RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 NOBOXO60393 691 aa7.7□□□□□ -1.18
CCDC39-201ENST00000442201 NPPAP01160 153 aa7.7□□□□□ -1.18
CCDC39-201ENST00000442201 TPD52P55327 224 aaPredicted RBP7.7□□□□□ -1.18
CCDC39-201ENST00000442201 FOXM1Q08050 763 aa7.7□□□□□ -1.18
CCDC39-201ENST00000442201 ZNF763Q0D2J5 394 aa7.7□□□□□ -1.18
CCDC39-201ENST00000442201 TRAP1Q12931 704 aaKnown RBP7.7□□□□□ -1.18
CCDC39-201ENST00000442201 MAPKAPK3Q16644 382 aa7.7□□□□□ -1.18
CCDC39-201ENST00000442201 SLC5A12Q1EHB4 618 aa7.7□□□□□ -1.18
CCDC39-201ENST00000442201 PRMT9Q6P2P2 845 aa7.7□□□□□ -1.18
CCDC39-201ENST00000442201 OGFOD3Q6PK18 319 aa7.7□□□□□ -1.18
CCDC39-201ENST00000442201 SPESP1Q6UW49 350 aa7.7□□□□□ -1.18
CCDC39-201ENST00000442201 ZNF600Q6ZNG1 722 aa7.7□□□□□ -1.18
CCDC39-201ENST00000442201 PAGE2Q7Z2X7 111 aa7.7□□□□□ -1.18
CCDC39-201ENST00000442201 KRT77Q7Z794 578 aa7.7□□□□□ -1.18
CCDC39-201ENST00000442201 RIMKLAQ8IXN7 391 aa7.7□□□□□ -1.18
CCDC39-201ENST00000442201 FBXW8Q8N3Y1 598 aa7.7□□□□□ -1.18
CCDC39-201ENST00000442201 MINDY1Q8N5J2 469 aa7.7□□□□□ -1.18
CCDC39-201ENST00000442201 DPP10Q8N608 796 aa7.7□□□□□ -1.18
CCDC39-201ENST00000442201 PIGKQ92643 395 aa7.7□□□□□ -1.18
CCDC39-201ENST00000442201 HPS1Q92902 700 aa7.7□□□□□ -1.18
CCDC39-201ENST00000442201 CCDC124Q96CT7 223 aaKnown RBP7.7□□□□□ -1.18
CCDC39-201ENST00000442201 LRRC58Q96CX6 371 aa7.7□□□□□ -1.18
CCDC39-201ENST00000442201 TMEM74Q96NL1 305 aa7.7□□□□□ -1.18
CCDC39-201ENST00000442201 QRFPRQ96P65 431 aa7.7□□□□□ -1.18
CCDC39-201ENST00000442201 OR52E6Q96RD3 313 aa7.7□□□□□ -1.18
CCDC39-201ENST00000442201 ELF4Q99607 663 aaPredicted RBP7.7□□□□□ -1.18
CCDC39-201ENST00000442201 SLC38A3Q99624 504 aa7.7□□□□□ -1.18
CCDC39-201ENST00000442201 Q9H521 79 aa7.7□□□□□ -1.18
CCDC39-201ENST00000442201 TMEM74BQ9NUR3 256 aa7.7□□□□□ -1.18
CCDC39-201ENST00000442201 PILRBQ9UKJ0 227 aa7.7□□□□□ -1.18
CCDC39-201ENST00000442201 CSNK1G3Q9Y6M4 447 aa7.7□□□□□ -1.18
CCDC39-201ENST00000442201 AP1M2Q9Y6Q5 423 aa7.7□□□□□ -1.18
CCDC39-201ENST00000442201 OR2A25A4D2G3 310 aa7.69□□□□□ -1.18
CCDC39-201ENST00000442201 BET1O15155 118 aa7.69□□□□□ -1.18
CCDC39-201ENST00000442201 PPM1DO15297 605 aa7.69□□□□□ -1.18
CCDC39-201ENST00000442201 NDUFS4O43181 175 aa7.69□□□□□ -1.18
CCDC39-201ENST00000442201 STAMBPO95630 424 aa7.69□□□□□ -1.18
CCDC39-201ENST00000442201 TBX6O95947 436 aaPredicted RBP7.69□□□□□ -1.18
CCDC39-201ENST00000442201 KLK1P06870 262 aa7.69□□□□□ -1.18
CCDC39-201ENST00000442201 TYRP1P17643 537 aa7.69□□□□□ -1.18
CCDC39-201ENST00000442201 CNR2P34972 360 aa7.69□□□□□ -1.18
CCDC39-201ENST00000442201 DPP6P42658 865 aa7.69□□□□□ -1.18
CCDC39-201ENST00000442201 RPS15AP62244 130 aaKnown RBP7.69□□□□□ -1.18
CCDC39-201ENST00000442201 SRSF11Q05519 484 aaKnown RBP7.69□□□□□ -1.18
CCDC39-201ENST00000442201 ATP1A4Q13733 1029 aa7.69□□□□□ -1.18
CCDC39-201ENST00000442201 PGS1Q32NB8 556 aa7.69□□□□□ -1.18
CCDC39-201ENST00000442201 C14orf28Q4W4Y0 310 aa7.69□□□□□ -1.18
CCDC39-201ENST00000442201 TMEM35AQ53FP2 167 aa7.69□□□□□ -1.18
CCDC39-201ENST00000442201 C6orf10Q5SRN2 563 aa7.69□□□□□ -1.18
CCDC39-201ENST00000442201 C1orf146Q5VVC0 180 aa7.69□□□□□ -1.18
CCDC39-201ENST00000442201 FIGLAQ6QHK4 219 aa7.69□□□□□ -1.18
CCDC39-201ENST00000442201 C17orf82Q86X59 251 aaPredicted RBP7.69□□□□□ -1.18
CCDC39-201ENST00000442201 HPS6Q86YV9 775 aa7.69□□□□□ -1.18
CCDC39-201ENST00000442201 TMEM126BQ8IUX1 230 aa7.69□□□□□ -1.18
CCDC39-201ENST00000442201 EFCAB3Q8N7B9 438 aa7.69□□□□□ -1.18
CCDC39-201ENST00000442201 MFSD9Q8NBP5 474 aa7.69□□□□□ -1.18
CCDC39-201ENST00000442201 WDR48Q8TAF3 677 aa7.69□□□□□ -1.18
CCDC39-201ENST00000442201 CREB3L4Q8TEY5 395 aa7.69□□□□□ -1.18
CCDC39-201ENST00000442201 RGMAQ96B86 450 aa7.69□□□□□ -1.18
CCDC39-201ENST00000442201 CEP19Q96LK0 163 aa7.69□□□□□ -1.18
CCDC39-201ENST00000442201 TP63Q9H3D4 680 aaPredicted RBP7.69□□□□□ -1.18
CCDC39-201ENST00000442201 UCK1Q9HA47 277 aa7.69□□□□□ -1.18
CCDC39-201ENST00000442201 C8orf4Q9NR00 106 aa7.69□□□□□ -1.18
CCDC39-201ENST00000442201 TNFRSF10DQ9UBN6 386 aa7.69□□□□□ -1.18
CCDC39-201ENST00000442201 SPAG17Q6Q759 2223 aa7.69□□□□□ -1.18
CCDC39-201ENST00000442201 VCANP13611 3396 aa7.69□□□□□ -1.18
CCDC39-201ENST00000442201 LILRA5A6NI73 299 aa7.69□□□□□ -1.18
CCDC39-201ENST00000442201 FXYD1O00168 92 aa7.69□□□□□ -1.18
CCDC39-201ENST00000442201 PLPP1O14494 284 aa7.69□□□□□ -1.18
CCDC39-201ENST00000442201 TNFSF14O43557 240 aa7.69□□□□□ -1.18
CCDC39-201ENST00000442201 GBAP04062 536 aa7.69□□□□□ -1.18
CCDC39-201ENST00000442201 CAPNS1P04632 268 aa7.69□□□□□ -1.18
CCDC39-201ENST00000442201 COX7A2P14406 83 aa7.69□□□□□ -1.18
CCDC39-201ENST00000442201 HPCAL1P37235 193 aa7.69□□□□□ -1.18
CCDC39-201ENST00000442201 KIR3DL1P43629 444 aa7.69□□□□□ -1.18
CCDC39-201ENST00000442201 HAAOP46952 286 aa7.69□□□□□ -1.18
CCDC39-201ENST00000442201 SLC7A2P52569 658 aa7.69□□□□□ -1.18
CCDC39-201ENST00000442201 C21orf58P58505 322 aa7.69□□□□□ -1.18
CCDC39-201ENST00000442201 CYP4F3Q08477 520 aa7.69□□□□□ -1.18
CCDC39-201ENST00000442201 HKDC1Q2TB90 917 aa7.69□□□□□ -1.18
CCDC39-201ENST00000442201 PIGGQ5H8A4 983 aa7.69□□□□□ -1.18
CCDC39-201ENST00000442201 C8orf82Q6P1X6 216 aaPredicted RBP7.69□□□□□ -1.18
CCDC39-201ENST00000442201 ICA1LQ8NDH6 482 aa7.69□□□□□ -1.18
CCDC39-201ENST00000442201 RSC1A1Q92681 617 aa7.69□□□□□ -1.18
CCDC39-201ENST00000442201 SLC29A1Q99808 456 aa7.69□□□□□ -1.18
CCDC39-201ENST00000442201 REXO4Q9GZR2 422 aaKnown RBP7.69□□□□□ -1.18
CCDC39-201ENST00000442201 RMND5AQ9H871 391 aa7.69□□□□□ -1.18
CCDC39-201ENST00000442201 PACSIN3Q9UKS6 424 aa7.69□□□□□ -1.18
CCDC39-201ENST00000442201 NCOR1O75376 2440 aa7.69□□□□□ -1.18
CCDC39-201ENST00000442201 A0A0J9YY10 115 aa7.69□□□□□ -1.18
CCDC39-201ENST00000442201 LRIT2A6NDA9 550 aa7.69□□□□□ -1.18
CCDC39-201ENST00000442201 A6NL46 340 aa7.69□□□□□ -1.18
CCDC39-201ENST00000442201 CAPN5O15484 640 aaPredicted RBP7.69□□□□□ -1.18
CCDC39-201ENST00000442201 UBXN7O94888 489 aa7.69□□□□□ -1.18
CCDC39-201ENST00000442201 HOXB3P14651 431 aaPredicted RBP7.69□□□□□ -1.18
CCDC39-201ENST00000442201 ME2P23368 584 aa7.69□□□□□ -1.18
CCDC39-201ENST00000442201 PEX2P28328 305 aa7.69□□□□□ -1.18
CCDC39-201ENST00000442201 BNIP3Q12983 259 aa7.69□□□□□ -1.18
CCDC39-201ENST00000442201 CEACAM7Q14002 265 aa7.69□□□□□ -1.18
CCDC39-201ENST00000442201 SIM2Q14190 667 aaPredicted RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms