RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 CEBPEQ15744 281 aa11.37□□□□□ -0.59
HLA-DQB3-203ENST00000425319 HYAL4Q2M3T9 481 aa11.37□□□□□ -0.59
HLA-DQB3-203ENST00000425319 AP5B1Q2VPB7 878 aa11.37□□□□□ -0.59
HLA-DQB3-203ENST00000425319 EMC4Q5J8M3 183 aa11.37□□□□□ -0.59
HLA-DQB3-203ENST00000425319 TEDDM1Q5T9Z0 273 aa11.37□□□□□ -0.59
HLA-DQB3-203ENST00000425319 TMEM198Q66K66 360 aa11.37□□□□□ -0.59
HLA-DQB3-203ENST00000425319 CHSY3Q70JA7 882 aa11.37□□□□□ -0.59
HLA-DQB3-203ENST00000425319 MAATS1Q7Z4T9 603 aa11.37□□□□□ -0.59
HLA-DQB3-203ENST00000425319 CLNKQ7Z7G1 428 aa11.37□□□□□ -0.59
HLA-DQB3-203ENST00000425319 ZZZ3Q8IYH5 903 aa11.37□□□□□ -0.59
HLA-DQB3-203ENST00000425319 SHISA5Q8N114 240 aa11.37□□□□□ -0.59
HLA-DQB3-203ENST00000425319 TMEM251Q8N6I4 163 aa11.37□□□□□ -0.59
HLA-DQB3-203ENST00000425319 FAM47BQ8NA70 645 aa11.37□□□□□ -0.59
HLA-DQB3-203ENST00000425319 MS4A6EQ96DS6 147 aa11.37□□□□□ -0.59
HLA-DQB3-203ENST00000425319 KCNC2Q96PR1 638 aa11.37□□□□□ -0.59
HLA-DQB3-203ENST00000425319 KRT12Q99456 494 aa11.37□□□□□ -0.59
HLA-DQB3-203ENST00000425319 CXXC4Q9H2H0 198 aa11.37□□□□□ -0.59
HLA-DQB3-203ENST00000425319 LIN28AQ9H9Z2 209 aaKnown RBP11.37□□□□□ -0.59
HLA-DQB3-203ENST00000425319 RASSF1Q9NS23 344 aa11.37□□□□□ -0.59
HLA-DQB3-203ENST00000425319 MS4A12Q9NXJ0 267 aa11.37□□□□□ -0.59
HLA-DQB3-203ENST00000425319 QPCTLQ9NXS2 382 aa11.37□□□□□ -0.59
HLA-DQB3-203ENST00000425319 NSMCE4AQ9NXX6 385 aa11.37□□□□□ -0.59
HLA-DQB3-203ENST00000425319 CNIH4Q9P003 139 aa11.37□□□□□ -0.59
HLA-DQB3-203ENST00000425319 JRKLQ9Y4A0 524 aa11.37□□□□□ -0.59
HLA-DQB3-203ENST00000425319 OARD1Q9Y530 152 aa11.37□□□□□ -0.59
HLA-DQB3-203ENST00000425319 CPAMD8Q8IZJ3 1885 aa11.37□□□□□ -0.59
HLA-DQB3-203ENST00000425319 OTOGQ6ZRI0 2925 aa11.37□□□□□ -0.59
HLA-DQB3-203ENST00000425319 POLQO75417 2590 aa11.36□□□□□ -0.59
HLA-DQB3-203ENST00000425319 ANKRD17O75179 2603 aaKnown RBP11.36□□□□□ -0.59
HLA-DQB3-203ENST00000425319 A0A0G2JNJ9 132 aa11.36□□□□□ -0.59
HLA-DQB3-203ENST00000425319 IQANK1A0A1B0GTG1 560 aa11.36□□□□□ -0.59
HLA-DQB3-203ENST00000425319 FAM171A2A8MVW0 826 aa11.36□□□□□ -0.59
HLA-DQB3-203ENST00000425319 C17orf105B2RV13 164 aa11.36□□□□□ -0.59
HLA-DQB3-203ENST00000425319 PGRMC1O00264 195 aaKnown RBP11.36□□□□□ -0.59
HLA-DQB3-203ENST00000425319 GOSR1O95249 250 aa11.36□□□□□ -0.59
HLA-DQB3-203ENST00000425319 GCKP35557 465 aa11.36□□□□□ -0.59
HLA-DQB3-203ENST00000425319 MAGEA3P43357 314 aa11.36□□□□□ -0.59
HLA-DQB3-203ENST00000425319 FNTAP49354 379 aa11.36□□□□□ -0.59
HLA-DQB3-203ENST00000425319 HK2P52789 917 aa11.36□□□□□ -0.59
HLA-DQB3-203ENST00000425319 RPP38P78345 283 aaKnown RBP11.36□□□□□ -0.59
HLA-DQB3-203ENST00000425319 SLBPQ14493 270 aaKnown RBP eCLIP11.36□□□□□ -0.59
HLA-DQB3-203ENST00000425319 MPEG1Q2M385 716 aa11.36□□□□□ -0.59
HLA-DQB3-203ENST00000425319 XKR6Q5GH73 641 aa11.36□□□□□ -0.59
HLA-DQB3-203ENST00000425319 RBM20Q5T481 1227 aaKnown RBP11.36□□□□□ -0.59
HLA-DQB3-203ENST00000425319 SLC29A4Q7RTT9 530 aa11.36□□□□□ -0.59
HLA-DQB3-203ENST00000425319 CNTN4Q8IWV2 1026 aa11.36□□□□□ -0.59
HLA-DQB3-203ENST00000425319 PM20D2Q8IYS1 436 aa11.36□□□□□ -0.59
HLA-DQB3-203ENST00000425319 LRRC39Q96DD0 335 aa11.36□□□□□ -0.59
HLA-DQB3-203ENST00000425319 DGAT2Q96PD7 388 aa11.36□□□□□ -0.59
HLA-DQB3-203ENST00000425319 ALPK1Q96QP1 1244 aa11.36□□□□□ -0.59
HLA-DQB3-203ENST00000425319 TBCDQ9BTW9 1192 aa11.36□□□□□ -0.59
HLA-DQB3-203ENST00000425319 EFCAB11Q9BUY7 163 aa11.36□□□□□ -0.59
HLA-DQB3-203ENST00000425319 EHD1Q9H4M9 534 aa11.36□□□□□ -0.59
HLA-DQB3-203ENST00000425319 LYRM4Q9HD34 91 aa11.36□□□□□ -0.59
HLA-DQB3-203ENST00000425319 DEPPQ9NTK1 212 aa11.36□□□□□ -0.59
HLA-DQB3-203ENST00000425319 TXNDC16Q9P2K2 825 aa11.36□□□□□ -0.59
HLA-DQB3-203ENST00000425319 Q9UFV3 132 aa11.36□□□□□ -0.59
HLA-DQB3-203ENST00000425319 DAPP1Q9UN19 280 aa11.36□□□□□ -0.59
HLA-DQB3-203ENST00000425319 FBN2P35556 2912 aa11.36□□□□□ -0.59
HLA-DQB3-203ENST00000425319 F8P00451 2351 aa11.35□□□□□ -0.59
HLA-DQB3-203ENST00000425319 SCN2AQ99250 2005 aa11.35□□□□□ -0.59
HLA-DQB3-203ENST00000425319 A0A0G2JN53 185 aa11.35□□□□□ -0.59
HLA-DQB3-203ENST00000425319 TUBAL3A6NHL2 446 aa11.35□□□□□ -0.59
HLA-DQB3-203ENST00000425319 G3V3Y1 287 aa11.35□□□□□ -0.59
HLA-DQB3-203ENST00000425319 TP53I11O14683 189 aa11.35□□□□□ -0.59
HLA-DQB3-203ENST00000425319 CASKO14936 926 aa11.35□□□□□ -0.59
HLA-DQB3-203ENST00000425319 CPN2P22792 545 aa11.35□□□□□ -0.59
HLA-DQB3-203ENST00000425319 MSH2P43246 934 aa11.35□□□□□ -0.59
HLA-DQB3-203ENST00000425319 LIM2P55344 173 aa11.35□□□□□ -0.59
HLA-DQB3-203ENST00000425319 FLYWCH1Q4VC44 716 aa11.35□□□□□ -0.59
HLA-DQB3-203ENST00000425319 PIGGQ5H8A4 983 aa11.35□□□□□ -0.59
HLA-DQB3-203ENST00000425319 TBCELQ5QJ74 424 aa11.35□□□□□ -0.59
HLA-DQB3-203ENST00000425319 SLCO4C1Q6ZQN7 724 aa11.35□□□□□ -0.59
HLA-DQB3-203ENST00000425319 TAOK1Q7L7X3 1001 aa11.35□□□□□ -0.59
HLA-DQB3-203ENST00000425319 BIVMQ86UB2 503 aa11.35□□□□□ -0.59
HLA-DQB3-203ENST00000425319 RASGEF1CQ8N431 466 aa11.35□□□□□ -0.59
HLA-DQB3-203ENST00000425319 RPRMLQ8N4K4 120 aa11.35□□□□□ -0.59
HLA-DQB3-203ENST00000425319 SNX31Q8N9S9 440 aa11.35□□□□□ -0.59
HLA-DQB3-203ENST00000425319 PTCD3Q96EY7 689 aaKnown RBP11.35□□□□□ -0.59
HLA-DQB3-203ENST00000425319 TSPAN17Q96FV3 270 aa11.35□□□□□ -0.59
HLA-DQB3-203ENST00000425319 CFAP36Q96G28 342 aa11.35□□□□□ -0.59
HLA-DQB3-203ENST00000425319 SCYL1Q96KG9 808 aa11.35□□□□□ -0.59
HLA-DQB3-203ENST00000425319 JSRP1Q96MG2 331 aaPredicted RBP11.35□□□□□ -0.59
HLA-DQB3-203ENST00000425319 GPATCH1Q9BRR8 931 aaKnown RBP11.35□□□□□ -0.59
HLA-DQB3-203ENST00000425319 PELOQ9BRX2 385 aaKnown RBP11.35□□□□□ -0.59
HLA-DQB3-203ENST00000425319 PHACTR1Q9C0D0 580 aa11.35□□□□□ -0.59
HLA-DQB3-203ENST00000425319 SPNS1Q9H2V7 528 aa11.35□□□□□ -0.59
HLA-DQB3-203ENST00000425319 NEUROD4Q9HD90 331 aa11.35□□□□□ -0.59
HLA-DQB3-203ENST00000425319 ZFP64Q9NPA5 681 aa11.35□□□□□ -0.59
HLA-DQB3-203ENST00000425319 DNAJC11Q9NVH1 559 aa11.35□□□□□ -0.59
HLA-DQB3-203ENST00000425319 WWOXQ9NZC7 414 aa11.35□□□□□ -0.59
HLA-DQB3-203ENST00000425319 ZNF629Q9UEG4 869 aaPredicted RBP11.35□□□□□ -0.59
HLA-DQB3-203ENST00000425319 ADGRE2Q9UHX3 823 aa11.35□□□□□ -0.59
HLA-DQB3-203ENST00000425319 L3MBTL1Q9Y468 752 aa11.35□□□□□ -0.59
HLA-DQB3-203ENST00000425319 NCOA6Q14686 2063 aaPredicted RBP11.34□□□□□ -0.59
HLA-DQB3-203ENST00000425319 A6NNC1 897 aa11.34□□□□□ -0.59
HLA-DQB3-203ENST00000425319 DNALI1O14645 258 aaPredicted RBP11.34□□□□□ -0.59
HLA-DQB3-203ENST00000425319 ARHGEF9O43307 516 aa11.34□□□□□ -0.59
HLA-DQB3-203ENST00000425319 GLSO94925 669 aaPredicted RBP11.34□□□□□ -0.59
HLA-DQB3-203ENST00000425319 RAF1P04049 648 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms