RNA–Protein interactions for RNA: ENST00000439936.6

COPS3-203, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5 BASIC

Gene COPS3, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-203ENST00000439936 SREK1Q8WXA9 508 aaKnown RBP7.05□□□□□ -1.28
COPS3-203ENST00000439936 GAL3ST3Q96A11 431 aa7.05□□□□□ -1.28
COPS3-203ENST00000439936 CMTM7Q96FZ5 175 aa7.05□□□□□ -1.28
COPS3-203ENST00000439936 FAR2Q96K12 515 aa7.05□□□□□ -1.28
COPS3-203ENST00000439936 GATA5Q9BWX5 397 aaPredicted RBP7.05□□□□□ -1.28
COPS3-203ENST00000439936 REXO4Q9GZR2 422 aaKnown RBP7.05□□□□□ -1.28
COPS3-203ENST00000439936 IQCGQ9H095 443 aaKnown RBP7.05□□□□□ -1.28
COPS3-203ENST00000439936 OR51B5Q9H339 312 aa7.05□□□□□ -1.28
COPS3-203ENST00000439936 GSTO2Q9H4Y5 243 aa7.05□□□□□ -1.28
COPS3-203ENST00000439936 WDR54Q9H977 334 aa7.05□□□□□ -1.28
COPS3-203ENST00000439936 CLK4Q9HAZ1 481 aaKnown RBP7.05□□□□□ -1.28
COPS3-203ENST00000439936 TMBIM4Q9HC24 238 aa7.05□□□□□ -1.28
COPS3-203ENST00000439936 FARSBQ9NSD9 589 aaKnown RBP7.05□□□□□ -1.28
COPS3-203ENST00000439936 PSD3Q9NYI0 1048 aa7.05□□□□□ -1.28
COPS3-203ENST00000439936 HCN3Q9P1Z3 774 aa7.05□□□□□ -1.28
COPS3-203ENST00000439936 PADI2Q9Y2J8 665 aa7.05□□□□□ -1.28
COPS3-203ENST00000439936 PCSK5Q92824 1860 aa7.04□□□□□ -1.28
COPS3-203ENST00000439936 LOC400499M0QZD8 3231 aa7.04□□□□□ -1.28
COPS3-203ENST00000439936 IDSB3KWA1 339 aa7.04□□□□□ -1.28
COPS3-203ENST00000439936 FAM227AF5H4B4 570 aa7.04□□□□□ -1.28
COPS3-203ENST00000439936 FOXE1O00358 373 aaPredicted RBP7.04□□□□□ -1.28
COPS3-203ENST00000439936 SAP18O00422 153 aaKnown RBP7.04□□□□□ -1.28
COPS3-203ENST00000439936 RTCAO00442 366 aaKnown RBP7.04□□□□□ -1.28
COPS3-203ENST00000439936 UBFD1O14562 309 aaKnown RBP7.04□□□□□ -1.28
COPS3-203ENST00000439936 MLYCDO95822 493 aa7.04□□□□□ -1.28
COPS3-203ENST00000439936 CELA3AP09093 270 aa7.04□□□□□ -1.28
COPS3-203ENST00000439936 MYZAPP0CAP1 466 aa7.04□□□□□ -1.28
COPS3-203ENST00000439936 NEFHP12036 1026 aa7.04□□□□□ -1.28
COPS3-203ENST00000439936 MMP11P24347 488 aa7.04□□□□□ -1.28
COPS3-203ENST00000439936 SERPINB1P30740 379 aa7.04□□□□□ -1.28
COPS3-203ENST00000439936 OTX2P32243 289 aa7.04□□□□□ -1.28
COPS3-203ENST00000439936 ETV4P43268 484 aa7.04□□□□□ -1.28
COPS3-203ENST00000439936 XCR1P46094 333 aa7.04□□□□□ -1.28
COPS3-203ENST00000439936 PKNOX1P55347 436 aa7.04□□□□□ -1.28
COPS3-203ENST00000439936 NAA20P61599 178 aa7.04□□□□□ -1.28
COPS3-203ENST00000439936 OLR1P78380 273 aa7.04□□□□□ -1.28
COPS3-203ENST00000439936 RHDQ02161 417 aa7.04□□□□□ -1.28
COPS3-203ENST00000439936 DMTNQ08495 405 aa7.04□□□□□ -1.28
COPS3-203ENST00000439936 AP5B1Q2VPB7 878 aa7.04□□□□□ -1.28
COPS3-203ENST00000439936 GGTA1PQ4G0N0 100 aa7.04□□□□□ -1.28
COPS3-203ENST00000439936 SGO1Q5FBB7 561 aa7.04□□□□□ -1.28
COPS3-203ENST00000439936 KHDRBS2Q5VWX1 349 aaKnown RBP7.04□□□□□ -1.28
COPS3-203ENST00000439936 LIPMQ5VYY2 423 aa7.04□□□□□ -1.28
COPS3-203ENST00000439936 FRG2Q64ET8 278 aa7.04□□□□□ -1.28
COPS3-203ENST00000439936 OR4C11Q6IEV9 310 aa7.04□□□□□ -1.28
COPS3-203ENST00000439936 NIPAL1Q6NVV3 410 aa7.04□□□□□ -1.28
COPS3-203ENST00000439936 TRIM40Q6P9F5 258 aa7.04□□□□□ -1.28
COPS3-203ENST00000439936 CDYL2Q8N8U2 506 aa7.04□□□□□ -1.28
COPS3-203ENST00000439936 PLPP5Q8NEB5 264 aa7.04□□□□□ -1.28
COPS3-203ENST00000439936 SRFBP1Q8NEF9 429 aaKnown RBP7.04□□□□□ -1.28
COPS3-203ENST00000439936 METTL6Q8TCB7 284 aa7.04□□□□□ -1.28
COPS3-203ENST00000439936 UBASH3BQ8TF42 649 aa7.04□□□□□ -1.28
COPS3-203ENST00000439936 THAP4Q8WY91 577 aa7.04□□□□□ -1.28
COPS3-203ENST00000439936 EXTL1Q92935 676 aa7.04□□□□□ -1.28
COPS3-203ENST00000439936 RGMAQ96B86 450 aa7.04□□□□□ -1.28
COPS3-203ENST00000439936 REPS1Q96D71 796 aa7.04□□□□□ -1.28
COPS3-203ENST00000439936 PEX11GQ96HA9 241 aa7.04□□□□□ -1.28
COPS3-203ENST00000439936 CNDP1Q96KN2 507 aa7.04□□□□□ -1.28
COPS3-203ENST00000439936 CATSPER2Q96P56 530 aa7.04□□□□□ -1.28
COPS3-203ENST00000439936 FRG2BQ96QU4 278 aa7.04□□□□□ -1.28
COPS3-203ENST00000439936 ZNF382Q96SR6 550 aa7.04□□□□□ -1.28
COPS3-203ENST00000439936 MESP1Q9BRJ9 268 aa7.04□□□□□ -1.28
COPS3-203ENST00000439936 TBCDQ9BTW9 1192 aa7.04□□□□□ -1.28
COPS3-203ENST00000439936 MECRQ9BV79 373 aa7.04□□□□□ -1.28
COPS3-203ENST00000439936 MRPL18Q9H0U6 180 aaKnown RBP7.04□□□□□ -1.28
COPS3-203ENST00000439936 SSU72Q9NP77 194 aaKnown RBP7.04□□□□□ -1.28
COPS3-203ENST00000439936 KCNK9Q9NPC2 374 aa7.04□□□□□ -1.28
COPS3-203ENST00000439936 KCMF1Q9P0J7 381 aa7.04□□□□□ -1.28
COPS3-203ENST00000439936 MID2Q9UJV3 735 aa7.04□□□□□ -1.28
COPS3-203ENST00000439936 C3orf18Q9UK00 162 aa7.04□□□□□ -1.28
COPS3-203ENST00000439936 NXT1Q9UKK6 140 aaKnown RBP7.04□□□□□ -1.28
COPS3-203ENST00000439936 POLHQ9Y253 713 aa7.04□□□□□ -1.28
COPS3-203ENST00000439936 TIMM22Q9Y584 194 aa7.04□□□□□ -1.28
COPS3-203ENST00000439936 ACTL7BQ9Y614 415 aa7.04□□□□□ -1.28
COPS3-203ENST00000439936 ZFHX4Q86UP3 3567 aa7.03□□□□□ -1.28
COPS3-203ENST00000439936 MASP2O00187 686 aa7.03□□□□□ -1.28
COPS3-203ENST00000439936 MANBAO00462 879 aa7.03□□□□□ -1.28
COPS3-203ENST00000439936 SOCS6O14544 535 aa7.03□□□□□ -1.28
COPS3-203ENST00000439936 B4GALT2O60909 372 aa7.03□□□□□ -1.28
COPS3-203ENST00000439936 ETHE1O95571 254 aa7.03□□□□□ -1.28
COPS3-203ENST00000439936 ESRRBO95718 433 aa7.03□□□□□ -1.28
COPS3-203ENST00000439936 PDYNP01213 254 aa7.03□□□□□ -1.28
COPS3-203ENST00000439936 IGHEP01854 428 aa7.03□□□□□ -1.28
COPS3-203ENST00000439936 HEXBP07686 556 aa7.03□□□□□ -1.28
COPS3-203ENST00000439936 BPGMP07738 259 aa7.03□□□□□ -1.28
COPS3-203ENST00000439936 RNH1P13489 461 aaKnown RBP7.03□□□□□ -1.28
COPS3-203ENST00000439936 IL10P22301 178 aa7.03□□□□□ -1.28
COPS3-203ENST00000439936 ATP5A1P25705 553 aaKnown RBP7.03□□□□□ -1.28
COPS3-203ENST00000439936 SERPINB3P29508 390 aa7.03□□□□□ -1.28
COPS3-203ENST00000439936 HPDP32754 393 aaPredicted RBP7.03□□□□□ -1.28
COPS3-203ENST00000439936 BSGP35613 385 aa7.03□□□□□ -1.28
COPS3-203ENST00000439936 EFNA3P52797 238 aa7.03□□□□□ -1.28
COPS3-203ENST00000439936 MTTPP55157 894 aa7.03□□□□□ -1.28
COPS3-203ENST00000439936 SKP1P63208 163 aa7.03□□□□□ -1.28
COPS3-203ENST00000439936 BTG2P78543 158 aa7.03□□□□□ -1.28
COPS3-203ENST00000439936 TGM3Q08188 693 aa7.03□□□□□ -1.28
COPS3-203ENST00000439936 ASPHQ12797 758 aa7.03□□□□□ -1.28
COPS3-203ENST00000439936 LCP2Q13094 533 aa7.03□□□□□ -1.28
COPS3-203ENST00000439936 IFT88Q13099 833 aa7.03□□□□□ -1.28
COPS3-203ENST00000439936 CUL3Q13618 768 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms