RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 C10orf62Q5T681 223 aaPredicted RBP7.25□□□□□ -1.25
CD44-211ENST00000442151 LIPJQ5W064 366 aa7.25□□□□□ -1.25
CD44-211ENST00000442151 ARHGAP11AQ6P4F7 1023 aa7.25□□□□□ -1.25
CD44-211ENST00000442151 ABHD17CQ6PCB6 329 aa7.25□□□□□ -1.25
CD44-211ENST00000442151 GK5Q6ZS86 529 aa7.25□□□□□ -1.25
CD44-211ENST00000442151 TAOK1Q7L7X3 1001 aa7.25□□□□□ -1.25
CD44-211ENST00000442151 SLC22A16Q86VW1 577 aa7.25□□□□□ -1.25
CD44-211ENST00000442151 SCUBE1Q8IWY4 988 aa7.25□□□□□ -1.25
CD44-211ENST00000442151 MCEMP1Q8IX19 187 aa7.25□□□□□ -1.25
CD44-211ENST00000442151 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.25□□□□□ -1.25
CD44-211ENST00000442151 SLC15A4Q8N697 577 aa7.25□□□□□ -1.25
CD44-211ENST00000442151 SPATA4Q8NEY3 305 aa7.25□□□□□ -1.25
CD44-211ENST00000442151 C16orf52Q8NHV5 167 aa7.25□□□□□ -1.25
CD44-211ENST00000442151 CHTF18Q8WVB6 975 aa7.25□□□□□ -1.25
CD44-211ENST00000442151 RGMAQ96B86 450 aa7.25□□□□□ -1.25
CD44-211ENST00000442151 RBM18Q96H35 190 aaKnown RBP7.25□□□□□ -1.25
CD44-211ENST00000442151 PDLIM2Q96JY6 352 aa7.25□□□□□ -1.25
CD44-211ENST00000442151 MESP1Q9BRJ9 268 aa7.25□□□□□ -1.25
CD44-211ENST00000442151 ALOXE3Q9BYJ1 711 aa7.25□□□□□ -1.25
CD44-211ENST00000442151 KRTAP4-7Q9BYR0 210 aa7.25□□□□□ -1.25
CD44-211ENST00000442151 KLHL31Q9H511 634 aa7.25□□□□□ -1.25
CD44-211ENST00000442151 NECTIN3Q9NQS3 549 aa7.25□□□□□ -1.25
CD44-211ENST00000442151 AHSPQ9NZD4 102 aa7.25□□□□□ -1.25
CD44-211ENST00000442151 OPTCQ9UBM4 332 aa7.25□□□□□ -1.25
CD44-211ENST00000442151 VTI1BQ9UEU0 232 aa7.25□□□□□ -1.25
CD44-211ENST00000442151 DAPP1Q9UN19 280 aa7.25□□□□□ -1.25
CD44-211ENST00000442151 MTO1Q9Y2Z2 717 aaKnown RBP7.25□□□□□ -1.25
CD44-211ENST00000442151 ACOT9Q9Y305 439 aa7.25□□□□□ -1.25
CD44-211ENST00000442151 PCDHGA11Q9Y5H2 935 aa7.25□□□□□ -1.25
CD44-211ENST00000442151 NCF1BA6NI72 391 aaPredicted RBP7.24□□□□□ -1.25
CD44-211ENST00000442151 FAM159BA6NKW6 160 aa7.24□□□□□ -1.25
CD44-211ENST00000442151 NCF1CA8MVU1 366 aaPredicted RBP7.24□□□□□ -1.25
CD44-211ENST00000442151 K7EPI3 171 aa7.24□□□□□ -1.25
CD44-211ENST00000442151 BCKDKO14874 412 aa7.24□□□□□ -1.25
CD44-211ENST00000442151 ITGA10O75578 1167 aa7.24□□□□□ -1.25
CD44-211ENST00000442151 P04436 131 aa7.24□□□□□ -1.25
CD44-211ENST00000442151 LTA4HP09960 611 aaKnown RBP7.24□□□□□ -1.25
CD44-211ENST00000442151 NCF1P14598 390 aaPredicted RBP7.24□□□□□ -1.25
CD44-211ENST00000442151 CD1DP15813 335 aa7.24□□□□□ -1.25
CD44-211ENST00000442151 CNR1P21554 472 aa7.24□□□□□ -1.25
CD44-211ENST00000442151 CPN2P22792 545 aa7.24□□□□□ -1.25
CD44-211ENST00000442151 BUD31P41223 144 aaPredicted RBP7.24□□□□□ -1.25
CD44-211ENST00000442151 HSPA7P48741 367 aa7.24□□□□□ -1.25
CD44-211ENST00000442151 MEOX1P50221 254 aa7.24□□□□□ -1.25
CD44-211ENST00000442151 PLA2G16P53816 162 aa7.24□□□□□ -1.25
CD44-211ENST00000442151 RPP38P78345 283 aaKnown RBP7.24□□□□□ -1.25
CD44-211ENST00000442151 HYAL2Q12891 473 aa7.24□□□□□ -1.25
CD44-211ENST00000442151 CHIT1Q13231 466 aa7.24□□□□□ -1.25
CD44-211ENST00000442151 RUNX2Q13950 521 aa7.24□□□□□ -1.25
CD44-211ENST00000442151 DOC2AQ14183 400 aa7.24□□□□□ -1.25
CD44-211ENST00000442151 RTL4Q6ZR62 310 aa7.24□□□□□ -1.25
CD44-211ENST00000442151 CEP97Q8IW35 865 aa7.24□□□□□ -1.25
CD44-211ENST00000442151 CPAMD8Q8IZJ3 1885 aa7.24□□□□□ -1.25
CD44-211ENST00000442151 PPM1NQ8N819 430 aa7.24□□□□□ -1.25
CD44-211ENST00000442151 GOLM1Q8NBJ4 401 aa7.24□□□□□ -1.25
CD44-211ENST00000442151 MYRIPQ8NFW9 859 aa7.24□□□□□ -1.25
CD44-211ENST00000442151 RHEBL1Q8TAI7 183 aa7.24□□□□□ -1.25
CD44-211ENST00000442151 FAM57AQ8TBR7 257 aa7.24□□□□□ -1.25
CD44-211ENST00000442151 SLC22A8Q8TCC7 542 aa7.24□□□□□ -1.25
CD44-211ENST00000442151 CA5BP1Q8WTZ4 195 aa7.24□□□□□ -1.25
CD44-211ENST00000442151 NCLNQ969V3 563 aa7.24□□□□□ -1.25
CD44-211ENST00000442151 DTNBP1Q96EV8 351 aa7.24□□□□□ -1.25
CD44-211ENST00000442151 LRRC46Q96FV0 321 aa7.24□□□□□ -1.25
CD44-211ENST00000442151 QRFPRQ96P65 431 aa7.24□□□□□ -1.25
CD44-211ENST00000442151 DGAT2Q96PD7 388 aa7.24□□□□□ -1.25
CD44-211ENST00000442151 DPH5Q9H2P9 285 aa7.24□□□□□ -1.25
CD44-211ENST00000442151 TP63Q9H3D4 680 aaPredicted RBP7.24□□□□□ -1.25
CD44-211ENST00000442151 ANKRD10Q9NXR5 420 aa7.24□□□□□ -1.25
CD44-211ENST00000442151 MTRF1LQ9UGC7 380 aaKnown RBP7.24□□□□□ -1.25
CD44-211ENST00000442151 SH3BGRL2Q9UJC5 107 aa7.24□□□□□ -1.25
CD44-211ENST00000442151 EDARQ9UNE0 448 aa7.24□□□□□ -1.25
CD44-211ENST00000442151 TSC22D4Q9Y3Q8 395 aa7.24□□□□□ -1.25
CD44-211ENST00000442151 POLEQ07864 2286 aa7.24□□□□□ -1.25
CD44-211ENST00000442151 CNTRLQ7Z7A1 2325 aa7.24□□□□□ -1.25
CD44-211ENST00000442151 SCN3AQ9NY46 2000 aa7.24□□□□□ -1.25
CD44-211ENST00000442151 ZGRF1Q86YA3 2104 aa7.24□□□□□ -1.25
CD44-211ENST00000442151 OR14I1A6ND48 311 aa7.24□□□□□ -1.25
CD44-211ENST00000442151 OR2W5A6NFC9 320 aa7.24□□□□□ -1.25
CD44-211ENST00000442151 UGDHO60701 494 aa7.24□□□□□ -1.25
CD44-211ENST00000442151 KERAO60938 352 aa7.24□□□□□ -1.25
CD44-211ENST00000442151 GUCY1B2O75343 617 aa7.24□□□□□ -1.25
CD44-211ENST00000442151 PCNAP12004 261 aa7.24□□□□□ -1.25
CD44-211ENST00000442151 SSTR1P30872 391 aa7.24□□□□□ -1.25
CD44-211ENST00000442151 PEX19P40855 299 aa7.24□□□□□ -1.25
CD44-211ENST00000442151 PIK3CBP42338 1070 aa7.24□□□□□ -1.25
CD44-211ENST00000442151 GDF5P43026 501 aa7.24□□□□□ -1.25
CD44-211ENST00000442151 MSH2P43246 934 aa7.24□□□□□ -1.25
CD44-211ENST00000442151 MAGEA4P43358 317 aa7.24□□□□□ -1.25
CD44-211ENST00000442151 PLTPP55058 493 aa7.24□□□□□ -1.25
CD44-211ENST00000442151 LIM2P55344 173 aa7.24□□□□□ -1.25
CD44-211ENST00000442151 PMP22Q01453 160 aa7.24□□□□□ -1.25
CD44-211ENST00000442151 ACAP2Q15057 778 aa7.24□□□□□ -1.25
CD44-211ENST00000442151 C6orf163Q5TEZ5 329 aa7.24□□□□□ -1.25
CD44-211ENST00000442151 SIAH3Q8IW03 269 aa7.24□□□□□ -1.25
CD44-211ENST00000442151 SULF2Q8IWU5 870 aa7.24□□□□□ -1.25
CD44-211ENST00000442151 SRRM1Q8IYB3 904 aaKnown RBP7.24□□□□□ -1.25
CD44-211ENST00000442151 ZFP62Q8NB50 900 aaPredicted RBP7.24□□□□□ -1.25
CD44-211ENST00000442151 ANKRD49Q8WVL7 239 aa7.24□□□□□ -1.25
CD44-211ENST00000442151 RND1Q92730 232 aa7.24□□□□□ -1.25
CD44-211ENST00000442151 UBXN10Q96LJ8 280 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms