RNA–Protein interactions for RNA: ENST00000440472.6

SPIRE1-204, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 1 (best)

Gene SPIRE1, Length 2,109 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-204ENST00000440472 SIRT3Q9NTG7 399 aaPredicted RBP7.81□□□□□ -1.16
SPIRE1-204ENST00000440472 ACER3Q9NUN7 267 aa7.81□□□□□ -1.16
SPIRE1-204ENST00000440472 TBCCD1Q9NVR7 557 aa7.81□□□□□ -1.16
SPIRE1-204ENST00000440472 NDOR1Q9UHB4 597 aa7.81□□□□□ -1.16
SPIRE1-204ENST00000440472 ACAD8Q9UKU7 415 aa7.81□□□□□ -1.16
SPIRE1-204ENST00000440472 PRAMEF25A6NGN4 478 aa7.8□□□□□ -1.16
SPIRE1-204ENST00000440472 PCDH8O95206 1070 aa7.8□□□□□ -1.16
SPIRE1-204ENST00000440472 RECKO95980 971 aa7.8□□□□□ -1.16
SPIRE1-204ENST00000440472 CEACAM5P06731 702 aa7.8□□□□□ -1.16
SPIRE1-204ENST00000440472 TFPTP0C1Z6 253 aa7.8□□□□□ -1.16
SPIRE1-204ENST00000440472 EN2P19622 333 aaPredicted RBP7.8□□□□□ -1.16
SPIRE1-204ENST00000440472 HTR1BP28222 390 aa7.8□□□□□ -1.16
SPIRE1-204ENST00000440472 NDUFS1P28331 727 aa7.8□□□□□ -1.16
SPIRE1-204ENST00000440472 GRK3P35626 688 aa7.8□□□□□ -1.16
SPIRE1-204ENST00000440472 ANXA11P50995 505 aaKnown RBP7.8□□□□□ -1.16
SPIRE1-204ENST00000440472 MANFP55145 182 aaKnown RBP7.8□□□□□ -1.16
SPIRE1-204ENST00000440472 SMIM11AP58511 58 aa7.8□□□□□ -1.16
SPIRE1-204ENST00000440472 MEF2AQ02078 507 aaPredicted RBP7.8□□□□□ -1.16
SPIRE1-204ENST00000440472 SFSWAPQ12872 951 aaKnown RBP7.8□□□□□ -1.16
SPIRE1-204ENST00000440472 FGL2Q14314 439 aa7.8□□□□□ -1.16
SPIRE1-204ENST00000440472 MLF2Q15773 248 aaPredicted RBP7.8□□□□□ -1.16
SPIRE1-204ENST00000440472 TBCEQ15813 527 aaPredicted RBP7.8□□□□□ -1.16
SPIRE1-204ENST00000440472 UAP1L1Q3KQV9 507 aa7.8□□□□□ -1.16
SPIRE1-204ENST00000440472 LAIR1Q6GTX8 287 aa7.8□□□□□ -1.16
SPIRE1-204ENST00000440472 OR4C11Q6IEV9 310 aa7.8□□□□□ -1.16
SPIRE1-204ENST00000440472 SYCE2Q6PIF2 218 aa7.8□□□□□ -1.16
SPIRE1-204ENST00000440472 ENTHD1Q8IYW4 607 aa7.8□□□□□ -1.16
SPIRE1-204ENST00000440472 LINC00471Q8N535 108 aa7.8□□□□□ -1.16
SPIRE1-204ENST00000440472 LINC01555Q8NAE3 123 aa7.8□□□□□ -1.16
SPIRE1-204ENST00000440472 OR2A1Q8NGT9 310 aa7.8□□□□□ -1.16
SPIRE1-204ENST00000440472 FNDC8Q8TC99 324 aa7.8□□□□□ -1.16
SPIRE1-204ENST00000440472 APH1BQ8WW43 257 aa7.8□□□□□ -1.16
SPIRE1-204ENST00000440472 NR4A3Q92570 626 aa7.8□□□□□ -1.16
SPIRE1-204ENST00000440472 MYDGFQ969H8 173 aa7.8□□□□□ -1.16
SPIRE1-204ENST00000440472 F2RL3Q96RI0 385 aa7.8□□□□□ -1.16
SPIRE1-204ENST00000440472 CSF3RQ99062 836 aa7.8□□□□□ -1.16
SPIRE1-204ENST00000440472 FEVQ99581 238 aa7.8□□□□□ -1.16
SPIRE1-204ENST00000440472 PLA2G2FQ9BZM2 168 aa7.8□□□□□ -1.16
SPIRE1-204ENST00000440472 ACOT13Q9NPJ3 140 aa7.8□□□□□ -1.16
SPIRE1-204ENST00000440472 CUEDC1Q9NWM3 386 aaPredicted RBP7.8□□□□□ -1.16
SPIRE1-204ENST00000440472 ETAA1Q9NY74 926 aa7.8□□□□□ -1.16
SPIRE1-204ENST00000440472 PSORS1C1Q9UIG5 152 aa7.8□□□□□ -1.16
SPIRE1-204ENST00000440472 COLQQ9Y215 455 aaPredicted RBP7.8□□□□□ -1.16
SPIRE1-204ENST00000440472 TDRKHQ9Y2W6 561 aaKnown RBP7.8□□□□□ -1.16
SPIRE1-204ENST00000440472 DSPPQ9NZW4 1301 aa7.79□□□□□ -1.16
SPIRE1-204ENST00000440472 OR2A25A4D2G3 310 aa7.79□□□□□ -1.16
SPIRE1-204ENST00000440472 LRIT2A6NDA9 550 aa7.79□□□□□ -1.16
SPIRE1-204ENST00000440472 SAP18O00422 153 aaKnown RBP7.79□□□□□ -1.16
SPIRE1-204ENST00000440472 PCDHGA12O60330 932 aa7.79□□□□□ -1.16
SPIRE1-204ENST00000440472 BCAS1O75363 584 aaPredicted RBP7.79□□□□□ -1.16
SPIRE1-204ENST00000440472 SH3BGRLO75368 114 aa7.79□□□□□ -1.16
SPIRE1-204ENST00000440472 SLITRK5O94991 958 aa7.79□□□□□ -1.16
SPIRE1-204ENST00000440472 DIRAS1O95057 198 aa7.79□□□□□ -1.16
SPIRE1-204ENST00000440472 MFN2O95140 757 aa7.79□□□□□ -1.16
SPIRE1-204ENST00000440472 ADAP00813 363 aa7.79□□□□□ -1.16
SPIRE1-204ENST00000440472 IFNW1P05000 195 aa7.79□□□□□ -1.16
SPIRE1-204ENST00000440472 ZNF12P17014 697 aa7.79□□□□□ -1.16
SPIRE1-204ENST00000440472 ST13P50502 369 aaKnown RBP7.79□□□□□ -1.16
SPIRE1-204ENST00000440472 SGCGQ13326 291 aa7.79□□□□□ -1.16
SPIRE1-204ENST00000440472 TSTA3Q13630 321 aaPredicted RBP7.79□□□□□ -1.16
SPIRE1-204ENST00000440472 GNA13Q14344 377 aa7.79□□□□□ -1.16
SPIRE1-204ENST00000440472 CEBPEQ15744 281 aa7.79□□□□□ -1.16
SPIRE1-204ENST00000440472 FBXO43Q4G163 708 aa7.79□□□□□ -1.16
SPIRE1-204ENST00000440472 IER5LQ5T953 404 aa7.79□□□□□ -1.16
SPIRE1-204ENST00000440472 ZNF770Q6IQ21 691 aaPredicted RBP7.79□□□□□ -1.16
SPIRE1-204ENST00000440472 USP30Q70CQ3 517 aa7.79□□□□□ -1.16
SPIRE1-204ENST00000440472 C6orf120Q7Z4R8 191 aa7.79□□□□□ -1.16
SPIRE1-204ENST00000440472 GALNT10Q86SR1 603 aa7.79□□□□□ -1.16
SPIRE1-204ENST00000440472 LGI4Q8N135 537 aa7.79□□□□□ -1.16
SPIRE1-204ENST00000440472 SLC5A8Q8N695 610 aa7.79□□□□□ -1.16
SPIRE1-204ENST00000440472 ZNF513Q8N8E2 541 aaPredicted RBP7.79□□□□□ -1.16
SPIRE1-204ENST00000440472 C9orf43Q8TAL5 461 aaPredicted RBP7.79□□□□□ -1.16
SPIRE1-204ENST00000440472 SGCDQ92629 289 aa7.79□□□□□ -1.16
SPIRE1-204ENST00000440472 CRELD1Q96HD1 420 aa7.79□□□□□ -1.16
SPIRE1-204ENST00000440472 FERD3LQ96RJ6 166 aa7.79□□□□□ -1.16
SPIRE1-204ENST00000440472 ZNF607Q96SK3 696 aa7.79□□□□□ -1.16
SPIRE1-204ENST00000440472 SLC17A9Q9BYT1 436 aa7.79□□□□□ -1.16
SPIRE1-204ENST00000440472 ZNF556Q9HAH1 456 aa7.79□□□□□ -1.16
SPIRE1-204ENST00000440472 SLAMF7Q9NQ25 335 aa7.79□□□□□ -1.16
SPIRE1-204ENST00000440472 TBC1D23Q9NUY8 699 aa7.79□□□□□ -1.16
SPIRE1-204ENST00000440472 CNOT2Q9NZN8 540 aaKnown RBP7.79□□□□□ -1.16
SPIRE1-204ENST00000440472 ERVK-18Q9QC07 812 aa7.79□□□□□ -1.16
SPIRE1-204ENST00000440472 PCOLCE2Q9UKZ9 415 aa7.79□□□□□ -1.16
SPIRE1-204ENST00000440472 PLAGL1Q9UM63 463 aa7.79□□□□□ -1.16
SPIRE1-204ENST00000440472 RNF6Q9Y252 685 aa7.79□□□□□ -1.16
SPIRE1-204ENST00000440472 YBX2Q9Y2T7 364 aaKnown RBP7.79□□□□□ -1.16
SPIRE1-204ENST00000440472 FAM32AQ9Y421 112 aaKnown RBP7.79□□□□□ -1.16
SPIRE1-204ENST00000440472 MAP4K5Q9Y4K4 846 aa7.79□□□□□ -1.16
SPIRE1-204ENST00000440472 NUMA1Q14980 2115 aa7.79□□□□□ -1.16
SPIRE1-204ENST00000440472 IGKV1-8A0A0C4DH67 115 aa7.79□□□□□ -1.16
SPIRE1-204ENST00000440472 PRAMEF33A0A0G2JMD5 474 aa7.79□□□□□ -1.16
SPIRE1-204ENST00000440472 A0A1B0GVG6 124 aa7.79□□□□□ -1.16
SPIRE1-204ENST00000440472 CLCA1A8K7I4 914 aa7.79□□□□□ -1.16
SPIRE1-204ENST00000440472 PTGES3LE9PB15 166 aa7.79□□□□□ -1.16
SPIRE1-204ENST00000440472 H7BY64 318 aa7.79□□□□□ -1.16
SPIRE1-204ENST00000440472 K7EQS6 105 aa7.79□□□□□ -1.16
SPIRE1-204ENST00000440472 TOR1BO14657 336 aa7.79□□□□□ -1.16
SPIRE1-204ENST00000440472 XPNPEP2O43895 674 aa7.79□□□□□ -1.16
SPIRE1-204ENST00000440472 TMPRSS11DO60235 418 aa7.79□□□□□ -1.16
SPIRE1-204ENST00000440472 PRAMEF10O60809 474 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms