RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 ZSCAN32Q9NX65 697 aa6.41□□□□□ -1.38
CSDE1-205ENST00000438362 CCDC59Q9P031 241 aaKnown RBP6.41□□□□□ -1.38
CSDE1-205ENST00000438362 NCKAP1Q9Y2A7 1128 aa6.41□□□□□ -1.38
CSDE1-205ENST00000438362 EXOSC1Q9Y3B2 195 aaKnown RBP6.41□□□□□ -1.38
CSDE1-205ENST00000438362 OR10H1Q9Y4A9 318 aa6.41□□□□□ -1.38
CSDE1-205ENST00000438362 A0A1B0GTL3 188 aa6.4□□□□□ -1.38
CSDE1-205ENST00000438362 CPSF4LA6NMK7 179 aaKnown RBP6.4□□□□□ -1.38
CSDE1-205ENST00000438362 SOBPA7XYQ1 873 aa6.4□□□□□ -1.38
CSDE1-205ENST00000438362 H0YC42 278 aa6.4□□□□□ -1.38
CSDE1-205ENST00000438362 AQP9O43315 295 aa6.4□□□□□ -1.38
CSDE1-205ENST00000438362 GPR37L1O60883 481 aa6.4□□□□□ -1.38
CSDE1-205ENST00000438362 WBP4O75554 376 aaKnown RBP6.4□□□□□ -1.38
CSDE1-205ENST00000438362 APOL3O95236 402 aa6.4□□□□□ -1.38
CSDE1-205ENST00000438362 OXSR1O95747 527 aaPredicted RBP6.4□□□□□ -1.38
CSDE1-205ENST00000438362 TCF3P15923 654 aa6.4□□□□□ -1.38
CSDE1-205ENST00000438362 CPN2P22792 545 aa6.4□□□□□ -1.38
CSDE1-205ENST00000438362 ACSL1P33121 698 aa6.4□□□□□ -1.38
CSDE1-205ENST00000438362 CDKN2CP42773 168 aa6.4□□□□□ -1.38
CSDE1-205ENST00000438362 RGS6P49758 472 aa6.4□□□□□ -1.38
CSDE1-205ENST00000438362 RPS26P62854 115 aaKnown RBP6.4□□□□□ -1.38
CSDE1-205ENST00000438362 PCDH1Q08174 1060 aa6.4□□□□□ -1.38
CSDE1-205ENST00000438362 DEFB115Q30KQ5 88 aa6.4□□□□□ -1.38
CSDE1-205ENST00000438362 ZNF805Q5CZA5 627 aa6.4□□□□□ -1.38
CSDE1-205ENST00000438362 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.4□□□□□ -1.38
CSDE1-205ENST00000438362 SYT6Q5T7P8 510 aaPredicted RBP6.4□□□□□ -1.38
CSDE1-205ENST00000438362 C22orf42Q6IC83 251 aa6.4□□□□□ -1.38
CSDE1-205ENST00000438362 SLC27A4Q6P1M0 643 aa6.4□□□□□ -1.38
CSDE1-205ENST00000438362 GDPGP1Q6ZNW5 385 aa6.4□□□□□ -1.38
CSDE1-205ENST00000438362 LINC00299Q6ZSB3 139 aa6.4□□□□□ -1.38
CSDE1-205ENST00000438362 RNF44Q7L0R7 432 aa6.4□□□□□ -1.38
CSDE1-205ENST00000438362 C6orf120Q7Z4R8 191 aa6.4□□□□□ -1.38
CSDE1-205ENST00000438362 ZNF433Q8N7K0 673 aaPredicted RBP6.4□□□□□ -1.38
CSDE1-205ENST00000438362 OR10G6Q8NH81 332 aa6.4□□□□□ -1.38
CSDE1-205ENST00000438362 SNX33Q8WV41 574 aa6.4□□□□□ -1.38
CSDE1-205ENST00000438362 IRF7Q92985 503 aa6.4□□□□□ -1.38
CSDE1-205ENST00000438362 IFT27Q9BW83 186 aa6.4□□□□□ -1.38
CSDE1-205ENST00000438362 ARHGAP39Q9C0H5 1083 aa6.4□□□□□ -1.38
CSDE1-205ENST00000438362 MRPS30Q9NP92 439 aaKnown RBP6.4□□□□□ -1.38
CSDE1-205ENST00000438362 STOML2Q9UJZ1 356 aa6.4□□□□□ -1.38
CSDE1-205ENST00000438362 STUB1Q9UNE7 303 aa6.4□□□□□ -1.38
CSDE1-205ENST00000438362 WNT6Q9Y6F9 365 aa6.4□□□□□ -1.38
CSDE1-205ENST00000438362 GREB1LQ9C091 1923 aaPredicted RBP6.4□□□□□ -1.38
CSDE1-205ENST00000438362 QSER1Q2KHR3 1735 aa6.4□□□□□ -1.38
CSDE1-205ENST00000438362 ABHD14A-ACY1A0A1B0GW23 586 aa6.4□□□□□ -1.38
CSDE1-205ENST00000438362 FAM172BPA6NC97 362 aa6.4□□□□□ -1.38
CSDE1-205ENST00000438362 GABRR3A8MPY1 467 aa6.4□□□□□ -1.38
CSDE1-205ENST00000438362 RNASET2O00584 256 aaKnown RBP6.4□□□□□ -1.38
CSDE1-205ENST00000438362 KLKB1P03952 638 aa6.4□□□□□ -1.38
CSDE1-205ENST00000438362 SLC35G6P0C7Q6 338 aa6.4□□□□□ -1.38
CSDE1-205ENST00000438362 GSTT2P0CG29 244 aa6.4□□□□□ -1.38
CSDE1-205ENST00000438362 GSTT2BP0CG30 244 aa6.4□□□□□ -1.38
CSDE1-205ENST00000438362 OSMP13725 252 aa6.4□□□□□ -1.38
CSDE1-205ENST00000438362 ATF6P18850 670 aa6.4□□□□□ -1.38
CSDE1-205ENST00000438362 CELP19835 753 aa6.4□□□□□ -1.38
CSDE1-205ENST00000438362 NT5EP21589 574 aa6.4□□□□□ -1.38
CSDE1-205ENST00000438362 AOAHP28039 575 aa6.4□□□□□ -1.38
CSDE1-205ENST00000438362 WASP42768 502 aa6.4□□□□□ -1.38
CSDE1-205ENST00000438362 PSMD4P55036 377 aaKnown RBP6.4□□□□□ -1.38
CSDE1-205ENST00000438362 DCDC1P59894 354 aa6.4□□□□□ -1.38
CSDE1-205ENST00000438362 ADAM15Q13444 863 aa6.4□□□□□ -1.38
CSDE1-205ENST00000438362 DSG2Q14126 1118 aa6.4□□□□□ -1.38
CSDE1-205ENST00000438362 TRAM2Q15035 370 aa6.4□□□□□ -1.38
CSDE1-205ENST00000438362 IER5LQ5T953 404 aa6.4□□□□□ -1.38
CSDE1-205ENST00000438362 AGAP7PQ5VUJ5 663 aa6.4□□□□□ -1.38
CSDE1-205ENST00000438362 PLAG1Q6DJT9 500 aa6.4□□□□□ -1.38
CSDE1-205ENST00000438362 DHRS4L2Q6PKH6 230 aa6.4□□□□□ -1.38
CSDE1-205ENST00000438362 ARL9Q6T311 187 aa6.4□□□□□ -1.38
CSDE1-205ENST00000438362 CEP68Q76N32 757 aa6.4□□□□□ -1.38
CSDE1-205ENST00000438362 OTOP2Q7RTS6 562 aa6.4□□□□□ -1.38
CSDE1-205ENST00000438362 B3GNT7Q8NFL0 401 aa6.4□□□□□ -1.38
CSDE1-205ENST00000438362 HMGCLL1Q8TB92 370 aa6.4□□□□□ -1.38
CSDE1-205ENST00000438362 C16orf78Q8WTQ4 265 aa6.4□□□□□ -1.38
CSDE1-205ENST00000438362 UBTD2Q8WUN7 234 aa6.4□□□□□ -1.38
CSDE1-205ENST00000438362 LRR1Q96L50 414 aa6.4□□□□□ -1.38
CSDE1-205ENST00000438362 WACQ9BTA9 647 aa6.4□□□□□ -1.38
CSDE1-205ENST00000438362 NMNAT1Q9HAN9 279 aaPredicted RBP6.4□□□□□ -1.38
CSDE1-205ENST00000438362 TMEM138Q9NPI0 162 aa6.4□□□□□ -1.38
CSDE1-205ENST00000438362 ELOVL2Q9NXB9 296 aa6.4□□□□□ -1.38
CSDE1-205ENST00000438362 PLAGL1Q9UM63 463 aa6.4□□□□□ -1.38
CSDE1-205ENST00000438362 ASB1Q9Y576 335 aa6.4□□□□□ -1.38
CSDE1-205ENST00000438362 LTBP4Q8N2S1 1624 aa6.4□□□□□ -1.38
CSDE1-205ENST00000438362 SSC5DA1L4H1 1573 aa6.4□□□□□ -1.39
CSDE1-205ENST00000438362 A0A1W2PQ72 361 aa6.4□□□□□ -1.39
CSDE1-205ENST00000438362 H7BY64 318 aa6.4□□□□□ -1.39
CSDE1-205ENST00000438362 M0R129 80 aa6.4□□□□□ -1.39
CSDE1-205ENST00000438362 TAPBPO15533 448 aa6.4□□□□□ -1.39
CSDE1-205ENST00000438362 KLK8O60259 260 aa6.4□□□□□ -1.39
CSDE1-205ENST00000438362 FKTNO75072 461 aa6.4□□□□□ -1.39
CSDE1-205ENST00000438362 ENTPD6O75354 484 aa6.4□□□□□ -1.39
CSDE1-205ENST00000438362 OR6A2O95222 327 aa6.4□□□□□ -1.39
CSDE1-205ENST00000438362 OR12D1P0DN82 309 aa6.4□□□□□ -1.39
CSDE1-205ENST00000438362 ACP5P13686 325 aa6.4□□□□□ -1.39
CSDE1-205ENST00000438362 MAP2K3P46734 347 aa6.4□□□□□ -1.39
CSDE1-205ENST00000438362 HNRNPFP52597 415 aaKnown RBP6.4□□□□□ -1.39
CSDE1-205ENST00000438362 BIKQ13323 160 aa6.4□□□□□ -1.39
CSDE1-205ENST00000438362 ADPRMQ3LIE5 342 aa6.4□□□□□ -1.39
CSDE1-205ENST00000438362 GGTA1PQ4G0N0 100 aa6.4□□□□□ -1.39
CSDE1-205ENST00000438362 EIPR1Q53HC9 387 aa6.4□□□□□ -1.39
CSDE1-205ENST00000438362 NXPE4Q6UWF7 544 aa6.4□□□□□ -1.39
CSDE1-205ENST00000438362 UNC5DQ6UXZ4 953 aa6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms