RNA–Protein interactions for RNA: ENST00000425967.7

FGFR1-211, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best) BASIC

Gene FGFR1, Length 5,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-211ENST00000425967 GSTM4Q03013 218 aa12.14□□□□□ -0.47
FGFR1-211ENST00000425967 ST3GAL4Q11206 333 aa12.14□□□□□ -0.47
FGFR1-211ENST00000425967 GRK1Q15835 563 aa12.14□□□□□ -0.47
FGFR1-211ENST00000425967 SGCAQ16586 387 aa12.14□□□□□ -0.47
FGFR1-211ENST00000425967 SLC35G1Q2M3R5 365 aa12.14□□□□□ -0.47
FGFR1-211ENST00000425967 KNDC1Q76NI1 1749 aa12.14□□□□□ -0.47
FGFR1-211ENST00000425967 ALDH16A1Q8IZ83 802 aa12.14□□□□□ -0.47
FGFR1-211ENST00000425967 OR10Q1Q8NGQ4 319 aa12.14□□□□□ -0.47
FGFR1-211ENST00000425967 ZUFSPQ96AP4 578 aa12.14□□□□□ -0.47
FGFR1-211ENST00000425967 IMP4Q96G21 291 aaKnown RBP12.14□□□□□ -0.47
FGFR1-211ENST00000425967 PEBP4Q96S96 227 aa12.14□□□□□ -0.47
FGFR1-211ENST00000425967 HERC2P3Q9BVR0 1158 aa12.14□□□□□ -0.47
FGFR1-211ENST00000425967 MLXQ9UH92 298 aa12.14□□□□□ -0.47
FGFR1-211ENST00000425967 RNF6Q9Y252 685 aa12.14□□□□□ -0.47
FGFR1-211ENST00000425967 CDC123O75794 336 aaPredicted RBP12.14□□□□□ -0.47
FGFR1-211ENST00000425967 HRGP04196 525 aa12.14□□□□□ -0.47
FGFR1-211ENST00000425967 CD9P21926 228 aa12.14□□□□□ -0.47
FGFR1-211ENST00000425967 LEPRP48357 1165 aaKnown RBP12.14□□□□□ -0.47
FGFR1-211ENST00000425967 CDH15P55291 814 aa12.14□□□□□ -0.47
FGFR1-211ENST00000425967 GINS1Q14691 196 aa12.14□□□□□ -0.47
FGFR1-211ENST00000425967 NADK2Q4G0N4 442 aa12.14□□□□□ -0.47
FGFR1-211ENST00000425967 ALG10BQ5I7T1 473 aa12.14□□□□□ -0.47
FGFR1-211ENST00000425967 SHQ1Q6PI26 577 aaKnown RBP12.14□□□□□ -0.47
FGFR1-211ENST00000425967 NUP43Q8NFH3 380 aa12.14□□□□□ -0.47
FGFR1-211ENST00000425967 LRRC20Q8TCA0 184 aa12.14□□□□□ -0.47
FGFR1-211ENST00000425967 HSPA12BQ96MM6 686 aa12.14□□□□□ -0.47
FGFR1-211ENST00000425967 NECTIN4Q96NY8 510 aa12.14□□□□□ -0.47
FGFR1-211ENST00000425967 TGM7Q96PF1 710 aa12.14□□□□□ -0.47
FGFR1-211ENST00000425967 IRF2BPLQ9H1B7 796 aa12.14□□□□□ -0.47
FGFR1-211ENST00000425967 CMAHPQ9Y471 501 aa12.14□□□□□ -0.47
FGFR1-211ENST00000425967 CIB4A0PJX0 185 aa12.13□□□□□ -0.47
FGFR1-211ENST00000425967 BHMG1C9JSJ3 638 aaPredicted RBP12.13□□□□□ -0.47
FGFR1-211ENST00000425967 C11orf98E9PRG8 122 aa12.13□□□□□ -0.47
FGFR1-211ENST00000425967 SCO2O43819 266 aa12.13□□□□□ -0.47
FGFR1-211ENST00000425967 RAD51DO75771 328 aa12.13□□□□□ -0.47
FGFR1-211ENST00000425967 OR12D1P0DN82 309 aa12.13□□□□□ -0.47
FGFR1-211ENST00000425967 JUNDP17535 347 aa12.13□□□□□ -0.47
FGFR1-211ENST00000425967 STOMP27105 288 aa12.13□□□□□ -0.47
FGFR1-211ENST00000425967 ARL3P36405 182 aa12.13□□□□□ -0.47
FGFR1-211ENST00000425967 AGTR2P50052 363 aa12.13□□□□□ -0.47
FGFR1-211ENST00000425967 RPS15AP62244 130 aaKnown RBP12.13□□□□□ -0.47
FGFR1-211ENST00000425967 FADDQ13158 208 aa12.13□□□□□ -0.47
FGFR1-211ENST00000425967 C6orf136Q5SQH8 315 aa12.13□□□□□ -0.47
FGFR1-211ENST00000425967 ATG9BQ674R7 924 aa12.13□□□□□ -0.47
FGFR1-211ENST00000425967 UNQ6126/PRO20091Q6UXV3 157 aa12.13□□□□□ -0.47
FGFR1-211ENST00000425967 SERINC5Q86VE9 423 aa12.13□□□□□ -0.47
FGFR1-211ENST00000425967 CARM1Q86X55 608 aa12.13□□□□□ -0.47
FGFR1-211ENST00000425967 TREML1Q86YW5 311 aa12.13□□□□□ -0.47
FGFR1-211ENST00000425967 OR5L2Q8NGL0 311 aa12.13□□□□□ -0.47
FGFR1-211ENST00000425967 PLEKHO2Q8TD55 490 aa12.13□□□□□ -0.47
FGFR1-211ENST00000425967 FAM210AQ96ND0 272 aa12.13□□□□□ -0.47
FGFR1-211ENST00000425967 IL23AQ9NPF7 189 aa12.13□□□□□ -0.47
FGFR1-211ENST00000425967 UCKL1Q9NWZ5 548 aa12.13□□□□□ -0.47
FGFR1-211ENST00000425967 A0A096LPI6 279 aa12.13□□□□□ -0.47
FGFR1-211ENST00000425967 HEPACAM2A8MVW5 462 aa12.13□□□□□ -0.47
FGFR1-211ENST00000425967 GPR89AB7ZAQ6 455 aa12.13□□□□□ -0.47
FGFR1-211ENST00000425967 M0R129 80 aa12.13□□□□□ -0.47
FGFR1-211ENST00000425967 FAAHO00519 579 aa12.13□□□□□ -0.47
FGFR1-211ENST00000425967 GPR89BP0CG08 455 aa12.13□□□□□ -0.47
FGFR1-211ENST00000425967 ZNF35P13682 527 aa12.13□□□□□ -0.47
FGFR1-211ENST00000425967 TIA1P31483 386 aaKnown RBP eCLIP12.13□□□□□ -0.479e-8■■■□□ 17.6
FGFR1-211ENST00000425967 STK19P49842 368 aaPredicted RBP12.13□□□□□ -0.47
FGFR1-211ENST00000425967 GPR143P51810 404 aa12.13□□□□□ -0.47
FGFR1-211ENST00000425967 KIAA0319Q5VV43 1072 aa12.13□□□□□ -0.47
FGFR1-211ENST00000425967 ZNF709Q8N972 641 aa12.13□□□□□ -0.47
FGFR1-211ENST00000425967 OR8J3Q8NGG0 315 aa12.13□□□□□ -0.47
FGFR1-211ENST00000425967 NAA11Q9BSU3 229 aaPredicted RBP12.13□□□□□ -0.47
FGFR1-211ENST00000425967 TMEM165Q9HC07 324 aa12.13□□□□□ -0.47
FGFR1-211ENST00000425967 GABRQQ9UN88 632 aa12.13□□□□□ -0.47
FGFR1-211ENST00000425967 GOLGA4Q13439 2230 aaKnown RBP12.13□□□□□ -0.47
FGFR1-211ENST00000425967 OR6C70A6NIJ9 312 aa12.13□□□□□ -0.47
FGFR1-211ENST00000425967 LATS1O95835 1130 aa12.13□□□□□ -0.47
FGFR1-211ENST00000425967 IL3P08700 152 aa12.13□□□□□ -0.47
FGFR1-211ENST00000425967 PRKACGP22612 351 aa12.13□□□□□ -0.47
FGFR1-211ENST00000425967 MAGEA2P43356 314 aa12.13□□□□□ -0.47
FGFR1-211ENST00000425967 RPS3AP61247 264 aaKnown RBP12.13□□□□□ -0.47
FGFR1-211ENST00000425967 TRAM1Q15629 374 aa12.13□□□□□ -0.47
FGFR1-211ENST00000425967 SLC36A3Q495N2 470 aa12.13□□□□□ -0.47
FGFR1-211ENST00000425967 GRHL2Q6ISB3 625 aa12.13□□□□□ -0.47
FGFR1-211ENST00000425967 RPS27LQ71UM5 84 aaKnown RBP12.13□□□□□ -0.47
FGFR1-211ENST00000425967 TOR3AQ9H497 397 aa12.13□□□□□ -0.47
FGFR1-211ENST00000425967 C8orf33Q9H7E9 229 aaPredicted RBP12.13□□□□□ -0.47
FGFR1-211ENST00000425967 RDH8Q9NYR8 311 aa12.13□□□□□ -0.47
FGFR1-211ENST00000425967 ERVK-18Q9QC07 812 aa12.13□□□□□ -0.47
FGFR1-211ENST00000425967 MED1Q15648 1581 aaPredicted RBP12.13□□□□□ -0.47
FGFR1-211ENST00000425967 NFAT5O94916 1531 aa12.13□□□□□ -0.47
FGFR1-211ENST00000425967 UNC119BA6NIH7 251 aa12.13□□□□□ -0.47
FGFR1-211ENST00000425967 PLD2O14939 933 aa12.13□□□□□ -0.47
FGFR1-211ENST00000425967 SNAPC5O75971 98 aa12.13□□□□□ -0.47
FGFR1-211ENST00000425967 OR2B3O76000 313 aa12.13□□□□□ -0.47
FGFR1-211ENST00000425967 PDYNP01213 254 aa12.13□□□□□ -0.47
FGFR1-211ENST00000425967 PGCP20142 388 aa12.13□□□□□ -0.47
FGFR1-211ENST00000425967 EDNRBP24530 442 aa12.13□□□□□ -0.47
FGFR1-211ENST00000425967 MLLT1Q03111 559 aaPredicted RBP12.13□□□□□ -0.47
FGFR1-211ENST00000425967 SLAMF1Q13291 335 aa12.13□□□□□ -0.47
FGFR1-211ENST00000425967 CATSPEREQ5SY80 951 aa12.13□□□□□ -0.47
FGFR1-211ENST00000425967 CSNK1A1LQ8N752 337 aa12.13□□□□□ -0.47
FGFR1-211ENST00000425967 GATSQ8NAP1 163 aa12.13□□□□□ -0.47
FGFR1-211ENST00000425967 SLC22A8Q8TCC7 542 aa12.13□□□□□ -0.47
FGFR1-211ENST00000425967 ZC3H10Q96K80 434 aaKnown RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms