RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 PSMD12O00232 456 aaPredicted RBP15.06■□□□□ 0
USP39-205ENST00000442708 PROM1O43490 865 aa15.06■□□□□ 0
USP39-205ENST00000442708 DNAJB5O75953 348 aa15.06■□□□□ 0
USP39-205ENST00000442708 IGHEP01854 428 aa15.06■□□□□ 0
USP39-205ENST00000442708 JUNP05412 331 aaKnown RBP15.06■□□□□ 0
USP39-205ENST00000442708 C8orf89P0DMQ9 161 aa15.06■□□□□ 0
USP39-205ENST00000442708 NEFHP12036 1026 aa15.06■□□□□ 0
USP39-205ENST00000442708 COX6A1P12074 109 aa15.06■□□□□ 0
USP39-205ENST00000442708 CPN2P22792 545 aa15.06■□□□□ 0
USP39-205ENST00000442708 GRK2P25098 689 aa15.06■□□□□ 0
USP39-205ENST00000442708 EEF1A2Q05639 463 aaKnown RBP15.06■□□□□ 0
USP39-205ENST00000442708 BTKQ06187 659 aa15.06■□□□□ 0
USP39-205ENST00000442708 PCSK4Q6UW60 755 aa15.06■□□□□ 0
USP39-205ENST00000442708 QSOX2Q6ZRP7 698 aa15.06■□□□□ 0
USP39-205ENST00000442708 RIPOR1Q6ZS17 1223 aa15.06■□□□□ 0
USP39-205ENST00000442708 Q6ZSR9 355 aa15.06■□□□□ 0
USP39-205ENST00000442708 CLNKQ7Z7G1 428 aa15.06■□□□□ 0
USP39-205ENST00000442708 GPR180Q86V85 440 aa15.06■□□□□ 0
USP39-205ENST00000442708 CLYBLQ8N0X4 340 aa15.06■□□□□ 0
USP39-205ENST00000442708 EFCAB3Q8N7B9 438 aa15.06■□□□□ 0
USP39-205ENST00000442708 TWIST2Q8WVJ9 160 aa15.06■□□□□ 0
USP39-205ENST00000442708 NACC2Q96BF6 587 aa15.06■□□□□ 0
USP39-205ENST00000442708 C3orf30Q96M34 536 aa15.06■□□□□ 0
USP39-205ENST00000442708 PTCHD1Q96NR3 888 aa15.06■□□□□ 0
USP39-205ENST00000442708 CATSPER2Q96P56 530 aa15.06■□□□□ 0
USP39-205ENST00000442708 TEX10Q9NXF1 929 aaPredicted RBP15.06■□□□□ 0
USP39-205ENST00000442708 ADAM29Q9UKF5 820 aa15.06■□□□□ 0
USP39-205ENST00000442708 LHX6Q9UPM6 363 aa15.06■□□□□ 0
USP39-205ENST00000442708 DOCK10Q96BY6 2186 aa15.05■□□□□ 0
USP39-205ENST00000442708 IGHV1-45A0A0A0MS14 117 aa15.05■□□□□ -0
USP39-205ENST00000442708 A0A1W2PQ72 361 aa15.05■□□□□ -0
USP39-205ENST00000442708 ARHGAP10A1A4S6 786 aa15.05■□□□□ -0
USP39-205ENST00000442708 PIP5K1BO14986 540 aa15.05■□□□□ -0
USP39-205ENST00000442708 PRMT3O60678 531 aa15.05■□□□□ -0
USP39-205ENST00000442708 SNNO75324 88 aaPredicted RBP15.05■□□□□ -0
USP39-205ENST00000442708 ITGB2P05107 769 aa15.05■□□□□ -0
USP39-205ENST00000442708 ACPPP15309 386 aa15.05■□□□□ -0
USP39-205ENST00000442708 JAK1P23458 1154 aa15.05■□□□□ -0
USP39-205ENST00000442708 PPP2R1BP30154 601 aa15.05■□□□□ -0
USP39-205ENST00000442708 PPP2R2AP63151 447 aa15.05■□□□□ -0
USP39-205ENST00000442708 Q0VFX4 171 aa15.05■□□□□ -0
USP39-205ENST00000442708 PCOLCEQ15113 449 aa15.05■□□□□ -0
USP39-205ENST00000442708 NSDHLQ15738 373 aa15.05■□□□□ -0
USP39-205ENST00000442708 DCAF10Q5QP82 559 aa15.05■□□□□ -0
USP39-205ENST00000442708 CCNYL2Q5T2Q4 361 aa15.05■□□□□ -0
USP39-205ENST00000442708 BORAQ6PGQ7 559 aa15.05■□□□□ -0
USP39-205ENST00000442708 CYP20A1Q6UW02 462 aa15.05■□□□□ -0
USP39-205ENST00000442708 RNF165Q6ZSG1 346 aa15.05■□□□□ -0
USP39-205ENST00000442708 MMP21Q8N119 569 aa15.05■□□□□ -0
USP39-205ENST00000442708 ANKRD9Q96BM1 317 aaPredicted RBP15.05■□□□□ -0
USP39-205ENST00000442708 WDR77Q9BQA1 342 aaPredicted RBP15.05■□□□□ -0
USP39-205ENST00000442708 ING2Q9H160 280 aa15.05■□□□□ -0
USP39-205ENST00000442708 PRDM9Q9NQV7 894 aa15.05■□□□□ -0
USP39-205ENST00000442708 PRTFDC1Q9NRG1 225 aa15.05■□□□□ -0
USP39-205ENST00000442708 NMRK1Q9NWW6 199 aa15.05■□□□□ -0
USP39-205ENST00000442708 AHSPQ9NZD4 102 aa15.05■□□□□ -0
USP39-205ENST00000442708 GIMAP2Q9UG22 337 aa15.05■□□□□ -0
USP39-205ENST00000442708 HAO1Q9UJM8 370 aa15.05■□□□□ -0
USP39-205ENST00000442708 RAP2CQ9Y3L5 183 aa15.05■□□□□ -0
USP39-205ENST00000442708 PIEZO2Q9H5I5 2752 aa15.05■□□□□ -0
USP39-205ENST00000442708 ZFYVE26Q68DK2 2539 aa15.04■□□□□ -0
USP39-205ENST00000442708 TCRBV16S1A1N1A0A5B0 115 aa15.04■□□□□ -0
USP39-205ENST00000442708 GLOD5A6NK44 160 aa15.04■□□□□ -0
USP39-205ENST00000442708 PEX12O00623 359 aa15.04■□□□□ -0
USP39-205ENST00000442708 PGRMC2O15173 223 aa15.04■□□□□ -0
USP39-205ENST00000442708 LDB3O75112 727 aa15.04■□□□□ -0
USP39-205ENST00000442708 SKAP2O75563 359 aaPredicted RBP15.04■□□□□ -0
USP39-205ENST00000442708 AIFM1O95831 613 aa15.04■□□□□ -0
USP39-205ENST00000442708 CYC1P08574 325 aa15.04■□□□□ -0
USP39-205ENST00000442708 HSD17B7P56937 341 aa15.04■□□□□ -0
USP39-205ENST00000442708 TNFRSF17Q02223 184 aa15.04■□□□□ -0
USP39-205ENST00000442708 ID2Q02363 134 aa15.04■□□□□ -0
USP39-205ENST00000442708 KIAA0040Q15053 153 aa15.04■□□□□ -0
USP39-205ENST00000442708 IMPG1Q17R60 797 aa15.04■□□□□ -0
USP39-205ENST00000442708 SPDYAQ5MJ70 313 aa15.04■□□□□ -0
USP39-205ENST00000442708 PAGE2Q7Z2X7 111 aa15.04■□□□□ -0
USP39-205ENST00000442708 CPEB2Q7Z5Q1 589 aaKnown RBP15.04■□□□□ -0
USP39-205ENST00000442708 APLFQ8IW19 511 aaPredicted RBP15.04■□□□□ -0
USP39-205ENST00000442708 ZNF595Q8IYB9 648 aa15.04■□□□□ -0
USP39-205ENST00000442708 ADAMTS18Q8TE60 1221 aa15.04■□□□□ -0
USP39-205ENST00000442708 APOBEC4Q8WW27 367 aaKnown RBP15.04■□□□□ -0
USP39-205ENST00000442708 ZNF75CPQ92670 426 aaPredicted RBP15.04■□□□□ -0
USP39-205ENST00000442708 TM4SF18Q96CE8 201 aa15.04■□□□□ -0
USP39-205ENST00000442708 IP6K3Q96PC2 410 aa15.04■□□□□ -0
USP39-205ENST00000442708 EBPLQ9BY08 206 aa15.04■□□□□ -0
USP39-205ENST00000442708 ZNF700Q9H0M5 742 aa15.04■□□□□ -0
USP39-205ENST00000442708 ACBD3Q9H3P7 528 aa15.04■□□□□ -0
USP39-205ENST00000442708 MANSC1Q9H8J5 431 aa15.04■□□□□ -0
USP39-205ENST00000442708 ZNF160Q9HCG1 818 aa15.04■□□□□ -0
USP39-205ENST00000442708 PNPOQ9NVS9 261 aa15.04■□□□□ -0
USP39-205ENST00000442708 LYARQ9NX58 379 aaKnown RBP15.04■□□□□ -0
USP39-205ENST00000442708 SIRT5Q9NXA8 310 aa15.04■□□□□ -0
USP39-205ENST00000442708 PHF11Q9UIL8 331 aa15.04■□□□□ -0
USP39-205ENST00000442708 MMACHCQ9Y4U1 282 aa15.04■□□□□ -0
USP39-205ENST00000442708 FASNP49327 2511 aaKnown RBP15.04■□□□□ -0
USP39-205ENST00000442708 TNRC6AQ8NDV7 1962 aaKnown RBP15.04■□□□□ -0
USP39-205ENST00000442708 A0A1W2PS29 197 aa15.03■□□□□ -0
USP39-205ENST00000442708 NPIPB8E9PQR5 432 aa15.03■□□□□ -0
USP39-205ENST00000442708 SLC28A1O00337 649 aa15.03■□□□□ -0
USP39-205ENST00000442708 LSM1O15116 133 aaKnown RBP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms