RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 TTYH2Q9BSA4 534 aa15.33■□□□□ 0.04
VARS-216ENST00000428445 TMEM79Q9BSE2 394 aa15.33■□□□□ 0.04
VARS-216ENST00000428445 LIME1Q9H400 295 aa15.33■□□□□ 0.04
VARS-216ENST00000428445 CAB39LQ9H9S4 337 aa15.33■□□□□ 0.04
VARS-216ENST00000428445 PRDM7Q9NQW5 492 aa15.33■□□□□ 0.04
VARS-216ENST00000428445 ALKBH4Q9NXW9 302 aa15.33■□□□□ 0.04
VARS-216ENST00000428445 SNX12Q9UMY4 172 aa15.33■□□□□ 0.04
VARS-216ENST00000428445 DAPP1Q9UN19 280 aa15.33■□□□□ 0.04
VARS-216ENST00000428445 FAM215AQ9Y5M1 114 aa15.33■□□□□ 0.04
VARS-216ENST00000428445 CLCA3PQ9Y6N3 262 aa15.33■□□□□ 0.04
VARS-216ENST00000428445 ITPR3Q14573 2671 aa15.33■□□□□ 0.04
VARS-216ENST00000428445 NINQ8N4C6 2090 aa15.32■□□□□ 0.04
VARS-216ENST00000428445 FREM3P0C091 2139 aa15.32■□□□□ 0.04
VARS-216ENST00000428445 A0A0G2JNJ9 132 aa15.32■□□□□ 0.04
VARS-216ENST00000428445 ANKDD1BA6NHY2 528 aa15.32■□□□□ 0.04
VARS-216ENST00000428445 RTCAO00442 366 aaKnown RBP15.32■□□□□ 0.04
VARS-216ENST00000428445 ZSCAN12O43309 604 aa15.32■□□□□ 0.04
VARS-216ENST00000428445 KLK8O60259 260 aa15.32■□□□□ 0.04
VARS-216ENST00000428445 CTNSO60931 367 aa15.32■□□□□ 0.04
VARS-216ENST00000428445 ETHE1O95571 254 aa15.32■□□□□ 0.04
VARS-216ENST00000428445 CCL3P10147 92 aa15.32■□□□□ 0.04
VARS-216ENST00000428445 CD22P20273 847 aa15.32■□□□□ 0.04
VARS-216ENST00000428445 ACVR2AP27037 513 aa15.32■□□□□ 0.04
VARS-216ENST00000428445 GSTM2P28161 218 aa15.32■□□□□ 0.04
VARS-216ENST00000428445 DNAJA1P31689 397 aaKnown RBP15.32■□□□□ 0.04
VARS-216ENST00000428445 ADH7P40394 386 aa15.32■□□□□ 0.04
VARS-216ENST00000428445 HSPA7P48741 367 aa15.32■□□□□ 0.04
VARS-216ENST00000428445 IST1P53990 364 aa15.32■□□□□ 0.04
VARS-216ENST00000428445 ELAVL1Q15717 326 aaKnown RBP15.32■□□□□ 0.04
VARS-216ENST00000428445 ABHD17CQ6PCB6 329 aa15.32■□□□□ 0.04
VARS-216ENST00000428445 PAOXQ6QHF9 649 aa15.32■□□□□ 0.04
VARS-216ENST00000428445 HSDL2Q6YN16 418 aa15.32■□□□□ 0.04
VARS-216ENST00000428445 CAPN12Q6ZSI9 719 aa15.32■□□□□ 0.04
VARS-216ENST00000428445 FRA10AC1Q70Z53 315 aa15.32■□□□□ 0.04
VARS-216ENST00000428445 UBE3DQ7Z6J8 389 aa15.32■□□□□ 0.04
VARS-216ENST00000428445 OR4N5Q8IXE1 308 aa15.32■□□□□ 0.04
VARS-216ENST00000428445 KLHL7Q8IXQ5 586 aa15.32■□□□□ 0.04
VARS-216ENST00000428445 ZNF595Q8IYB9 648 aa15.32■□□□□ 0.04
VARS-216ENST00000428445 TMEM132CQ8N3T6 1108 aa15.32■□□□□ 0.04
VARS-216ENST00000428445 TTLQ8NG68 377 aa15.32■□□□□ 0.04
VARS-216ENST00000428445 OR2L5Q8NG80 312 aa15.32■□□□□ 0.04
VARS-216ENST00000428445 SERINC2Q96SA4 455 aa15.32■□□□□ 0.04
VARS-216ENST00000428445 MAPKAP1Q9BPZ7 522 aa15.32■□□□□ 0.04
VARS-216ENST00000428445 CAPS2Q9BXY5 557 aa15.32■□□□□ 0.04
VARS-216ENST00000428445 SMYD2Q9NRG4 433 aa15.32■□□□□ 0.04
VARS-216ENST00000428445 TUBA8Q9NY65 449 aaPredicted RBP15.32■□□□□ 0.04
VARS-216ENST00000428445 VTI1BQ9UEU0 232 aa15.32■□□□□ 0.04
VARS-216ENST00000428445 Q9UFV3 132 aa15.32■□□□□ 0.04
VARS-216ENST00000428445 MAP1AP78559 2803 aaPredicted RBP15.31■□□□□ 0.04
VARS-216ENST00000428445 FOXO6A8MYZ6 492 aa15.31■□□□□ 0.04
VARS-216ENST00000428445 C17orf105B2RV13 164 aa15.31■□□□□ 0.04
VARS-216ENST00000428445 ACOT7O00154 380 aa15.31■□□□□ 0.04
VARS-216ENST00000428445 CLEC3AO75596 197 aa15.31■□□□□ 0.04
VARS-216ENST00000428445 TCP1P17987 556 aaKnown RBP15.31■□□□□ 0.04
VARS-216ENST00000428445 HPDP32754 393 aaPredicted RBP15.31■□□□□ 0.04
VARS-216ENST00000428445 PIGAP37287 484 aa15.31■□□□□ 0.04
VARS-216ENST00000428445 RNF4P78317 190 aa15.31■□□□□ 0.04
VARS-216ENST00000428445 MGAT5Q09328 741 aa15.31■□□□□ 0.04
VARS-216ENST00000428445 STX4Q12846 297 aa15.31■□□□□ 0.04
VARS-216ENST00000428445 CBLBQ13191 982 aa15.31■□□□□ 0.04
VARS-216ENST00000428445 DOC2AQ14183 400 aa15.31■□□□□ 0.04
VARS-216ENST00000428445 TGFBIQ15582 683 aa15.31■□□□□ 0.04
VARS-216ENST00000428445 ADPRMQ3LIE5 342 aa15.31■□□□□ 0.04
VARS-216ENST00000428445 TRIM40Q6P9F5 258 aa15.31■□□□□ 0.04
VARS-216ENST00000428445 ZNF793Q6ZN11 406 aa15.31■□□□□ 0.04
VARS-216ENST00000428445 DGAT2L6Q6ZPD8 337 aa15.31■□□□□ 0.04
VARS-216ENST00000428445 FAM47EQ6ZV65 393 aa15.31■□□□□ 0.04
VARS-216ENST00000428445 ACAD11Q709F0 780 aa15.31■□□□□ 0.04
VARS-216ENST00000428445 TRILQ7L0X0 811 aa15.31■□□□□ 0.04
VARS-216ENST00000428445 SLC22A16Q86VW1 577 aa15.31■□□□□ 0.04
VARS-216ENST00000428445 KRT78Q8N1N4 520 aa15.31■□□□□ 0.04
VARS-216ENST00000428445 SNX31Q8N9S9 440 aa15.31■□□□□ 0.04
VARS-216ENST00000428445 SLC2A12Q8TD20 617 aa15.31■□□□□ 0.04
VARS-216ENST00000428445 TRIM31Q9BZY9 425 aa15.31■□□□□ 0.04
VARS-216ENST00000428445 PITHD1Q9GZP4 211 aaPredicted RBP15.31■□□□□ 0.04
VARS-216ENST00000428445 TRMT1Q9NXH9 659 aaKnown RBP15.31■□□□□ 0.04
VARS-216ENST00000428445 MTO1Q9Y2Z2 717 aaKnown RBP15.31■□□□□ 0.04
VARS-216ENST00000428445 HRKO00198 91 aa15.3■□□□□ 0.04
VARS-216ENST00000428445 CLGNO14967 610 aa15.3■□□□□ 0.04
VARS-216ENST00000428445 MTTPP55157 894 aa15.3■□□□□ 0.04
VARS-216ENST00000428445 FOXO1Q12778 655 aa15.3■□□□□ 0.04
VARS-216ENST00000428445 ASPHQ12797 758 aa15.3■□□□□ 0.04
VARS-216ENST00000428445 OR4D1Q15615 310 aa15.3■□□□□ 0.04
VARS-216ENST00000428445 CES4AQ5XG92 561 aa15.3■□□□□ 0.04
VARS-216ENST00000428445 RTL4Q6ZR62 310 aa15.3■□□□□ 0.04
VARS-216ENST00000428445 GPALPP1Q8IXQ4 340 aa15.3■□□□□ 0.04
VARS-216ENST00000428445 RNF175Q8N4F7 328 aa15.3■□□□□ 0.04
VARS-216ENST00000428445 MORN4Q8NDC4 146 aa15.3■□□□□ 0.04
VARS-216ENST00000428445 FBXO36Q8NEA4 188 aa15.3■□□□□ 0.04
VARS-216ENST00000428445 C7orf57Q8NEG2 295 aa15.3■□□□□ 0.04
VARS-216ENST00000428445 ZNF721Q8TF20 911 aa15.3■□□□□ 0.04
VARS-216ENST00000428445 ANKRD9Q96BM1 317 aaPredicted RBP15.3■□□□□ 0.04
VARS-216ENST00000428445 PPWD1Q96BP3 646 aaKnown RBP15.3■□□□□ 0.04
VARS-216ENST00000428445 VPS39Q96JC1 886 aa15.3■□□□□ 0.04
VARS-216ENST00000428445 FAM173AQ9BQD7 235 aa15.3■□□□□ 0.04
VARS-216ENST00000428445 SORBS1Q9BX66 1292 aaKnown RBP15.3■□□□□ 0.04
VARS-216ENST00000428445 NT5DC2Q9H857 520 aa15.3■□□□□ 0.04
VARS-216ENST00000428445 COPS7BQ9H9Q2 264 aaPredicted RBP15.3■□□□□ 0.04
VARS-216ENST00000428445 IL1RL2Q9HB29 575 aa15.3■□□□□ 0.04
VARS-216ENST00000428445 CCM2LQ9NUG4 571 aaPredicted RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms