RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 LYRM1O43325 122 aa12.79□□□□□ -0.36
ACTN1-204ENST00000438964 HRO43593 1189 aa12.79□□□□□ -0.36
ACTN1-204ENST00000438964 NTN1O95631 604 aa12.79□□□□□ -0.36
ACTN1-204ENST00000438964 C1SP09871 688 aa12.79□□□□□ -0.36
ACTN1-204ENST00000438964 ANXA8P13928 327 aa12.79□□□□□ -0.36
ACTN1-204ENST00000438964 CR2P20023 1033 aa12.79□□□□□ -0.36
ACTN1-204ENST00000438964 PTGER1P34995 402 aa12.79□□□□□ -0.36
ACTN1-204ENST00000438964 OPRD1P41143 372 aa12.79□□□□□ -0.36
ACTN1-204ENST00000438964 ARF5P84085 180 aa12.79□□□□□ -0.36
ACTN1-204ENST00000438964 IRF8Q02556 426 aa12.79□□□□□ -0.36
ACTN1-204ENST00000438964 SCARB2Q14108 478 aa12.79□□□□□ -0.36
ACTN1-204ENST00000438964 XKR6Q5GH73 641 aa12.79□□□□□ -0.36
ACTN1-204ENST00000438964 UNC5DQ6UXZ4 953 aa12.79□□□□□ -0.36
ACTN1-204ENST00000438964 DEF8Q6ZN54 512 aa12.79□□□□□ -0.36
ACTN1-204ENST00000438964 OR4C15Q8NGM1 316 aa12.79□□□□□ -0.36
ACTN1-204ENST00000438964 SLC25A46Q96AG3 418 aa12.79□□□□□ -0.36
ACTN1-204ENST00000438964 ADAM2Q99965 735 aa12.79□□□□□ -0.36
ACTN1-204ENST00000438964 KATNB1Q9BVA0 655 aa12.79□□□□□ -0.36
ACTN1-204ENST00000438964 DRGXA6NNA5 263 aa12.79□□□□□ -0.36
ACTN1-204ENST00000438964 LANCL1O43813 399 aa12.79□□□□□ -0.36
ACTN1-204ENST00000438964 PAHP00439 452 aa12.79□□□□□ -0.36
ACTN1-204ENST00000438964 ANXA4P09525 319 aaPredicted RBP12.79□□□□□ -0.36
ACTN1-204ENST00000438964 GJA1P17302 382 aa12.79□□□□□ -0.36
ACTN1-204ENST00000438964 MYL12AP19105 171 aa12.79□□□□□ -0.36
ACTN1-204ENST00000438964 PRPS1L1P21108 318 aa12.79□□□□□ -0.36
ACTN1-204ENST00000438964 CCR7P32248 378 aa12.79□□□□□ -0.36
ACTN1-204ENST00000438964 NNMTP40261 264 aa12.79□□□□□ -0.36
ACTN1-204ENST00000438964 YBEYP58557 167 aaPredicted RBP12.79□□□□□ -0.36
ACTN1-204ENST00000438964 RHOAP61586 193 aa12.79□□□□□ -0.36
ACTN1-204ENST00000438964 PLEKHM3Q6ZWE6 761 aa12.79□□□□□ -0.36
ACTN1-204ENST00000438964 OR11H4Q8NGC9 324 aa12.79□□□□□ -0.36
ACTN1-204ENST00000438964 NACC2Q96BF6 587 aa12.79□□□□□ -0.36
ACTN1-204ENST00000438964 SPATA9Q9BWV2 254 aa12.79□□□□□ -0.36
ACTN1-204ENST00000438964 FBXO9Q9UK97 447 aaPredicted RBP12.79□□□□□ -0.36
ACTN1-204ENST00000438964 LOC105369274A0A096LPK9 316 aa12.78□□□□□ -0.36
ACTN1-204ENST00000438964 TRBC2A0A5B9 178 aa12.78□□□□□ -0.36
ACTN1-204ENST00000438964 E7EQ34 232 aa12.78□□□□□ -0.36
ACTN1-204ENST00000438964 ATP6V1G2-DDX39BF2Z307 99 aa12.78□□□□□ -0.36
ACTN1-204ENST00000438964 C1QBP02746 253 aa12.78□□□□□ -0.36
ACTN1-204ENST00000438964 PEPDP12955 493 aa12.78□□□□□ -0.36
ACTN1-204ENST00000438964 CSTF2P33240 577 aaKnown RBP eCLIP12.78□□□□□ -0.36
ACTN1-204ENST00000438964 SRP9P49458 86 aaKnown RBP12.78□□□□□ -0.36
ACTN1-204ENST00000438964 MEF2AQ02078 507 aaPredicted RBP12.78□□□□□ -0.36
ACTN1-204ENST00000438964 RPA4Q13156 261 aa12.78□□□□□ -0.36
ACTN1-204ENST00000438964 EIF4HQ15056 248 aaKnown RBP12.78□□□□□ -0.36
ACTN1-204ENST00000438964 XKRXQ6PP77 449 aa12.78□□□□□ -0.36
ACTN1-204ENST00000438964 LHFPL3Q86UP9 236 aa12.78□□□□□ -0.36
ACTN1-204ENST00000438964 SLC30A8Q8IWU4 369 aa12.78□□□□□ -0.36
ACTN1-204ENST00000438964 OR4N4Q8N0Y3 316 aa12.78□□□□□ -0.36
ACTN1-204ENST00000438964 CARNMT1Q8N4J0 409 aa12.78□□□□□ -0.36
ACTN1-204ENST00000438964 GALNT11Q8NCW6 608 aa12.78□□□□□ -0.36
ACTN1-204ENST00000438964 TM9SF4Q92544 642 aa12.78□□□□□ -0.36
ACTN1-204ENST00000438964 TBC1D20Q96BZ9 403 aa12.78□□□□□ -0.36
ACTN1-204ENST00000438964 SLC35A5Q9BS91 424 aa12.78□□□□□ -0.36
ACTN1-204ENST00000438964 PADI3Q9ULW8 664 aa12.78□□□□□ -0.36
ACTN1-204ENST00000438964 SLC9A8Q9Y2E8 581 aa12.78□□□□□ -0.36
ACTN1-204ENST00000438964 PADI2Q9Y2J8 665 aa12.78□□□□□ -0.36
ACTN1-204ENST00000438964 LSM2Q9Y333 95 aaKnown RBP12.78□□□□□ -0.36
ACTN1-204ENST00000438964 HYKKA2RU49 373 aa12.78□□□□□ -0.36
ACTN1-204ENST00000438964 SNTNA6NMZ2 147 aa12.78□□□□□ -0.36
ACTN1-204ENST00000438964 FADS2P1A8MWK0 482 aa12.78□□□□□ -0.36
ACTN1-204ENST00000438964 INMT-MINDY4F8WBC2 141 aa12.78□□□□□ -0.36
ACTN1-204ENST00000438964 SMAD6O43541 496 aaKnown RBP12.78□□□□□ -0.36
ACTN1-204ENST00000438964 ALDH1A1P00352 501 aa12.78□□□□□ -0.36
ACTN1-204ENST00000438964 CCT3P49368 545 aaKnown RBP12.78□□□□□ -0.36
ACTN1-204ENST00000438964 LIM2P55344 173 aa12.78□□□□□ -0.36
ACTN1-204ENST00000438964 RPL6Q02878 288 aaKnown RBP12.78□□□□□ -0.36
ACTN1-204ENST00000438964 TLE2Q04725 743 aa12.78□□□□□ -0.36
ACTN1-204ENST00000438964 CSTF1Q05048 431 aaKnown RBP12.78□□□□□ -0.36
ACTN1-204ENST00000438964 MGAT3Q09327 533 aa12.78□□□□□ -0.36
ACTN1-204ENST00000438964 C2orf80Q0P641 193 aa12.78□□□□□ -0.36
ACTN1-204ENST00000438964 DUSP4Q13115 394 aa12.78□□□□□ -0.36
ACTN1-204ENST00000438964 CCSMST1Q4G0I0 132 aa12.78□□□□□ -0.36
ACTN1-204ENST00000438964 GPRC6AQ5T6X5 926 aa12.78□□□□□ -0.36
ACTN1-204ENST00000438964 SPRYD7Q5W111 196 aa12.78□□□□□ -0.36
ACTN1-204ENST00000438964 TNFAIP8L2Q6P589 184 aaPredicted RBP12.78□□□□□ -0.36
ACTN1-204ENST00000438964 ERICH5Q6P6B1 374 aa12.78□□□□□ -0.36
ACTN1-204ENST00000438964 C19orf48Q6RUI8 117 aa12.78□□□□□ -0.36
ACTN1-204ENST00000438964 CEACAM20Q6UY09 585 aa12.78□□□□□ -0.36
ACTN1-204ENST00000438964 CHMP1BQ7LBR1 199 aa12.78□□□□□ -0.36
ACTN1-204ENST00000438964 KRT74Q7RTS7 529 aa12.78□□□□□ -0.36
ACTN1-204ENST00000438964 HS6ST3Q8IZP7 471 aa12.78□□□□□ -0.36
ACTN1-204ENST00000438964 HJURPQ8NCD3 748 aaPredicted RBP12.78□□□□□ -0.36
ACTN1-204ENST00000438964 CEP76Q8TAP6 659 aa12.78□□□□□ -0.36
ACTN1-204ENST00000438964 CMTM7Q96FZ5 175 aa12.78□□□□□ -0.36
ACTN1-204ENST00000438964 TMEM80Q96HE8 168 aa12.78□□□□□ -0.36
ACTN1-204ENST00000438964 SLC29A3Q9BZD2 475 aa12.78□□□□□ -0.36
ACTN1-204ENST00000438964 ALPK3Q96L96 1907 aa12.78□□□□□ -0.36
ACTN1-204ENST00000438964 SHISA3A0PJX4 238 aa12.78□□□□□ -0.36
ACTN1-204ENST00000438964 MGAT4DA6NG13 374 aa12.78□□□□□ -0.36
ACTN1-204ENST00000438964 FFAR1O14842 300 aa12.78□□□□□ -0.36
ACTN1-204ENST00000438964 LZTS3O60299 673 aaPredicted RBP12.78□□□□□ -0.36
ACTN1-204ENST00000438964 F11P03951 625 aa12.78□□□□□ -0.36
ACTN1-204ENST00000438964 KLKB1P03952 638 aa12.78□□□□□ -0.36
ACTN1-204ENST00000438964 GLULP15104 373 aa12.78□□□□□ -0.36
ACTN1-204ENST00000438964 BPIP17213 487 aa12.78□□□□□ -0.36
ACTN1-204ENST00000438964 AOAHP28039 575 aa12.78□□□□□ -0.36
ACTN1-204ENST00000438964 RRAS2P62070 204 aaPredicted RBP12.78□□□□□ -0.36
ACTN1-204ENST00000438964 MRPS6P82932 125 aaKnown RBP12.78□□□□□ -0.36
ACTN1-204ENST00000438964 CDC42EP1Q00587 391 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms