RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 C9orf43Q8TAL5 461 aaPredicted RBP14.6□□□□□ -0.07
TREX1-201ENST00000433541 ARL8AQ96BM9 186 aa14.6□□□□□ -0.07
TREX1-201ENST00000433541 ATP6V1G3Q96LB4 118 aa14.6□□□□□ -0.07
TREX1-201ENST00000433541 MESP1Q9BRJ9 268 aa14.6□□□□□ -0.07
TREX1-201ENST00000433541 SLC25A23Q9BV35 468 aa14.6□□□□□ -0.07
TREX1-201ENST00000433541 VIPAS39Q9H9C1 493 aa14.6□□□□□ -0.07
TREX1-201ENST00000433541 RALYQ9UKM9 306 aaKnown RBP14.6□□□□□ -0.07
TREX1-201ENST00000433541 MMACHCQ9Y4U1 282 aa14.6□□□□□ -0.07
TREX1-201ENST00000433541 PCSK5Q92824 1860 aa14.6□□□□□ -0.07
TREX1-201ENST00000433541 ATMQ13315 3056 aa14.6□□□□□ -0.07
TREX1-201ENST00000433541 CACNA1GO43497 2377 aa14.59□□□□□ -0.07
TREX1-201ENST00000433541 FAM208BQ5VWN6 2430 aa14.59□□□□□ -0.07
TREX1-201ENST00000433541 IGHV1-45A0A0A0MS14 117 aa14.59□□□□□ -0.07
TREX1-201ENST00000433541 GNG14A0A1W2PPG7 69 aa14.59□□□□□ -0.07
TREX1-201ENST00000433541 A8MUA0 341 aa14.59□□□□□ -0.07
TREX1-201ENST00000433541 IFNA16P05015 189 aa14.59□□□□□ -0.07
TREX1-201ENST00000433541 SERPINE1P05121 402 aa14.59□□□□□ -0.07
TREX1-201ENST00000433541 FAM58BPP0C7Q3 252 aa14.59□□□□□ -0.07
TREX1-201ENST00000433541 NR2F6P10588 404 aa14.59□□□□□ -0.07
TREX1-201ENST00000433541 SFTPCP11686 197 aa14.59□□□□□ -0.07
TREX1-201ENST00000433541 BSGP35613 385 aa14.59□□□□□ -0.07
TREX1-201ENST00000433541 ZNF33BQ06732 778 aa14.59□□□□□ -0.07
TREX1-201ENST00000433541 BTBD16Q32M84 506 aa14.59□□□□□ -0.07
TREX1-201ENST00000433541 METTL4Q8N3J2 472 aa14.59□□□□□ -0.07
TREX1-201ENST00000433541 ZCCHC7Q8N3Z6 543 aaKnown RBP14.59□□□□□ -0.07
TREX1-201ENST00000433541 GALNT16Q8N428 558 aa14.59□□□□□ -0.07
TREX1-201ENST00000433541 CDC26Q8NHZ8 85 aa14.59□□□□□ -0.07
TREX1-201ENST00000433541 TLCD1Q96CP7 247 aa14.59□□□□□ -0.07
TREX1-201ENST00000433541 THOC3Q96J01 351 aaKnown RBP14.59□□□□□ -0.07
TREX1-201ENST00000433541 LPAR4Q99677 370 aa14.59□□□□□ -0.07
TREX1-201ENST00000433541 ACPTQ9BZG2 426 aa14.59□□□□□ -0.07
TREX1-201ENST00000433541 ADNPQ9H2P0 1102 aa14.59□□□□□ -0.07
TREX1-201ENST00000433541 DDX31Q9H8H2 851 aaKnown RBP14.59□□□□□ -0.07
TREX1-201ENST00000433541 NECTIN3Q9NQS3 549 aa14.59□□□□□ -0.07
TREX1-201ENST00000433541 PNO1Q9NRX1 252 aaKnown RBP14.59□□□□□ -0.07
TREX1-201ENST00000433541 GPR83Q9NYM4 423 aa14.59□□□□□ -0.07
TREX1-201ENST00000433541 A0A0A6YYD5 115 aa14.58□□□□□ -0.08
TREX1-201ENST00000433541 BLACEA4D250 179 aa14.58□□□□□ -0.08
TREX1-201ENST00000433541 ATXN7O15265 892 aaPredicted RBP14.58□□□□□ -0.08
TREX1-201ENST00000433541 TMPRSS11DO60235 418 aa14.58□□□□□ -0.08
TREX1-201ENST00000433541 LDB3O75112 727 aa14.58□□□□□ -0.08
TREX1-201ENST00000433541 GUCY1B2O75343 617 aa14.58□□□□□ -0.08
TREX1-201ENST00000433541 SCELO95171 688 aa14.58□□□□□ -0.08
TREX1-201ENST00000433541 COX6A1P12074 109 aa14.58□□□□□ -0.08
TREX1-201ENST00000433541 CHN1P15882 459 aa14.58□□□□□ -0.08
TREX1-201ENST00000433541 BGNP21810 368 aa14.58□□□□□ -0.08
TREX1-201ENST00000433541 PGDP52209 483 aa14.58□□□□□ -0.08
TREX1-201ENST00000433541 HNRNPFP52597 415 aaKnown RBP14.58□□□□□ -0.08
TREX1-201ENST00000433541 HNRNPH2P55795 449 aaKnown RBP14.58□□□□□ -0.08
TREX1-201ENST00000433541 HSD17B7P56937 341 aa14.58□□□□□ -0.08
TREX1-201ENST00000433541 TNFRSF17Q02223 184 aa14.58□□□□□ -0.08
TREX1-201ENST00000433541 MPP2Q14168 576 aa14.58□□□□□ -0.08
TREX1-201ENST00000433541 SPIN4Q56A73 249 aa14.58□□□□□ -0.08
TREX1-201ENST00000433541 PAPD4Q6PIY7 484 aaKnown RBP14.58□□□□□ -0.08
TREX1-201ENST00000433541 TMEM205Q6UW68 189 aa14.58□□□□□ -0.08
TREX1-201ENST00000433541 KBTBD2Q8IY47 623 aa14.58□□□□□ -0.08
TREX1-201ENST00000433541 PLPP5Q8NEB5 264 aa14.58□□□□□ -0.08
TREX1-201ENST00000433541 TUBB6Q9BUF5 446 aa14.58□□□□□ -0.08
TREX1-201ENST00000433541 ZNF700Q9H0M5 742 aa14.58□□□□□ -0.08
TREX1-201ENST00000433541 RPF2Q9H7B2 306 aaKnown RBP14.58□□□□□ -0.08
TREX1-201ENST00000433541 TNFRSF12AQ9NP84 129 aa14.58□□□□□ -0.08
TREX1-201ENST00000433541 ZNF71Q9NQZ8 489 aaPredicted RBP14.58□□□□□ -0.08
TREX1-201ENST00000433541 ZFYVE26Q68DK2 2539 aa14.58□□□□□ -0.08
TREX1-201ENST00000433541 LOC102723996A0A087X1L8 192 aa14.57□□□□□ -0.08
TREX1-201ENST00000433541 MYOCOSA0A1B0GUC4 107 aa14.57□□□□□ -0.08
TREX1-201ENST00000433541 GLOD5A6NK44 160 aa14.57□□□□□ -0.08
TREX1-201ENST00000433541 TMEM114B3SHH9 223 aa14.57□□□□□ -0.08
TREX1-201ENST00000433541 TMEM233B4DJY2 109 aa14.57□□□□□ -0.08
TREX1-201ENST00000433541 SLC28A1O00337 649 aa14.57□□□□□ -0.08
TREX1-201ENST00000433541 CYR61O00622 381 aa14.57□□□□□ -0.08
TREX1-201ENST00000433541 RGS14O43566 566 aa14.57□□□□□ -0.08
TREX1-201ENST00000433541 PCDH7O60245 1069 aa14.57□□□□□ -0.08
TREX1-201ENST00000433541 SKAP2O75563 359 aaPredicted RBP14.57□□□□□ -0.08
TREX1-201ENST00000433541 LYPLA1O75608 230 aaPredicted RBP14.57□□□□□ -0.08
TREX1-201ENST00000433541 MYO1DO94832 1006 aa14.57□□□□□ -0.08
TREX1-201ENST00000433541 ALPPP05187 535 aa14.57□□□□□ -0.08
TREX1-201ENST00000433541 ICAM2P13598 275 aa14.57□□□□□ -0.08
TREX1-201ENST00000433541 TNNI3P19429 210 aa14.57□□□□□ -0.08
TREX1-201ENST00000433541 GRK2P25098 689 aa14.57□□□□□ -0.08
TREX1-201ENST00000433541 PPP2R1BP30154 601 aa14.57□□□□□ -0.08
TREX1-201ENST00000433541 ALDH9A1P49189 494 aa14.57□□□□□ -0.08
TREX1-201ENST00000433541 EFNA3P52797 238 aa14.57□□□□□ -0.08
TREX1-201ENST00000433541 ABCE1P61221 599 aaKnown RBP14.57□□□□□ -0.08
TREX1-201ENST00000433541 AP2B1P63010 937 aa14.57□□□□□ -0.08
TREX1-201ENST00000433541 ID2Q02363 134 aa14.57□□□□□ -0.08
TREX1-201ENST00000433541 STX3Q13277 289 aa14.57□□□□□ -0.08
TREX1-201ENST00000433541 PCOLCEQ15113 449 aa14.57□□□□□ -0.08
TREX1-201ENST00000433541 NR6A1Q15406 480 aa14.57□□□□□ -0.08
TREX1-201ENST00000433541 C18orf63Q68DL7 685 aa14.57□□□□□ -0.08
TREX1-201ENST00000433541 HOMEZQ8IX15 550 aa14.57□□□□□ -0.08
TREX1-201ENST00000433541 CLYBLQ8N0X4 340 aa14.57□□□□□ -0.08
TREX1-201ENST00000433541 TMEM52Q8NDY8 209 aa14.57□□□□□ -0.08
TREX1-201ENST00000433541 TWIST2Q8WVJ9 160 aa14.57□□□□□ -0.08
TREX1-201ENST00000433541 DYDC1Q8WWB3 177 aa14.57□□□□□ -0.08
TREX1-201ENST00000433541 SLC39A7Q92504 469 aa14.57□□□□□ -0.08
TREX1-201ENST00000433541 ABHD17AQ96GS6 310 aa14.57□□□□□ -0.08
TREX1-201ENST00000433541 EBPLQ9BY08 206 aa14.57□□□□□ -0.08
TREX1-201ENST00000433541 ZNF717Q9BY31 904 aaPredicted RBP14.57□□□□□ -0.08
TREX1-201ENST00000433541 KCMF1Q9P0J7 381 aa14.57□□□□□ -0.08
TREX1-201ENST00000433541 ADAM29Q9UKF5 820 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms