RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 ENTPD1P49961 510 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 AGTR2P50052 363 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 ZNF84P51523 738 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 NAGLUP54802 743 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 CDH4P55283 916 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 CDH15P55291 814 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 P2RX3P56373 397 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 ACTR3P61158 418 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 MAXP61244 160 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 PRAMEP78395 509 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 ZXDBP98169 803 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 GNA12Q03113 381 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 ACVR1Q04771 509 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 EPS8Q12929 822 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 DLG1Q12959 904 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 CHAF1BQ13112 559 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 ZNF177Q13360 481 aaPredicted RBP3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 CUL3Q13618 768 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 ZNF235Q14590 738 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 GPNMBQ14956 572 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 HERC3Q15034 1050 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 RCN1Q15293 331 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 USP41Q3LFD5 358 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 ARL13AQ5H913 290 aaPredicted RBP3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 SIRPB2Q5JXA9 342 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 HECTD3Q5T447 861 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 C1orf146Q5VVC0 180 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 SEL1L3Q68CR1 1132 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 ZNF470Q6ECI4 717 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 NADSYN1Q6IA69 706 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 FAM45BPQ6NSW5 357 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 AAGABQ6PD74 315 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 ZNF474Q6S9Z5 364 aaPredicted RBP3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 KLHL24Q6TFL4 600 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 PRSS55Q6UWB4 352 aaPredicted RBP3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 LRRC74BQ6ZQY2 392 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 IKBIPQ70UQ0 350 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 PTAR1Q7Z6K3 402 aaPredicted RBP3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 ADGRG6Q86SQ4 1221 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 SETD3Q86TU7 594 aaPredicted RBP3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 SLC22A9Q8IVM8 553 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 MFSD6LQ8IWD5 586 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 KIRREL3Q8IZU9 778 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 LSMEM2Q8N112 164 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 LRRC43Q8N309 656 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 PGBD5Q8N414 524 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 SPATA6LQ8N4H0 392 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 CCNYL1Q8N7R7 359 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 OR52N4Q8NGI2 321 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 OR13J1Q8NGT2 312 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 FAM45AQ8TCE6 357 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 MAPK15Q8TD08 544 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 BRSK1Q8TDC3 778 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 WIPF2Q8TF74 440 aaPredicted RBP3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 DNAJC9Q8WXX5 260 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 N4BP2L2Q92802 583 aaPredicted RBP3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 SGF29Q96ES7 293 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 ZNF419Q96HQ0 510 aaPredicted RBP3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 RADILQ96JH8 1075 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 FEM1CQ96JP0 617 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 CAPNS2Q96L46 248 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 PIP5K1AQ99755 562 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 OLFM1Q99784 485 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 OMDQ99983 421 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 SEMA3CQ99985 751 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 DDX50Q9BQ39 737 aaKnown RBP3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 PIMREGQ9BSJ6 248 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 ELOVL1Q9BW60 279 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 CTDSP1Q9GZU7 261 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 NACA2Q9H009 215 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 MFSD1Q9H3U5 465 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 YY1AP1Q9H869 796 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 SFXN1Q9H9B4 322 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 TRPC7Q9HCX4 862 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 PCDHB16Q9NRJ7 776 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 HCFC1R1Q9NWW0 138 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 NDE1Q9NXR1 346 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 PLK2Q9NYY3 685 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 NCKIPSDQ9NZQ3 722 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 STX18Q9P2W9 335 aaKnown RBP3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 MTRRQ9UBK8 725 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 UXTQ9UBK9 157 aaPredicted RBP3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 SLC7A8Q9UHI5 535 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 SLCO3A1Q9UIG8 710 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 ZDHHC2Q9UIJ5 367 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 RPS6KA6Q9UK32 745 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 SUFUQ9UMX1 484 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 OSGIN2Q9Y236 505 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 LYVE1Q9Y5Y7 322 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 ZFP37Q9Y6Q3 630 aaPredicted RBP3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 SCN10AQ9Y5Y9 1956 aa3.32□□□□□ -1.88
HMGB3P11-201ENST00000440127 TRIP11Q15643 1979 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 A0A0D9SEW6 157 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 RPS10-NUDT3A0A1W2PQS6 291 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 ILVBLA1L0T0 632 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 CCDC162PA2VCL2 907 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 ZNF840PA6NDX5 716 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 OR51F1A6NGY5 319 aa3.31□□□□□ -1.88
HMGB3P11-201ENST00000440127 LIPT2A6NK58 231 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms