RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 PCDHGB3Q9Y5G1 929 aa9.43□□□□□ -0.9
TNFAIP3-202ENST00000420009 TRGV5A0A0B4J1U4 118 aa9.42□□□□□ -0.9
TNFAIP3-202ENST00000420009 SYNDIG1LA6NDD5 238 aa9.42□□□□□ -0.9
TNFAIP3-202ENST00000420009 SDR42E2A6NKP2 422 aa9.42□□□□□ -0.9
TNFAIP3-202ENST00000420009 HSPB2A8KAH6 182 aa9.42□□□□□ -0.9
TNFAIP3-202ENST00000420009 CCL3P10147 92 aa9.42□□□□□ -0.9
TNFAIP3-202ENST00000420009 CDKN2DP55273 166 aa9.42□□□□□ -0.9
TNFAIP3-202ENST00000420009 RAB38P57729 211 aa9.42□□□□□ -0.9
TNFAIP3-202ENST00000420009 BTN3A2P78410 334 aa9.42□□□□□ -0.9
TNFAIP3-202ENST00000420009 CCZ1BP86790 482 aa9.42□□□□□ -0.9
TNFAIP3-202ENST00000420009 CCZ1P86791 482 aaPredicted RBP9.42□□□□□ -0.9
TNFAIP3-202ENST00000420009 SLC13A2Q13183 592 aa9.42□□□□□ -0.9
TNFAIP3-202ENST00000420009 KEAP1Q14145 624 aa9.42□□□□□ -0.9
TNFAIP3-202ENST00000420009 SLC10A1Q14973 349 aa9.42□□□□□ -0.9
TNFAIP3-202ENST00000420009 HSPB2Q16082 182 aa9.42□□□□□ -0.9
TNFAIP3-202ENST00000420009 HSP90AA5PQ58FG0 334 aa9.42□□□□□ -0.9
TNFAIP3-202ENST00000420009 POMZP3Q6PJE2 187 aa9.42□□□□□ -0.9
TNFAIP3-202ENST00000420009 CLEC9AQ6UXN8 241 aa9.42□□□□□ -0.9
TNFAIP3-202ENST00000420009 FAM47EQ6ZV65 393 aa9.42□□□□□ -0.9
TNFAIP3-202ENST00000420009 TAOK1Q7L7X3 1001 aa9.42□□□□□ -0.9
TNFAIP3-202ENST00000420009 TMPRSS11BQ86T26 416 aa9.42□□□□□ -0.9
TNFAIP3-202ENST00000420009 ZNF595Q8IYB9 648 aa9.42□□□□□ -0.9
TNFAIP3-202ENST00000420009 ULK2Q8IYT8 1036 aa9.42□□□□□ -0.9
TNFAIP3-202ENST00000420009 TMEM132CQ8N3T6 1108 aa9.42□□□□□ -0.9
TNFAIP3-202ENST00000420009 FBXW8Q8N3Y1 598 aa9.42□□□□□ -0.9
TNFAIP3-202ENST00000420009 FAM47BQ8NA70 645 aa9.42□□□□□ -0.9
TNFAIP3-202ENST00000420009 C2CD4AQ8NCU7 369 aaPredicted RBP9.42□□□□□ -0.9
TNFAIP3-202ENST00000420009 MCUQ8NE86 351 aa9.42□□□□□ -0.9
TNFAIP3-202ENST00000420009 OR8K3Q8NH51 312 aa9.42□□□□□ -0.9
TNFAIP3-202ENST00000420009 ATL1Q8WXF7 558 aa9.42□□□□□ -0.9
TNFAIP3-202ENST00000420009 SERPINB12Q96P63 405 aa9.42□□□□□ -0.9
TNFAIP3-202ENST00000420009 BAG1Q99933 345 aaPredicted RBP9.42□□□□□ -0.9
TNFAIP3-202ENST00000420009 AIF1LQ9BQI0 150 aa9.42□□□□□ -0.9
TNFAIP3-202ENST00000420009 FAM167BQ9BTA0 163 aa9.42□□□□□ -0.9
TNFAIP3-202ENST00000420009 XAB2Q9HCS7 855 aaKnown RBP9.42□□□□□ -0.9
TNFAIP3-202ENST00000420009 SH2D2AQ9NP31 389 aa9.42□□□□□ -0.9
TNFAIP3-202ENST00000420009 SACM1LQ9NTJ5 587 aa9.42□□□□□ -0.9
TNFAIP3-202ENST00000420009 TRMT1Q9NXH9 659 aaKnown RBP9.42□□□□□ -0.9
TNFAIP3-202ENST00000420009 FOXD3Q9UJU5 478 aaPredicted RBP9.42□□□□□ -0.9
TNFAIP3-202ENST00000420009 JMJD1CQ15652 2540 aa9.42□□□□□ -0.9
TNFAIP3-202ENST00000420009 LRRC3CA6NJW4 275 aa9.41□□□□□ -0.9
TNFAIP3-202ENST00000420009 KIAA1324LA8MWY0 1029 aaPredicted RBP9.41□□□□□ -0.9
TNFAIP3-202ENST00000420009 CYR61O00622 381 aa9.41□□□□□ -0.9
TNFAIP3-202ENST00000420009 CLDN4O14493 209 aa9.41□□□□□ -0.9
TNFAIP3-202ENST00000420009 DVL2O14641 736 aa9.41□□□□□ -0.9
TNFAIP3-202ENST00000420009 NRDCO43847 1150 aa9.41□□□□□ -0.9
TNFAIP3-202ENST00000420009 GOSR1O95249 250 aa9.41□□□□□ -0.9
TNFAIP3-202ENST00000420009 ENO2P09104 434 aaPredicted RBP9.41□□□□□ -0.9
TNFAIP3-202ENST00000420009 PTMSP20962 102 aa9.41□□□□□ -0.9
TNFAIP3-202ENST00000420009 BMP5P22003 454 aa9.41□□□□□ -0.9
TNFAIP3-202ENST00000420009 TACR1P25103 407 aa9.41□□□□□ -0.9
TNFAIP3-202ENST00000420009 GABRB3P28472 473 aa9.41□□□□□ -0.9
TNFAIP3-202ENST00000420009 HNRNPH1P31943 449 aaKnown RBP9.41□□□□□ -0.9
TNFAIP3-202ENST00000420009 CEACAM8P31997 349 aaPredicted RBP9.41□□□□□ -0.9
TNFAIP3-202ENST00000420009 VPS41P49754 854 aa9.41□□□□□ -0.9
TNFAIP3-202ENST00000420009 ZNF75DP51815 510 aa9.41□□□□□ -0.9
TNFAIP3-202ENST00000420009 TERF1P54274 439 aa9.41□□□□□ -0.9
TNFAIP3-202ENST00000420009 STXBP1P61764 594 aaKnown RBP9.41□□□□□ -0.9
TNFAIP3-202ENST00000420009 DCAF7P61962 342 aa9.41□□□□□ -0.9
TNFAIP3-202ENST00000420009 RNF4P78317 190 aa9.41□□□□□ -0.9
TNFAIP3-202ENST00000420009 GPS1Q13098 491 aa9.41□□□□□ -0.9
TNFAIP3-202ENST00000420009 BMPR2Q13873 1038 aa9.41□□□□□ -0.9
TNFAIP3-202ENST00000420009 RBBP5Q15291 538 aaKnown RBP9.41□□□□□ -0.9
TNFAIP3-202ENST00000420009 TRIP13Q15645 432 aaPredicted RBP9.41□□□□□ -0.9
TNFAIP3-202ENST00000420009 ACSF3Q4G176 576 aaPredicted RBP9.41□□□□□ -0.9
TNFAIP3-202ENST00000420009 RBM20Q5T481 1227 aaKnown RBP9.41□□□□□ -0.9
TNFAIP3-202ENST00000420009 OPN5Q6U736 354 aa9.41□□□□□ -0.9
TNFAIP3-202ENST00000420009 NXPE4Q6UWF7 544 aa9.41□□□□□ -0.9
TNFAIP3-202ENST00000420009 SBSNQ6UWP8 590 aa9.41□□□□□ -0.9
TNFAIP3-202ENST00000420009 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.41□□□□□ -0.95e-6■■■■■ 29.9
TNFAIP3-202ENST00000420009 LRRC25Q8N386 305 aaPredicted RBP9.41□□□□□ -0.9
TNFAIP3-202ENST00000420009 ZNF321PQ8N8H1 164 aa9.41□□□□□ -0.9
TNFAIP3-202ENST00000420009 MORN4Q8NDC4 146 aa9.41□□□□□ -0.9
TNFAIP3-202ENST00000420009 OR14A16Q8NHC5 309 aa9.41□□□□□ -0.9
TNFAIP3-202ENST00000420009 PTPMT1Q8WUK0 201 aaPredicted RBP9.41□□□□□ -0.9
TNFAIP3-202ENST00000420009 SREK1Q8WXA9 508 aaKnown RBP9.41□□□□□ -0.9
TNFAIP3-202ENST00000420009 DAZLQ92904 295 aaKnown RBP9.41□□□□□ -0.9
TNFAIP3-202ENST00000420009 MS4A6EQ96DS6 147 aa9.41□□□□□ -0.9
TNFAIP3-202ENST00000420009 LRRC46Q96FV0 321 aa9.41□□□□□ -0.9
TNFAIP3-202ENST00000420009 QRFPRQ96P65 431 aa9.41□□□□□ -0.9
TNFAIP3-202ENST00000420009 CSF3RQ99062 836 aa9.41□□□□□ -0.9
TNFAIP3-202ENST00000420009 LDAHQ9H6V9 325 aa9.41□□□□□ -0.9
TNFAIP3-202ENST00000420009 MTRF1LQ9UGC7 380 aaKnown RBP9.41□□□□□ -0.9
TNFAIP3-202ENST00000420009 MRPS33Q9Y291 106 aaKnown RBP9.41□□□□□ -0.9
TNFAIP3-202ENST00000420009 CLCA3PQ9Y6N3 262 aa9.41□□□□□ -0.9
TNFAIP3-202ENST00000420009 A0A0G2JN53 185 aa9.4□□□□□ -0.9
TNFAIP3-202ENST00000420009 LRIT2A6NDA9 550 aa9.4□□□□□ -0.9
TNFAIP3-202ENST00000420009 PABPN1LA6NDY0 278 aaKnown RBP9.4□□□□□ -0.9
TNFAIP3-202ENST00000420009 FAM171A2A8MVW0 826 aa9.4□□□□□ -0.9
TNFAIP3-202ENST00000420009 KDM4EB2RXH2 506 aaPredicted RBP9.4□□□□□ -0.9
TNFAIP3-202ENST00000420009 ERI3O43414 337 aaKnown RBP9.4□□□□□ -0.9
TNFAIP3-202ENST00000420009 TBX6O95947 436 aaPredicted RBP9.4□□□□□ -0.9
TNFAIP3-202ENST00000420009 FGGP02679 453 aa9.4□□□□□ -0.9
TNFAIP3-202ENST00000420009 P04436 131 aa9.4□□□□□ -0.9
TNFAIP3-202ENST00000420009 RFPL3SP0C7P2 107 aa9.4□□□□□ -0.9
TNFAIP3-202ENST00000420009 EPXP11678 715 aa9.4□□□□□ -0.9
TNFAIP3-202ENST00000420009 CD53P19397 219 aa9.4□□□□□ -0.9
TNFAIP3-202ENST00000420009 PIGAP37287 484 aa9.4□□□□□ -0.9
TNFAIP3-202ENST00000420009 IL2P60568 153 aa9.4□□□□□ -0.9
TNFAIP3-202ENST00000420009 SORDQ00796 357 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms