443727 CLDN16Q9Y5I7 305 aa18.73■□□□□ 0.59
LRCH3-208ENST00000443727 ZGRF1Q86YA3 2104 aa18.73■□□□□ 0.59
LRCH3-208ENST00000443727 TRGV8A0A0C4DH27 118 aa18.72■□□□□ 0.59
LRCH3-208ENST00000443727 EXOC1LA0A1B0GW35 172 aa18.72■□□□□ 0.59
LRCH3-208ENST00000443727 TRIM49D1C9J1S8 452 aa18.72■□□□□ 0.59
LRCH3-208ENST00000443727 UGDHO60701 494 aa18.72■□□□□ 0.59
LRCH3-208ENST00000443727 LDB3O75112 727 aa18.72■□□□□ 0.59
LRCH3-208ENST00000443727 ZFAND5O76080 213 aa18.72■□□□□ 0.59
LRCH3-208ENST00000443727 PTX3P26022 381 aaPredicted RBP18.72■□□□□ 0.59
LRCH3-208ENST00000443727 TRHRP34981 398 aaPredicted RBP18.72■□□□□ 0.59
LRCH3-208ENST00000443727 ID2Q02363 134 aa18.72■□□□□ 0.59
LRCH3-208ENST00000443727 SERTAD2Q14140 314 aa18.72■□□□□ 0.59
LRCH3-208ENST00000443727 LGSNQ5TDP6 509 aa18.72■□□□□ 0.59
LRCH3-208ENST00000443727 OR14A16Q8NHC5 309 aa18.72■□□□□ 0.59
LRCH3-208ENST00000443727 DCAKDQ8WVC6 231 aa18.72■□□□□ 0.59
LRCH3-208ENST00000443727 ISL2Q96A47 359 aa18.72■□□□□ 0.59
LRCH3-208ENST00000443727 TSPAN10Q9H1Z9 355 aaPredicted RBP18.72■□□□□ 0.59
LRCH3-208ENST00000443727 NOL11Q9H8H0 719 aaKnown RBP18.72■□□□□ 0.59
LRCH3-208ENST00000443727 XPR1Q9UBH6 696 aa18.72■□□□□ 0.59
LRCH3-208ENST00000443727 VTI1BQ9UEU0 232 aa18.72■□□□□ 0.59
LRCH3-208ENST00000443727 ZNF180Q9UJW8 692 aa18.72■□□□□ 0.59
LRCH3-208ENST00000443727 PPIEQ9UNP9 301 aaKnown RBP18.72■□□□□ 0.59
LRCH3-208ENST00000443727 RNF11Q9Y3C5 154 aa18.72■□□□□ 0.59
LRCH3-208ENST00000443727 H0YIV9 168 aa18.71■□□□□ 0.59
LRCH3-208ENST00000443727 NME2P1O60361 137 aa18.71■□□□□ 0.59
LRCH3-208ENST00000443727 ITGA10O75578 1167 aa18.71■□□□□ 0.59
LRCH3-208ENST00000443727 SCELO95171 688 aa18.71■□□□□ 0.59
LRCH3-208ENST00000443727 CLDN9O95484 217 aa18.71■□□□□ 0.59
LRCH3-208ENST00000443727 COL6A2P12110 1019 aa18.71■□□□□ 0.59
LRCH3-208ENST00000443727 NME2P22392 152 aa18.71■□□□□ 0.59
LRCH3-208ENST00000443727 TLX1P31314 330 aaPredicted RBP18.71■□□□□ 0.59
LRCH3-208ENST00000443727 MAGEA12P43365 314 aa18.71■□□□□ 0.59
LRCH3-208ENST00000443727 CCNG1P51959 295 aa18.71■□□□□ 0.59
LRCH3-208ENST00000443727 CASP6P55212 293 aa18.71■□□□□ 0.59
LRCH3-208ENST00000443727 RPS13P62277 151 aaKnown RBP18.71■□□□□ 0.59
LRCH3-208ENST00000443727 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.71■□□□□ 0.59
LRCH3-208ENST00000443727 C7orf57Q8NEG2 295 aa18.71■□□□□ 0.59
LRCH3-208ENST00000443727 SREK1Q8WXA9 508 aaKnown RBP18.71■□□□□ 0.59
LRCH3-208ENST00000443727 FRMD6Q96NE9 622 aa18.71■□□□□ 0.59
LRCH3-208ENST00000443727 OR8D2Q9GZM6 311 aa18.71■□□□□ 0.59
LRCH3-208ENST00000443727 MS4A12Q9NXJ0 267 aa18.71■□□□□ 0.59
LRCH3-208ENST00000443727 PHF11Q9UIL8 331 aa18.71■□□□□ 0.59
LRCH3-208ENST00000443727 TSC22D4Q9Y3Q8 395 aa18.71■□□□□ 0.59
LRCH3-208ENST00000443727 C17orf105B2RV13 164 aa18.7■□□□□ 0.58
LRCH3-208ENST00000443727 NPIPA5E9PKD4 350 aa18.7■□□□□ 0.58
LRCH3-208ENST00000443727 CLDN1O95832 211 aa18.7■□□□□ 0.58
LRCH3-208ENST00000443727 SNRPAP09012 282 aaKnown RBP18.7■□□□□ 0.58
LRCH3-208ENST00000443727 COX7A2P14406 83 aa18.7■□□□□ 0.58
LRCH3-208ENST00000443727 SSR4P51571 173 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms