RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 NR0B1P51843 470 aaKnown RBP2.7□□□□□ -1.98
HMGB1P27-201ENST00000431429 HNRNPFP52597 415 aaKnown RBP2.7□□□□□ -1.98
HMGB1P27-201ENST00000431429 BACE1P56817 501 aa2.7□□□□□ -1.98
HMGB1P27-201ENST00000431429 SRP54P61011 504 aaKnown RBP2.7□□□□□ -1.98
HMGB1P27-201ENST00000431429 KCNJ10P78508 379 aa2.7□□□□□ -1.98
HMGB1P27-201ENST00000431429 HSPA14Q0VDF9 509 aa2.7□□□□□ -1.98
HMGB1P27-201ENST00000431429 WASHC5Q12768 1159 aa2.7□□□□□ -1.98
HMGB1P27-201ENST00000431429 RIGQ13278 110 aa2.7□□□□□ -1.98
HMGB1P27-201ENST00000431429 MTF1Q14872 753 aa2.7□□□□□ -1.98
HMGB1P27-201ENST00000431429 TRIM65Q6PJ69 517 aa2.7□□□□□ -1.98
HMGB1P27-201ENST00000431429 TOM1L2Q6ZVM7 507 aa2.7□□□□□ -1.98
HMGB1P27-201ENST00000431429 Q6ZVQ6 151 aa2.7□□□□□ -1.98
HMGB1P27-201ENST00000431429 CUZD1Q86UP6 607 aa2.7□□□□□ -1.98
HMGB1P27-201ENST00000431429 C17orf64Q86WR6 236 aa2.7□□□□□ -1.98
HMGB1P27-201ENST00000431429 CACUL1Q86Y37 369 aa2.7□□□□□ -1.98
HMGB1P27-201ENST00000431429 BATF2Q8N1L9 274 aa2.7□□□□□ -1.98
HMGB1P27-201ENST00000431429 SLC43A2Q8N370 569 aa2.7□□□□□ -1.98
HMGB1P27-201ENST00000431429 TCEANCQ8N8B7 351 aa2.7□□□□□ -1.98
HMGB1P27-201ENST00000431429 TMEM178AQ8NBL3 297 aa2.7□□□□□ -1.98
HMGB1P27-201ENST00000431429 GPRC5AQ8NFJ5 357 aa2.7□□□□□ -1.98
HMGB1P27-201ENST00000431429 OR5T2Q8NGG2 359 aa2.7□□□□□ -1.98
HMGB1P27-201ENST00000431429 CHURC1Q8WUH1 139 aa2.7□□□□□ -1.98
HMGB1P27-201ENST00000431429 SMPDL3AQ92484 453 aa2.7□□□□□ -1.98
HMGB1P27-201ENST00000431429 C11orf52Q96A22 123 aa2.7□□□□□ -1.98
HMGB1P27-201ENST00000431429 MRPL53Q96EL3 112 aaKnown RBP2.7□□□□□ -1.98
HMGB1P27-201ENST00000431429 C14orf79Q96F83 325 aa2.7□□□□□ -1.98
HMGB1P27-201ENST00000431429 GMPPAQ96IJ6 420 aaPredicted RBP2.7□□□□□ -1.98
HMGB1P27-201ENST00000431429 SAMD8Q96LT4 415 aa2.7□□□□□ -1.98
HMGB1P27-201ENST00000431429 NECTIN4Q96NY8 510 aa2.7□□□□□ -1.98
HMGB1P27-201ENST00000431429 FAM111AQ96PZ2 611 aa2.7□□□□□ -1.98
HMGB1P27-201ENST00000431429 KCNK16Q96T55 309 aa2.7□□□□□ -1.98
HMGB1P27-201ENST00000431429 KRT12Q99456 494 aa2.7□□□□□ -1.98
HMGB1P27-201ENST00000431429 IL12RB2Q99665 862 aa2.7□□□□□ -1.98
HMGB1P27-201ENST00000431429 SPAG8Q99932 426 aaPredicted RBP2.7□□□□□ -1.98
HMGB1P27-201ENST00000431429 PAPOLGQ9BWT3 736 aaKnown RBP2.7□□□□□ -1.98
HMGB1P27-201ENST00000431429 XPO4Q9C0E2 1151 aaKnown RBP2.7□□□□□ -1.98
HMGB1P27-201ENST00000431429 HOXD1Q9GZZ0 328 aa2.7□□□□□ -1.98
HMGB1P27-201ENST00000431429 TRPV6Q9H1D0 765 aa2.7□□□□□ -1.98
HMGB1P27-201ENST00000431429 ZNF665Q9H7R5 613 aa2.7□□□□□ -1.98
HMGB1P27-201ENST00000431429 DDX28Q9NUL7 540 aaKnown RBP2.7□□□□□ -1.98
HMGB1P27-201ENST00000431429 POMT2Q9UKY4 750 aa2.7□□□□□ -1.98
HMGB1P27-201ENST00000431429 CCPG1Q9ULG6 757 aa2.7□□□□□ -1.98
HMGB1P27-201ENST00000431429 NCKAP1Q9Y2A7 1128 aa2.7□□□□□ -1.98
HMGB1P27-201ENST00000431429 WDR37Q9Y2I8 494 aa2.7□□□□□ -1.98
HMGB1P27-201ENST00000431429 ANGPTL3Q9Y5C1 460 aa2.7□□□□□ -1.98
HMGB1P27-201ENST00000431429 SELENOKQ9Y6D0 94 aa2.7□□□□□ -1.98
HMGB1P27-201ENST00000431429 TCF20Q9UGU0 1960 aaKnown RBP2.7□□□□□ -1.98
HMGB1P27-201ENST00000431429 MLH3Q9UHC1 1453 aa2.7□□□□□ -1.98
HMGB1P27-201ENST00000431429 FGD6Q6ZV73 1430 aa2.69□□□□□ -1.98
HMGB1P27-201ENST00000431429 LRRC7Q96NW7 1537 aa2.69□□□□□ -1.98
HMGB1P27-201ENST00000431429 KDM5DQ9BY66 1539 aa2.69□□□□□ -1.98
HMGB1P27-201ENST00000431429 FAM135AQ9P2D6 1515 aa2.69□□□□□ -1.98
HMGB1P27-201ENST00000431429 HECW1Q76N89 1606 aa2.69□□□□□ -1.98
HMGB1P27-201ENST00000431429 hCG_38984A0A1B0GV85 526 aa2.69□□□□□ -1.98
HMGB1P27-201ENST00000431429 SYCE3A1L190 88 aa2.69□□□□□ -1.98
HMGB1P27-201ENST00000431429 CFAP73A6NFT4 308 aa2.69□□□□□ -1.98
HMGB1P27-201ENST00000431429 IFITM10A6NMD0 228 aa2.69□□□□□ -1.98
HMGB1P27-201ENST00000431429 G3V2L1 256 aa2.69□□□□□ -1.98
HMGB1P27-201ENST00000431429 CCSO14618 274 aa2.69□□□□□ -1.98
HMGB1P27-201ENST00000431429 ARPC1BO15143 372 aaKnown RBP2.69□□□□□ -1.98
HMGB1P27-201ENST00000431429 NME2P1O60361 137 aa2.69□□□□□ -1.98
HMGB1P27-201ENST00000431429 CAVIN2O95810 425 aa2.69□□□□□ -1.98
HMGB1P27-201ENST00000431429 PDGFBP01127 241 aaPredicted RBP2.69□□□□□ -1.98
HMGB1P27-201ENST00000431429 CFC1BP0CG36 223 aa2.69□□□□□ -1.98
HMGB1P27-201ENST00000431429 CFC1P0CG37 223 aa2.69□□□□□ -1.98
HMGB1P27-201ENST00000431429 ETS1P14921 441 aa2.69□□□□□ -1.98
HMGB1P27-201ENST00000431429 CPA3P15088 417 aa2.69□□□□□ -1.98
HMGB1P27-201ENST00000431429 CTNNA2P26232 953 aa2.69□□□□□ -1.98
HMGB1P27-201ENST00000431429 CHRNB4P30926 498 aa2.69□□□□□ -1.98
HMGB1P27-201ENST00000431429 SLC1A3P43003 542 aa2.69□□□□□ -1.98
HMGB1P27-201ENST00000431429 PAX9P55771 341 aa2.69□□□□□ -1.98
HMGB1P27-201ENST00000431429 EVCP57679 992 aa2.69□□□□□ -1.98
HMGB1P27-201ENST00000431429 C1QTNF8P60827 252 aa2.69□□□□□ -1.98
HMGB1P27-201ENST00000431429 BTG1P62324 171 aa2.69□□□□□ -1.98
HMGB1P27-201ENST00000431429 HTD2P86397 168 aa2.69□□□□□ -1.98
HMGB1P27-201ENST00000431429 CCZ1BP86790 482 aa2.69□□□□□ -1.98
HMGB1P27-201ENST00000431429 CCZ1P86791 482 aaPredicted RBP2.69□□□□□ -1.98
HMGB1P27-201ENST00000431429 ZNF528Q3MIS6 628 aa2.69□□□□□ -1.98
HMGB1P27-201ENST00000431429 ZNF876PQ49A33 203 aa2.69□□□□□ -1.98
HMGB1P27-201ENST00000431429 TTC31Q49AM3 519 aaPredicted RBP2.69□□□□□ -1.98
HMGB1P27-201ENST00000431429 FGD3Q5JSP0 725 aa2.69□□□□□ -1.98
HMGB1P27-201ENST00000431429 FFAR4Q5NUL3 377 aa2.69□□□□□ -1.98
HMGB1P27-201ENST00000431429 C12orf60Q5U649 245 aa2.69□□□□□ -1.98
HMGB1P27-201ENST00000431429 NKAIN2Q5VXU1 208 aa2.69□□□□□ -1.98
HMGB1P27-201ENST00000431429 CAPN13Q6MZZ7 669 aaPredicted RBP2.69□□□□□ -1.98
HMGB1P27-201ENST00000431429 Q6ZSR9 355 aa2.69□□□□□ -1.98
HMGB1P27-201ENST00000431429 PTAR1Q7Z6K3 402 aaPredicted RBP2.69□□□□□ -1.98
HMGB1P27-201ENST00000431429 SLC22A16Q86VW1 577 aa2.69□□□□□ -1.98
HMGB1P27-201ENST00000431429 KLHDC8BQ8IXV7 354 aa2.69□□□□□ -1.98
HMGB1P27-201ENST00000431429 KDM8Q8N371 416 aa2.69□□□□□ -1.98
HMGB1P27-201ENST00000431429 TEX9Q8N6V9 391 aa2.69□□□□□ -1.98
HMGB1P27-201ENST00000431429 CNBD1Q8NA66 436 aa2.69□□□□□ -1.98
HMGB1P27-201ENST00000431429 MINDY2Q8NBR6 621 aa2.69□□□□□ -1.98
HMGB1P27-201ENST00000431429 OR4D10Q8NGI6 311 aa2.69□□□□□ -1.98
HMGB1P27-201ENST00000431429 OR13C5Q8NGS8 318 aa2.69□□□□□ -1.98
HMGB1P27-201ENST00000431429 OR4L1Q8NH43 312 aa2.69□□□□□ -1.98
HMGB1P27-201ENST00000431429 MAPK15Q8TD08 544 aa2.69□□□□□ -1.98
HMGB1P27-201ENST00000431429 RSPH1Q8WYR4 309 aa2.69□□□□□ -1.98
HMGB1P27-201ENST00000431429 PRCCQ92733 491 aaPredicted RBP2.69□□□□□ -1.98
HMGB1P27-201ENST00000431429 ESAMQ96AP7 390 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms