RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 MC1RQ01726 317 aa16.35■□□□□ 0.21
SMARCA4-203ENST00000429416 ABHD18Q0P651 414 aa16.35■□□□□ 0.21
SMARCA4-203ENST00000429416 RPE65Q16518 533 aa16.35■□□□□ 0.21
SMARCA4-203ENST00000429416 LARP4Q71RC2 724 aaKnown RBP eCLIP16.35■□□□□ 0.21
SMARCA4-203ENST00000429416 OR10G2Q8NGC3 310 aa16.35■□□□□ 0.21
SMARCA4-203ENST00000429416 WDR77Q9BQA1 342 aaPredicted RBP16.35■□□□□ 0.21
SMARCA4-203ENST00000429416 HDAC8Q9BY41 377 aa16.35■□□□□ 0.21
SMARCA4-203ENST00000429416 CCNB1IP1Q9NPC3 277 aa16.35■□□□□ 0.21
SMARCA4-203ENST00000429416 C11orf98E9PRG8 122 aa16.35■□□□□ 0.21
SMARCA4-203ENST00000429416 BCKDHAP12694 445 aa16.35■□□□□ 0.21
SMARCA4-203ENST00000429416 ZNF140P52738 457 aaPredicted RBP16.35■□□□□ 0.21
SMARCA4-203ENST00000429416 CCNIQ14094 377 aa16.35■□□□□ 0.21
SMARCA4-203ENST00000429416 MAPK11Q15759 364 aa16.35■□□□□ 0.21
SMARCA4-203ENST00000429416 ZCCHC7Q8N3Z6 543 aaKnown RBP16.35■□□□□ 0.21
SMARCA4-203ENST00000429416 MCHR1Q99705 422 aa16.35■□□□□ 0.21
SMARCA4-203ENST00000429416 POT1Q9NUX5 634 aa16.35■□□□□ 0.21
SMARCA4-203ENST00000429416 ENO4A6NNW6 628 aa16.35■□□□□ 0.21
SMARCA4-203ENST00000429416 E7ESA3 106 aa16.35■□□□□ 0.21
SMARCA4-203ENST00000429416 SCRG1O75711 98 aa16.35■□□□□ 0.21
SMARCA4-203ENST00000429416 MRPL58Q14197 206 aaKnown RBP16.35■□□□□ 0.21
SMARCA4-203ENST00000429416 REEP3Q6NUK4 255 aa16.35■□□□□ 0.21
SMARCA4-203ENST00000429416 LGI4Q8N135 537 aa16.35■□□□□ 0.21
SMARCA4-203ENST00000429416 TSPAN14Q8NG11 270 aa16.35■□□□□ 0.21
SMARCA4-203ENST00000429416 C10orf82Q8WW14 230 aa16.35■□□□□ 0.21
SMARCA4-203ENST00000429416 AURKBQ96GD4 344 aaPredicted RBP16.35■□□□□ 0.21
SMARCA4-203ENST00000429416 CENPNQ96H22 339 aaPredicted RBP16.35■□□□□ 0.21
SMARCA4-203ENST00000429416 S100A14Q9HCY8 104 aa16.35■□□□□ 0.21
SMARCA4-203ENST00000429416 A0A1W2PP18 115 aa16.35■□□□□ 0.21
SMARCA4-203ENST00000429416 EIF3FO00303 357 aaPredicted RBP16.35■□□□□ 0.21
SMARCA4-203ENST00000429416 CCR7P32248 378 aa16.35■□□□□ 0.21
SMARCA4-203ENST00000429416 RPS3AP61247 264 aaKnown RBP16.35■□□□□ 0.21
SMARCA4-203ENST00000429416 RPS26P62854 115 aaKnown RBP16.35■□□□□ 0.21
SMARCA4-203ENST00000429416 PPP1R8Q12972 351 aaKnown RBP16.35■□□□□ 0.21
SMARCA4-203ENST00000429416 CAMK1Q14012 370 aa16.35■□□□□ 0.21
SMARCA4-203ENST00000429416 NDUFAF5Q5TEU4 345 aa16.35■□□□□ 0.21
SMARCA4-203ENST00000429416 SLC5A8Q8N695 610 aa16.35■□□□□ 0.21
SMARCA4-203ENST00000429416 INSM2Q96T92 566 aaPredicted RBP16.35■□□□□ 0.21
SMARCA4-203ENST00000429416 ABCA3Q99758 1704 aa16.35■□□□□ 0.21
SMARCA4-203ENST00000429416 PAIP2BQ9ULR5 123 aaKnown RBP16.35■□□□□ 0.21
SMARCA4-203ENST00000429416 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.35■□□□□ 0.21
SMARCA4-203ENST00000429416 AKAP11Q9UKA4 1901 aa16.35■□□□□ 0.21
SMARCA4-203ENST00000429416 EIF1AYO14602 144 aaKnown RBP16.34■□□□□ 0.21
SMARCA4-203ENST00000429416 PGRMC2O15173 223 aa16.34■□□□□ 0.21
SMARCA4-203ENST00000429416 NUAK1O60285 661 aa16.34■□□□□ 0.21
SMARCA4-203ENST00000429416 DRD2P14416 443 aa16.34■□□□□ 0.21
SMARCA4-203ENST00000429416 NDUFV2P19404 249 aa16.34■□□□□ 0.21
SMARCA4-203ENST00000429416 NR0B1P51843 470 aaKnown RBP16.34■□□□□ 0.21
SMARCA4-203ENST00000429416 OR2B6P58173 313 aa16.34■□□□□ 0.21
SMARCA4-203ENST00000429416 SELENOVP59797 346 aa16.34■□□□□ 0.21
SMARCA4-203ENST00000429416 PDK3Q15120 406 aa16.34■□□□□ 0.21
SMARCA4-203ENST00000429416 ZNF100Q8IYN0 542 aa16.34■□□□□ 0.21
SMARCA4-203ENST00000429416 DDHD1Q8NEL9 900 aa16.34■□□□□ 0.21
SMARCA4-203ENST00000429416 RTP4Q96DX8 246 aa16.34■□□□□ 0.21
SMARCA4-203ENST00000429416 LOC285095A0A1B0GVY8 99 aa16.34■□□□□ 0.21
SMARCA4-203ENST00000429416 CASKO14936 926 aa16.34■□□□□ 0.21
SMARCA4-203ENST00000429416 CH25HO95992 272 aa16.34■□□□□ 0.21
SMARCA4-203ENST00000429416 PSMB5P28074 263 aa16.34■□□□□ 0.21
SMARCA4-203ENST00000429416 RPS9P46781 194 aaKnown RBP16.34■□□□□ 0.21
SMARCA4-203ENST00000429416 PCYT1AP49585 367 aa16.34■□□□□ 0.21
SMARCA4-203ENST00000429416 EEFSECP57772 596 aaKnown RBP16.34■□□□□ 0.21
SMARCA4-203ENST00000429416 CARTPTQ16568 116 aa16.34■□□□□ 0.21
SMARCA4-203ENST00000429416 WDR60Q8WVS4 1066 aa16.34■□□□□ 0.21
SMARCA4-203ENST00000429416 RBP7Q96R05 134 aa16.34■□□□□ 0.21
SMARCA4-203ENST00000429416 COMMD4Q9H0A8 199 aa16.34■□□□□ 0.21
SMARCA4-203ENST00000429416 TPK1Q9H3S4 243 aa16.34■□□□□ 0.21
SMARCA4-203ENST00000429416 SLC22A2O15244 555 aa16.34■□□□□ 0.21
SMARCA4-203ENST00000429416 RBMXL2O75526 392 aaKnown RBP16.34■□□□□ 0.21
SMARCA4-203ENST00000429416 TCEAL6Q6IPX3 200 aa16.34■□□□□ 0.21
SMARCA4-203ENST00000429416 TM9SF4Q92544 642 aa16.34■□□□□ 0.21
SMARCA4-203ENST00000429416 ZFRQ96KR1 1074 aaKnown RBP16.34■□□□□ 0.21
SMARCA4-203ENST00000429416 DIRAS1O95057 198 aa16.34■□□□□ 0.21
SMARCA4-203ENST00000429416 IFI30P13284 250 aa16.34■□□□□ 0.21
SMARCA4-203ENST00000429416 ZNF3P17036 446 aa16.34■□□□□ 0.21
SMARCA4-203ENST00000429416 OR1D4P47884 311 aa16.34■□□□□ 0.21
SMARCA4-203ENST00000429416 FOLH1Q04609 750 aa16.34■□□□□ 0.21
SMARCA4-203ENST00000429416 PMS2P3Q13401 168 aa16.34■□□□□ 0.21
SMARCA4-203ENST00000429416 PDCD4Q53EL6 469 aaKnown RBP16.34■□□□□ 0.21
SMARCA4-203ENST00000429416 AHSA2Q719I0 299 aa16.34■□□□□ 0.21
SMARCA4-203ENST00000429416 ZNF550Q7Z398 422 aa16.34■□□□□ 0.21
SMARCA4-203ENST00000429416 SPEM1Q8N4L4 309 aa16.34■□□□□ 0.21
SMARCA4-203ENST00000429416 SNIP1Q8TAD8 396 aaKnown RBP16.34■□□□□ 0.21
SMARCA4-203ENST00000429416 OR6C1Q96RD1 312 aa16.34■□□□□ 0.21
SMARCA4-203ENST00000429416 PELI2Q9HAT8 420 aa16.34■□□□□ 0.21
SMARCA4-203ENST00000429416 ZNF304Q9HCX3 659 aa16.34■□□□□ 0.21
SMARCA4-203ENST00000429416 CHST10O43529 356 aa16.34■□□□□ 0.21
SMARCA4-203ENST00000429416 INMTO95050 263 aa16.34■□□□□ 0.21
SMARCA4-203ENST00000429416 MERTKQ12866 999 aa16.34■□□□□ 0.21
SMARCA4-203ENST00000429416 RABL3Q5HYI8 236 aa16.34■□□□□ 0.21
SMARCA4-203ENST00000429416 HSDL2Q6YN16 418 aa16.34■□□□□ 0.21
SMARCA4-203ENST00000429416 ZFAND4Q86XD8 727 aa16.34■□□□□ 0.21
SMARCA4-203ENST00000429416 CTRCQ99895 268 aa16.34■□□□□ 0.21
SMARCA4-203ENST00000429416 LTB4R2Q9NPC1 389 aa16.34■□□□□ 0.21
SMARCA4-203ENST00000429416 RHCGQ9UBD6 479 aa16.34■□□□□ 0.21
SMARCA4-203ENST00000429416 AP1M2Q9Y6Q5 423 aa16.34■□□□□ 0.21
SMARCA4-203ENST00000429416 C17orf105B2RV13 164 aa16.33■□□□□ 0.21
SMARCA4-203ENST00000429416 CHN2P52757 468 aa16.33■□□□□ 0.21
SMARCA4-203ENST00000429416 FOXK1P85037 733 aa16.33■□□□□ 0.21
SMARCA4-203ENST00000429416 SPATC1Q76KD6 591 aa16.33■□□□□ 0.21
SMARCA4-203ENST00000429416 A0A1B0GUL6 1792 aa16.33■□□□□ 0.21
SMARCA4-203ENST00000429416 UBR3Q6ZT12 1888 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms