RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 SORBS1Q9BX66 1292 aaKnown RBP10.28□□□□□ -0.76
SSBP3-206ENST00000420121 ZNF717Q9BY31 904 aaPredicted RBP10.28□□□□□ -0.76
SSBP3-206ENST00000420121 LYRM4Q9HD34 91 aa10.28□□□□□ -0.76
SSBP3-206ENST00000420121 OPTCQ9UBM4 332 aa10.28□□□□□ -0.76
SSBP3-206ENST00000420121 TSC22D4Q9Y3Q8 395 aa10.28□□□□□ -0.76
SSBP3-206ENST00000420121 NCKAP5O14513 1909 aa10.28□□□□□ -0.76
SSBP3-206ENST00000420121 PDZD2O15018 2839 aa10.28□□□□□ -0.76
SSBP3-206ENST00000420121 PKDREJQ9NTG1 2253 aa10.27□□□□□ -0.76
SSBP3-206ENST00000420121 A0A087X1B8 175 aa10.27□□□□□ -0.77
SSBP3-206ENST00000420121 A0A088AWK7 358 aa10.27□□□□□ -0.77
SSBP3-206ENST00000420121 A0A096LPK6 155 aa10.27□□□□□ -0.77
SSBP3-206ENST00000420121 TRGV8A0A0C4DH27 118 aa10.27□□□□□ -0.77
SSBP3-206ENST00000420121 NPIPA5E9PKD4 350 aa10.27□□□□□ -0.77
SSBP3-206ENST00000420121 CCL21O00585 134 aa10.27□□□□□ -0.77
SSBP3-206ENST00000420121 CLDN4O14493 209 aa10.27□□□□□ -0.77
SSBP3-206ENST00000420121 ZNF354AO60765 605 aaPredicted RBP10.27□□□□□ -0.77
SSBP3-206ENST00000420121 LDB3O75112 727 aa10.27□□□□□ -0.77
SSBP3-206ENST00000420121 SH3BGRLO75368 114 aa10.27□□□□□ -0.77
SSBP3-206ENST00000420121 ITGA10O75578 1167 aa10.27□□□□□ -0.77
SSBP3-206ENST00000420121 KLHL2O95198 593 aa10.27□□□□□ -0.77
SSBP3-206ENST00000420121 TGFB1P01137 390 aa10.27□□□□□ -0.77
SSBP3-206ENST00000420121 ZNF10P21506 573 aaPredicted RBP10.27□□□□□ -0.77
SSBP3-206ENST00000420121 HIST1H1TP22492 207 aaPredicted RBP10.27□□□□□ -0.77
SSBP3-206ENST00000420121 GRNP28799 593 aaKnown RBP10.27□□□□□ -0.77
SSBP3-206ENST00000420121 HPDP32754 393 aaPredicted RBP10.27□□□□□ -0.77
SSBP3-206ENST00000420121 IGLV3-21P80748 117 aaPredicted RBP10.27□□□□□ -0.77
SSBP3-206ENST00000420121 HSF1Q00613 529 aa10.27□□□□□ -0.77
SSBP3-206ENST00000420121 ALDH6A1Q02252 535 aaKnown RBP10.27□□□□□ -0.77
SSBP3-206ENST00000420121 ACAP2Q15057 778 aa10.27□□□□□ -0.77
SSBP3-206ENST00000420121 MAPKAPK3Q16644 382 aa10.27□□□□□ -0.77
SSBP3-206ENST00000420121 HIST2H2ACQ16777 129 aaPredicted RBP10.27□□□□□ -0.77
SSBP3-206ENST00000420121 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.27□□□□□ -0.77
SSBP3-206ENST00000420121 KRTCAP3Q53RY4 240 aa10.27□□□□□ -0.77
SSBP3-206ENST00000420121 TECRLQ5HYJ1 363 aa10.27□□□□□ -0.77
SSBP3-206ENST00000420121 DEPDC1Q5TB30 811 aa10.27□□□□□ -0.77
SSBP3-206ENST00000420121 KHDRBS2Q5VWX1 349 aaKnown RBP10.27□□□□□ -0.77
SSBP3-206ENST00000420121 HIST2H2AA3Q6FI13 130 aa10.27□□□□□ -0.77
SSBP3-206ENST00000420121 MED27Q6P2C8 311 aa10.27□□□□□ -0.77
SSBP3-206ENST00000420121 MDGA2Q7Z553 956 aa10.27□□□□□ -0.77
SSBP3-206ENST00000420121 CCDC91Q7Z6B0 441 aa10.27□□□□□ -0.77
SSBP3-206ENST00000420121 TEX9Q8N6V9 391 aa10.27□□□□□ -0.77
SSBP3-206ENST00000420121 HORMAD2Q8N7B1 307 aa10.27□□□□□ -0.77
SSBP3-206ENST00000420121 ANKRD9Q96BM1 317 aaPredicted RBP10.27□□□□□ -0.77
SSBP3-206ENST00000420121 ALOXE3Q9BYJ1 711 aa10.27□□□□□ -0.77
SSBP3-206ENST00000420121 OR51B5Q9H339 312 aa10.27□□□□□ -0.77
SSBP3-206ENST00000420121 CDC42EP4Q9H3Q1 356 aaKnown RBP10.27□□□□□ -0.77
SSBP3-206ENST00000420121 COPS7BQ9H9Q2 264 aaPredicted RBP10.27□□□□□ -0.77
SSBP3-206ENST00000420121 LIN28AQ9H9Z2 209 aaKnown RBP10.27□□□□□ -0.77
SSBP3-206ENST00000420121 ZNF358Q9NW07 568 aa10.27□□□□□ -0.77
SSBP3-206ENST00000420121 VTI1BQ9UEU0 232 aa10.27□□□□□ -0.77
SSBP3-206ENST00000420121 TINAGQ9UJW2 476 aa10.27□□□□□ -0.77
SSBP3-206ENST00000420121 FBXW2Q9UKT8 454 aa10.27□□□□□ -0.77
SSBP3-206ENST00000420121 NPIPA1Q9UND3 350 aa10.27□□□□□ -0.77
SSBP3-206ENST00000420121 MRPS33Q9Y291 106 aaKnown RBP10.27□□□□□ -0.77
SSBP3-206ENST00000420121 EXPH5Q8NEV8 1989 aa10.26□□□□□ -0.77
SSBP3-206ENST00000420121 CCDC189A1A4V9 331 aa10.26□□□□□ -0.77
SSBP3-206ENST00000420121 SAP18O00422 153 aaKnown RBP10.26□□□□□ -0.77
SSBP3-206ENST00000420121 PLPP1O14494 284 aa10.26□□□□□ -0.77
SSBP3-206ENST00000420121 FCHO1O14526 889 aa10.26□□□□□ -0.77
SSBP3-206ENST00000420121 ASNA1O43681 348 aa10.26□□□□□ -0.77
SSBP3-206ENST00000420121 FGF17O60258 216 aa10.26□□□□□ -0.77
SSBP3-206ENST00000420121 URI1O94763 535 aaPredicted RBP10.26□□□□□ -0.77
SSBP3-206ENST00000420121 SIX3O95343 332 aaPredicted RBP10.26□□□□□ -0.77
SSBP3-206ENST00000420121 ETHE1O95571 254 aa10.26□□□□□ -0.77
SSBP3-206ENST00000420121 PCNAP12004 261 aa10.26□□□□□ -0.77
SSBP3-206ENST00000420121 EPB42P16452 691 aa10.26□□□□□ -0.77
SSBP3-206ENST00000420121 NR0B1P51843 470 aaKnown RBP10.26□□□□□ -0.77
SSBP3-206ENST00000420121 ALDH18A1P54886 795 aaKnown RBP10.26□□□□□ -0.77
SSBP3-206ENST00000420121 ID2Q02363 134 aa10.26□□□□□ -0.77
SSBP3-206ENST00000420121 TGM3Q08188 693 aa10.26□□□□□ -0.77
SSBP3-206ENST00000420121 PCBP2Q15366 365 aaKnown RBP eCLIP10.26□□□□□ -0.77
SSBP3-206ENST00000420121 CDSNQ15517 529 aa10.26□□□□□ -0.77
SSBP3-206ENST00000420121 PFKFB4Q16877 469 aa10.26□□□□□ -0.77
SSBP3-206ENST00000420121 WHAMMP3Q1A5X7 153 aa10.26□□□□□ -0.77
SSBP3-206ENST00000420121 FAM83EQ2M2I3 478 aa10.26□□□□□ -0.77
SSBP3-206ENST00000420121 TMEM35AQ53FP2 167 aa10.26□□□□□ -0.77
SSBP3-206ENST00000420121 MRM1Q6IN84 353 aaKnown RBP10.26□□□□□ -0.77
SSBP3-206ENST00000420121 DGAT2L6Q6ZPD8 337 aa10.26□□□□□ -0.77
SSBP3-206ENST00000420121 NCCRP1Q6ZVX7 275 aaPredicted RBP10.26□□□□□ -0.77
SSBP3-206ENST00000420121 TICAM1Q8IUC6 712 aa10.26□□□□□ -0.77
SSBP3-206ENST00000420121 SPPL2CQ8IUH8 684 aa10.26□□□□□ -0.77
SSBP3-206ENST00000420121 LURAP1LQ8IV03 231 aa10.26□□□□□ -0.77
SSBP3-206ENST00000420121 SULF2Q8IWU5 870 aa10.26□□□□□ -0.77
SSBP3-206ENST00000420121 CYP4Z2PQ8N1L4 340 aa10.26□□□□□ -0.77
SSBP3-206ENST00000420121 TMEM132CQ8N3T6 1108 aa10.26□□□□□ -0.77
SSBP3-206ENST00000420121 SRFBP1Q8NEF9 429 aaKnown RBP10.26□□□□□ -0.77
SSBP3-206ENST00000420121 C16orf52Q8NHV5 167 aa10.26□□□□□ -0.77
SSBP3-206ENST00000420121 HUS1BQ8NHY5 278 aa10.26□□□□□ -0.77
SSBP3-206ENST00000420121 WDR20Q8TBZ3 569 aa10.26□□□□□ -0.77
SSBP3-206ENST00000420121 SLC44A1Q8WWI5 657 aa10.26□□□□□ -0.77
SSBP3-206ENST00000420121 UBE2E3Q969T4 207 aa10.26□□□□□ -0.77
SSBP3-206ENST00000420121 CMTM7Q96FZ5 175 aa10.26□□□□□ -0.77
SSBP3-206ENST00000420121 ROGDIQ9GZN7 287 aa10.26□□□□□ -0.77
SSBP3-206ENST00000420121 DMRT3Q9NQL9 472 aa10.26□□□□□ -0.77
SSBP3-206ENST00000420121 DEPPQ9NTK1 212 aa10.26□□□□□ -0.77
SSBP3-206ENST00000420121 SH3BGRL2Q9UJC5 107 aa10.26□□□□□ -0.77
SSBP3-206ENST00000420121 ENTPD4Q9Y227 616 aa10.26□□□□□ -0.77
SSBP3-206ENST00000420121 PHF3Q92576 2039 aaKnown RBP10.26□□□□□ -0.77
SSBP3-206ENST00000420121 ADGRG4Q8IZF6 3080 aa10.25□□□□□ -0.77
SSBP3-206ENST00000420121 CREBBPQ92793 2442 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms