RNA–Protein interactions for RNA: ENST00000427482.6

SH3GL3-202, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-202ENST00000427482 GKN2Q86XP6 184 aa25.23■■□□□ 1.63
SH3GL3-202ENST00000427482 RNF130Q86XS8 419 aa25.23■■□□□ 1.63
SH3GL3-202ENST00000427482 BAHD1Q8TBE0 780 aaPredicted RBP25.23■■□□□ 1.63
SH3GL3-202ENST00000427482 N4BP2L2Q92802 583 aaPredicted RBP25.23■■□□□ 1.63
SH3GL3-202ENST00000427482 MAL2Q969L2 176 aa25.23■■□□□ 1.63
SH3GL3-202ENST00000427482 KLHL25Q9H0H3 589 aa25.23■■□□□ 1.63
SH3GL3-202ENST00000427482 C1GALT1Q9NS00 363 aa25.23■■□□□ 1.63
SH3GL3-202ENST00000427482 DNAJB9Q9UBS3 223 aa25.23■■□□□ 1.63
SH3GL3-202ENST00000427482 ATG4BQ9Y4P1 393 aa25.23■■□□□ 1.63
SH3GL3-202ENST00000427482 SCN3AQ9NY46 2000 aa25.23■■□□□ 1.63
SH3GL3-202ENST00000427482 RNF103-CHMP3A0A140T963 221 aa25.22■■□□□ 1.63
SH3GL3-202ENST00000427482 P2RX6O15547 441 aa25.22■■□□□ 1.63
SH3GL3-202ENST00000427482 ZNF682O95780 498 aa25.22■■□□□ 1.63
SH3GL3-202ENST00000427482 UBTFL6P0CB48 400 aaPredicted RBP25.22■■□□□ 1.63
SH3GL3-202ENST00000427482 TEAD4Q15561 434 aa25.22■■□□□ 1.63
SH3GL3-202ENST00000427482 FKBP9P1Q75LS8 142 aa25.22■■□□□ 1.63
SH3GL3-202ENST00000427482 CBLL1Q75N03 491 aa25.22■■□□□ 1.63
SH3GL3-202ENST00000427482 GALNT10Q86SR1 603 aa25.22■■□□□ 1.63
SH3GL3-202ENST00000427482 LMX1AQ8TE12 382 aa25.22■■□□□ 1.63
SH3GL3-202ENST00000427482 UTP15Q8TED0 518 aaKnown RBP25.22■■□□□ 1.63
SH3GL3-202ENST00000427482 ZFYVE21Q9BQ24 234 aa25.22■■□□□ 1.63
SH3GL3-202ENST00000427482 TMEM121BQ9BXQ6 578 aaPredicted RBP25.22■■□□□ 1.63
SH3GL3-202ENST00000427482 TMEM38AQ9H6F2 299 aa25.22■■□□□ 1.63
SH3GL3-202ENST00000427482 SIRT3Q9NTG7 399 aaPredicted RBP25.22■■□□□ 1.63
SH3GL3-202ENST00000427482 LYARQ9NX58 379 aaKnown RBP25.22■■□□□ 1.63
SH3GL3-202ENST00000427482 SNX11Q9Y5W9 270 aa25.22■■□□□ 1.63
SH3GL3-202ENST00000427482 SNX8Q9Y5X2 465 aa25.22■■□□□ 1.63
SH3GL3-202ENST00000427482 PRKRAO75569 313 aaKnown RBP25.21■■□□□ 1.63
SH3GL3-202ENST00000427482 ZNF888P0CJ79 500 aaPredicted RBP25.21■■□□□ 1.63
SH3GL3-202ENST00000427482 PVRP15151 417 aa25.21■■□□□ 1.63
SH3GL3-202ENST00000427482 CASP9P55211 416 aa25.21■■□□□ 1.63
SH3GL3-202ENST00000427482 NXPH1P58417 271 aa25.21■■□□□ 1.63
SH3GL3-202ENST00000427482 RBBP4Q09028 425 aa25.21■■□□□ 1.63
SH3GL3-202ENST00000427482 CHCHD2P9Q5T1J5 151 aaPredicted RBP25.21■■□□□ 1.63
SH3GL3-202ENST00000427482 EIF3MQ7L2H7 374 aaKnown RBP25.21■■□□□ 1.63
SH3GL3-202ENST00000427482 PSMA8Q8TAA3 256 aa25.21■■□□□ 1.63
SH3GL3-202ENST00000427482 SLC35C2Q9NQQ7 365 aa25.21■■□□□ 1.63
SH3GL3-202ENST00000427482 BATF3Q9NR55 127 aa25.21■■□□□ 1.63
SH3GL3-202ENST00000427482 FBXW2Q9UKT8 454 aa25.21■■□□□ 1.63
SH3GL3-202ENST00000427482 MAP4K5Q9Y4K4 846 aa25.21■■□□□ 1.63
SH3GL3-202ENST00000427482 AIFM1O95831 613 aa25.21■■□□□ 1.63
SH3GL3-202ENST00000427482 CST1P01037 141 aa25.21■■□□□ 1.63
SH3GL3-202ENST00000427482 LYNP07948 512 aa25.21■■□□□ 1.63
SH3GL3-202ENST00000427482 ZNF23P17027 643 aa25.21■■□□□ 1.63
SH3GL3-202ENST00000427482 MAGEA2P43356 314 aa25.21■■□□□ 1.63
SH3GL3-202ENST00000427482 MAZP56270 477 aaKnown RBP25.21■■□□□ 1.63
SH3GL3-202ENST00000427482 BTN3A2P78410 334 aa25.21■■□□□ 1.63
SH3GL3-202ENST00000427482 HSPB3Q12988 150 aa25.21■■□□□ 1.63
SH3GL3-202ENST00000427482 SAXO2Q658L1 398 aa25.21■■□□□ 1.63
SH3GL3-202ENST00000427482 RNF44Q7L0R7 432 aa25.21■■□□□ 1.63
SH3GL3-202ENST00000427482 AVL9Q8NBF6 648 aa25.21■■□□□ 1.63
SH3GL3-202ENST00000427482 OR10Q1Q8NGQ4 319 aa25.21■■□□□ 1.63
SH3GL3-202ENST00000427482 RSC1A1Q92681 617 aa25.21■■□□□ 1.63
SH3GL3-202ENST00000427482 TMBIM1Q969X1 311 aa25.21■■□□□ 1.63
SH3GL3-202ENST00000427482 NEURL3Q96EH8 262 aa25.21■■□□□ 1.63
SH3GL3-202ENST00000427482 ASPSCR1Q9BZE9 553 aa25.21■■□□□ 1.63
SH3GL3-202ENST00000427482 SPAG17Q6Q759 2223 aa25.21■■□□□ 1.63
SH3GL3-202ENST00000427482 TMEM131Q92545 1883 aa25.2■■□□□ 1.63
SH3GL3-202ENST00000427482 SMIM10L1P0DMW3 83 aa25.2■■□□□ 1.62
SH3GL3-202ENST00000427482 FASLGP48023 281 aa25.2■■□□□ 1.62
SH3GL3-202ENST00000427482 PPP1CAP62136 330 aa25.2■■□□□ 1.62
SH3GL3-202ENST00000427482 DGLUCYQ7Z3D6 616 aa25.2■■□□□ 1.62
SH3GL3-202ENST00000427482 CAMKVQ8NCB2 501 aa25.2■■□□□ 1.62
SH3GL3-202ENST00000427482 SMIM10Q96HG1 83 aa25.2■■□□□ 1.62
SH3GL3-202ENST00000427482 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa25.19■■□□□ 1.62
SH3GL3-202ENST00000427482 DLGAP1O14490 977 aa25.19■■□□□ 1.62
SH3GL3-202ENST00000427482 EI24O14681 340 aa25.19■■□□□ 1.62
SH3GL3-202ENST00000427482 VILLO15195 856 aa25.19■■□□□ 1.62
SH3GL3-202ENST00000427482 SEMG1P04279 462 aa25.19■■□□□ 1.62
SH3GL3-202ENST00000427482 CDK9P50750 372 aaKnown RBP25.19■■□□□ 1.62
SH3GL3-202ENST00000427482 CRYBA2P53672 197 aa25.19■■□□□ 1.62
SH3GL3-202ENST00000427482 NHSL2Q5HYW2 709 aa25.19■■□□□ 1.62
SH3GL3-202ENST00000427482 FRMPD2BQ6IN97 320 aa25.19■■□□□ 1.62
SH3GL3-202ENST00000427482 TMEM214Q6NUQ4 689 aaKnown RBP25.19■■□□□ 1.62
SH3GL3-202ENST00000427482 TMEFF1Q8IYR6 380 aa25.19■■□□□ 1.62
SH3GL3-202ENST00000427482 ROGDIQ9GZN7 287 aa25.19■■□□□ 1.62
SH3GL3-202ENST00000427482 POMT2Q9UKY4 750 aa25.19■■□□□ 1.62
SH3GL3-202ENST00000427482 DOLKQ9UPQ8 538 aa25.19■■□□□ 1.62
SH3GL3-202ENST00000427482 LOC105369274A0A096LPK9 316 aa25.19■■□□□ 1.62
SH3GL3-202ENST00000427482 LOC102723532A0A0G2JNH3 316 aa25.19■■□□□ 1.62
SH3GL3-202ENST00000427482 GLOD5A6NK44 160 aa25.19■■□□□ 1.62
SH3GL3-202ENST00000427482 PGRMC2O15173 223 aa25.19■■□□□ 1.62
SH3GL3-202ENST00000427482 PROM1O43490 865 aa25.19■■□□□ 1.62
SH3GL3-202ENST00000427482 PRAMEF10O60809 474 aa25.19■■□□□ 1.62
SH3GL3-202ENST00000427482 GCM2O75603 506 aaPredicted RBP25.19■■□□□ 1.62
SH3GL3-202ENST00000427482 TYRP1P17643 537 aa25.19■■□□□ 1.62
SH3GL3-202ENST00000427482 EEF1A2Q05639 463 aaKnown RBP25.19■■□□□ 1.62
SH3GL3-202ENST00000427482 SCARB2Q14108 478 aa25.19■■□□□ 1.62
SH3GL3-202ENST00000427482 LARP7Q4G0J3 582 aaKnown RBP eCLIP25.19■■□□□ 1.62
SH3GL3-202ENST00000427482 PRPF38BQ5VTL8 546 aaKnown RBP25.19■■□□□ 1.62
SH3GL3-202ENST00000427482 C18orf63Q68DL7 685 aa25.19■■□□□ 1.62
SH3GL3-202ENST00000427482 ARMC6Q6NXE6 501 aa25.19■■□□□ 1.62
SH3GL3-202ENST00000427482 UGT2A3Q6UWM9 527 aa25.19■■□□□ 1.62
SH3GL3-202ENST00000427482 OR4N4Q8N0Y3 316 aa25.19■■□□□ 1.62
SH3GL3-202ENST00000427482 ARL14Q8N4G2 192 aa25.19■■□□□ 1.62
SH3GL3-202ENST00000427482 DNASE2BQ8WZ79 361 aa25.19■■□□□ 1.62
SH3GL3-202ENST00000427482 AMDHD1Q96NU7 426 aa25.19■■□□□ 1.62
SH3GL3-202ENST00000427482 MAPKAP1Q9BPZ7 522 aa25.19■■□□□ 1.62
SH3GL3-202ENST00000427482 IER2Q9BTL4 223 aa25.19■■□□□ 1.62
SH3GL3-202ENST00000427482 GLIPR2Q9H4G4 154 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms