RNA–Protein interactions for RNA: ENST00000434192.2

GTF2A1-202, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 1 (best) BASIC

Gene GTF2A1, Length 1,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-202ENST00000434192 CSF2RBP32927 897 aa6.56□□□□□ -1.36
GTF2A1-202ENST00000434192 AHRP35869 848 aa6.56□□□□□ -1.36
GTF2A1-202ENST00000434192 GRIA3P42263 894 aa6.56□□□□□ -1.36
GTF2A1-202ENST00000434192 PIK3CBP42338 1070 aa6.56□□□□□ -1.36
GTF2A1-202ENST00000434192 NOVA1P51513 510 aaKnown RBP6.56□□□□□ -1.36
GTF2A1-202ENST00000434192 GFERP55789 205 aa6.56□□□□□ -1.36
GTF2A1-202ENST00000434192 OR1D5P58170 312 aa6.56□□□□□ -1.36
GTF2A1-202ENST00000434192 STX1BP61266 288 aa6.56□□□□□ -1.36
GTF2A1-202ENST00000434192 PPP1CAP62136 330 aa6.56□□□□□ -1.36
GTF2A1-202ENST00000434192 ERVK-8P63133 956 aa6.56□□□□□ -1.36
GTF2A1-202ENST00000434192 RPL38P63173 70 aaKnown RBP6.56□□□□□ -1.36
GTF2A1-202ENST00000434192 CYP4F2P78329 520 aa6.56□□□□□ -1.36
GTF2A1-202ENST00000434192 IRX1P78414 480 aaPredicted RBP6.56□□□□□ -1.36
GTF2A1-202ENST00000434192 HMGCS1Q01581 520 aa6.56□□□□□ -1.36
GTF2A1-202ENST00000434192 MAD2L1Q13257 205 aaPredicted RBP6.56□□□□□ -1.36
GTF2A1-202ENST00000434192 SLC14A1Q13336 389 aa6.56□□□□□ -1.36
GTF2A1-202ENST00000434192 TUBB3Q13509 450 aa6.56□□□□□ -1.36
GTF2A1-202ENST00000434192 SLC9A5Q14940 896 aa6.56□□□□□ -1.36
GTF2A1-202ENST00000434192 LSM12Q3MHD2 195 aaKnown RBP6.56□□□□□ -1.36
GTF2A1-202ENST00000434192 GALNTL6Q49A17 601 aa6.56□□□□□ -1.36
GTF2A1-202ENST00000434192 SPIN4Q56A73 249 aa6.56□□□□□ -1.36
GTF2A1-202ENST00000434192 SPDYAQ5MJ70 313 aa6.56□□□□□ -1.36
GTF2A1-202ENST00000434192 MRM1Q6IN84 353 aaKnown RBP6.56□□□□□ -1.36
GTF2A1-202ENST00000434192 ADNP2Q6IQ32 1131 aa6.56□□□□□ -1.36
GTF2A1-202ENST00000434192 SCIMPQ6UWF3 145 aa6.56□□□□□ -1.36
GTF2A1-202ENST00000434192 FAM92BQ6ZTR7 304 aa6.56□□□□□ -1.36
GTF2A1-202ENST00000434192 RNF44Q7L0R7 432 aa6.56□□□□□ -1.36
GTF2A1-202ENST00000434192 ZNF227Q86WZ6 799 aa6.56□□□□□ -1.36
GTF2A1-202ENST00000434192 PLXDC1Q8IUK5 500 aa6.56□□□□□ -1.36
GTF2A1-202ENST00000434192 NAXDQ8IW45 347 aa6.56□□□□□ -1.36
GTF2A1-202ENST00000434192 Q8N9G6 341 aaPredicted RBP6.56□□□□□ -1.36
GTF2A1-202ENST00000434192 FNDC5Q8NAU1 212 aa6.56□□□□□ -1.36
GTF2A1-202ENST00000434192 ZNF740Q8NDX6 193 aa6.56□□□□□ -1.36
GTF2A1-202ENST00000434192 OR2T11Q8NH01 316 aa6.56□□□□□ -1.36
GTF2A1-202ENST00000434192 NCSTNQ92542 709 aa6.56□□□□□ -1.36
GTF2A1-202ENST00000434192 MTFMTQ96DP5 389 aaKnown RBP6.56□□□□□ -1.36
GTF2A1-202ENST00000434192 CNDP2Q96KP4 475 aaKnown RBP6.56□□□□□ -1.36
GTF2A1-202ENST00000434192 C3orf30Q96M34 536 aa6.56□□□□□ -1.36
GTF2A1-202ENST00000434192 TGM7Q96PF1 710 aa6.56□□□□□ -1.36
GTF2A1-202ENST00000434192 LRRC37BQ96QE4 947 aa6.56□□□□□ -1.36
GTF2A1-202ENST00000434192 MTERF1Q99551 399 aaKnown RBP6.56□□□□□ -1.36
GTF2A1-202ENST00000434192 DPYSL5Q9BPU6 564 aa6.56□□□□□ -1.36
GTF2A1-202ENST00000434192 ZFYVE21Q9BQ24 234 aa6.56□□□□□ -1.36
GTF2A1-202ENST00000434192 CCDC3Q9BQI4 270 aa6.56□□□□□ -1.36
GTF2A1-202ENST00000434192 CENPKQ9BS16 269 aa6.56□□□□□ -1.36
GTF2A1-202ENST00000434192 SARGQ9BW04 601 aa6.56□□□□□ -1.36
GTF2A1-202ENST00000434192 ABCG4Q9H172 646 aa6.56□□□□□ -1.36
GTF2A1-202ENST00000434192 RHBGQ9H310 441 aa6.56□□□□□ -1.36
GTF2A1-202ENST00000434192 WDR55Q9H6Y2 383 aaPredicted RBP6.56□□□□□ -1.36
GTF2A1-202ENST00000434192 LRTM1Q9HBL6 345 aa6.56□□□□□ -1.36
GTF2A1-202ENST00000434192 NMRK1Q9NWW6 199 aa6.56□□□□□ -1.36
GTF2A1-202ENST00000434192 SOHLH2Q9NX45 425 aa6.56□□□□□ -1.36
GTF2A1-202ENST00000434192 HEY2Q9UBP5 337 aa6.56□□□□□ -1.36
GTF2A1-202ENST00000434192 EPHA6Q9UF33 1036 aa6.56□□□□□ -1.36
GTF2A1-202ENST00000434192 TMEFF2Q9UIK5 374 aaPredicted RBP6.56□□□□□ -1.36
GTF2A1-202ENST00000434192 SLC12A4Q9UP95 1085 aa6.56□□□□□ -1.36
GTF2A1-202ENST00000434192 BTBD3Q9Y2F9 522 aa6.56□□□□□ -1.36
GTF2A1-202ENST00000434192 TMED5Q9Y3A6 229 aa6.56□□□□□ -1.36
GTF2A1-202ENST00000434192 POLR3HQ9Y535 204 aaPredicted RBP6.56□□□□□ -1.36
GTF2A1-202ENST00000434192 KLK4Q9Y5K2 254 aa6.56□□□□□ -1.36
GTF2A1-202ENST00000434192 U3KQA8 63 aa6.56□□□□□ -1.36
GTF2A1-202ENST00000434192 NCOR2Q9Y618 2525 aa6.56□□□□□ -1.36
GTF2A1-202ENST00000434192 MAGEB17A8MXT2 336 aa6.55□□□□□ -1.36
GTF2A1-202ENST00000434192 C22orf46C9J442 243 aa6.55□□□□□ -1.36
GTF2A1-202ENST00000434192 NPIPB8E9PQR5 432 aa6.55□□□□□ -1.36
GTF2A1-202ENST00000434192 FOXE1O00358 373 aaPredicted RBP6.55□□□□□ -1.36
GTF2A1-202ENST00000434192 FCHO1O14526 889 aa6.55□□□□□ -1.36
GTF2A1-202ENST00000434192 UBDO15205 165 aa6.55□□□□□ -1.36
GTF2A1-202ENST00000434192 NDUFS4O43181 175 aa6.55□□□□□ -1.36
GTF2A1-202ENST00000434192 TNFSF14O43557 240 aa6.55□□□□□ -1.36
GTF2A1-202ENST00000434192 PEX11AO75192 247 aa6.55□□□□□ -1.36
GTF2A1-202ENST00000434192 SEMA3DO95025 777 aa6.55□□□□□ -1.36
GTF2A1-202ENST00000434192 CPNE6O95741 557 aa6.55□□□□□ -1.36
GTF2A1-202ENST00000434192 LDOC1O95751 146 aaPredicted RBP6.55□□□□□ -1.36
GTF2A1-202ENST00000434192 C9P02748 559 aa6.55□□□□□ -1.36
GTF2A1-202ENST00000434192 RPLP0P05388 317 aaKnown RBP6.55□□□□□ -1.36
GTF2A1-202ENST00000434192 SERPIND1P05546 499 aa6.55□□□□□ -1.36
GTF2A1-202ENST00000434192 SERPINA6P08185 405 aa6.55□□□□□ -1.36
GTF2A1-202ENST00000434192 MYF5P13349 255 aa6.55□□□□□ -1.36
GTF2A1-202ENST00000434192 CEACAM1P13688 526 aa6.55□□□□□ -1.36
GTF2A1-202ENST00000434192 IDO1P14902 403 aa6.55□□□□□ -1.36
GTF2A1-202ENST00000434192 PVRP15151 417 aa6.55□□□□□ -1.36
GTF2A1-202ENST00000434192 ST6GAL1P15907 406 aa6.55□□□□□ -1.36
GTF2A1-202ENST00000434192 NCF2P19878 526 aaPredicted RBP6.55□□□□□ -1.36
GTF2A1-202ENST00000434192 FPR2P25090 351 aa6.55□□□□□ -1.36
GTF2A1-202ENST00000434192 DNAJA1P31689 397 aaKnown RBP6.55□□□□□ -1.36
GTF2A1-202ENST00000434192 BCL6P41182 706 aa6.55□□□□□ -1.36
GTF2A1-202ENST00000434192 BUD31P41223 144 aaPredicted RBP6.55□□□□□ -1.36
GTF2A1-202ENST00000434192 NEK2P51955 445 aa6.55□□□□□ -1.36
GTF2A1-202ENST00000434192 RAP1GDS1P52306 607 aa6.55□□□□□ -1.36
GTF2A1-202ENST00000434192 SLURP1P55000 103 aa6.55□□□□□ -1.36
GTF2A1-202ENST00000434192 RPS13P62277 151 aaKnown RBP6.55□□□□□ -1.36
GTF2A1-202ENST00000434192 RELAQ04206 551 aa6.55□□□□□ -1.36
GTF2A1-202ENST00000434192 RGS1Q08116 209 aa6.55□□□□□ -1.36
GTF2A1-202ENST00000434192 CUL3Q13618 768 aa6.55□□□□□ -1.36
GTF2A1-202ENST00000434192 SQLEQ14534 574 aa6.55□□□□□ -1.36
GTF2A1-202ENST00000434192 FXNQ16595 210 aa6.55□□□□□ -1.36
GTF2A1-202ENST00000434192 CLPPQ16740 277 aaPredicted RBP6.55□□□□□ -1.36
GTF2A1-202ENST00000434192 PRSS53Q2L4Q9 553 aa6.55□□□□□ -1.36
GTF2A1-202ENST00000434192 SMU1Q2TAY7 513 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms