RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 AUP1Q9Y679 476 aa3.39□□□□□ -1.87
HMGB1P49-201ENST00000418882 A0A087X0K7 114 aa3.38□□□□□ -1.87
HMGB1P49-201ENST00000418882 TEX48A0A1B0GUV7 120 aa3.38□□□□□ -1.87
HMGB1P49-201ENST00000418882 FRAT2O75474 233 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P49-201ENST00000418882 CLN5O75503 358 aa3.38□□□□□ -1.87
HMGB1P49-201ENST00000418882 GRAP2O75791 330 aa3.38□□□□□ -1.87
HMGB1P49-201ENST00000418882 LETM1O95202 739 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P49-201ENST00000418882 SKILP12757 684 aa3.38□□□□□ -1.87
HMGB1P49-201ENST00000418882 ID1P41134 155 aa3.38□□□□□ -1.87
HMGB1P49-201ENST00000418882 LCP2Q13094 533 aa3.38□□□□□ -1.87
HMGB1P49-201ENST00000418882 SCARB2Q14108 478 aa3.38□□□□□ -1.87
HMGB1P49-201ENST00000418882 NHLRC3Q5JS37 347 aa3.38□□□□□ -1.87
HMGB1P49-201ENST00000418882 ZNF506Q5JVG8 444 aa3.38□□□□□ -1.87
HMGB1P49-201ENST00000418882 KRTAP5-1Q6L8H4 278 aa3.38□□□□□ -1.87
HMGB1P49-201ENST00000418882 NUFIP2Q7Z417 695 aaKnown RBP3.38□□□□□ -1.87
HMGB1P49-201ENST00000418882 SH2D6Q7Z4S9 175 aa3.38□□□□□ -1.87
HMGB1P49-201ENST00000418882 WDR49Q8IV35 697 aa3.38□□□□□ -1.87
HMGB1P49-201ENST00000418882 C11orf53Q8IXP5 236 aa3.38□□□□□ -1.87
HMGB1P49-201ENST00000418882 OR8H3Q8N146 312 aa3.38□□□□□ -1.87
HMGB1P49-201ENST00000418882 ATAD1Q8NBU5 361 aa3.38□□□□□ -1.87
HMGB1P49-201ENST00000418882 RNF149Q8NC42 400 aa3.38□□□□□ -1.87
HMGB1P49-201ENST00000418882 OR6F1Q8NGZ6 308 aa3.38□□□□□ -1.87
HMGB1P49-201ENST00000418882 GOT1L1Q8NHS2 421 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P49-201ENST00000418882 RUNDC3BQ96NL0 473 aa3.38□□□□□ -1.87
HMGB1P49-201ENST00000418882 C17orf62Q9BQA9 187 aa3.38□□□□□ -1.87
HMGB1P49-201ENST00000418882 CUEDC2Q9H467 287 aa3.38□□□□□ -1.87
HMGB1P49-201ENST00000418882 S100A14Q9HCY8 104 aa3.38□□□□□ -1.87
HMGB1P49-201ENST00000418882 MED17Q9NVC6 651 aa3.38□□□□□ -1.87
HMGB1P49-201ENST00000418882 ARMCX3Q9UH62 379 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P49-201ENST00000418882 PSORS1C1Q9UIG5 152 aa3.38□□□□□ -1.87
HMGB1P49-201ENST00000418882 OOEPA6NGQ2 149 aa3.37□□□□□ -1.87
HMGB1P49-201ENST00000418882 SH3BGRLO75368 114 aa3.37□□□□□ -1.87
HMGB1P49-201ENST00000418882 MT-ND1P03886 318 aa3.37□□□□□ -1.87
HMGB1P49-201ENST00000418882 FHP07954 510 aa3.37□□□□□ -1.87
HMGB1P49-201ENST00000418882 FRKP42685 505 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P49-201ENST00000418882 FHITP49789 147 aa3.37□□□□□ -1.87
HMGB1P49-201ENST00000418882 MEP1BQ16820 701 aa3.37□□□□□ -1.87
HMGB1P49-201ENST00000418882 PCK2Q16822 640 aa3.37□□□□□ -1.87
HMGB1P49-201ENST00000418882 AGAP6Q5VW22 663 aa3.37□□□□□ -1.87
HMGB1P49-201ENST00000418882 RFWD3Q6PCD5 774 aa3.37□□□□□ -1.87
HMGB1P49-201ENST00000418882 GBP6Q6ZN66 633 aa3.37□□□□□ -1.87
HMGB1P49-201ENST00000418882 MSANTD1Q6ZTZ1 278 aa3.37□□□□□ -1.87
HMGB1P49-201ENST00000418882 TBC1D10CQ8IV04 446 aa3.37□□□□□ -1.87
HMGB1P49-201ENST00000418882 CCDC71Q8IV32 467 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P49-201ENST00000418882 KLHDC8AQ8IYD2 350 aa3.37□□□□□ -1.87
HMGB1P49-201ENST00000418882 ELMOD1Q8N336 334 aa3.37□□□□□ -1.87
HMGB1P49-201ENST00000418882 AFAP1L1Q8TED9 768 aa3.37□□□□□ -1.87
HMGB1P49-201ENST00000418882 SNRNP40Q96DI7 357 aaKnown RBP3.37□□□□□ -1.87
HMGB1P49-201ENST00000418882 ZNF274Q96GC6 653 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P49-201ENST00000418882 RANBP9Q96S59 729 aa3.37□□□□□ -1.87
HMGB1P49-201ENST00000418882 CLEC5AQ9NY25 188 aa3.37□□□□□ -1.87
HMGB1P49-201ENST00000418882 ZNF319Q9P2F9 582 aa3.37□□□□□ -1.87
HMGB1P49-201ENST00000418882 FBXO7Q9Y3I1 522 aa3.37□□□□□ -1.87
HMGB1P49-201ENST00000418882 ATP6AP2A0A1C7CYW4 349 aa3.36□□□□□ -1.87
HMGB1P49-201ENST00000418882 MAGEB16A2A368 324 aa3.36□□□□□ -1.87
HMGB1P49-201ENST00000418882 M0R296 226 aa3.36□□□□□ -1.87
HMGB1P49-201ENST00000418882 GH1P01241 217 aa3.36□□□□□ -1.87
HMGB1P49-201ENST00000418882 IGKV3-15P01624 115 aa3.36□□□□□ -1.87
HMGB1P49-201ENST00000418882 LYNP07948 512 aa3.36□□□□□ -1.87
HMGB1P49-201ENST00000418882 FAM200BP0CF97 657 aa3.36□□□□□ -1.87
HMGB1P49-201ENST00000418882 RPL9P32969 192 aaKnown RBP3.36□□□□□ -1.87
HMGB1P49-201ENST00000418882 RNLSQ5VYX0 342 aa3.36□□□□□ -1.87
HMGB1P49-201ENST00000418882 ZNF730Q6ZMV8 503 aa3.36□□□□□ -1.87
HMGB1P49-201ENST00000418882 FAM43BQ6ZT52 329 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P49-201ENST00000418882 ASPGQ86U10 573 aa3.36□□□□□ -1.87
HMGB1P49-201ENST00000418882 HOOK3Q86VS8 718 aa3.36□□□□□ -1.87
HMGB1P49-201ENST00000418882 KLHL30-AS1Q8NEE0 82 aa3.36□□□□□ -1.87
HMGB1P49-201ENST00000418882 OR7G3Q8NG95 312 aa3.36□□□□□ -1.87
HMGB1P49-201ENST00000418882 OR6T1Q8NGN1 323 aa3.36□□□□□ -1.87
HMGB1P49-201ENST00000418882 PCNPQ8WW12 178 aaKnown RBP3.36□□□□□ -1.87
HMGB1P49-201ENST00000418882 PSMB7Q99436 277 aa3.36□□□□□ -1.87
HMGB1P49-201ENST00000418882 IDI2Q9BXS1 227 aa3.36□□□□□ -1.87
HMGB1P49-201ENST00000418882 CXXC4Q9H2H0 198 aa3.36□□□□□ -1.87
HMGB1P49-201ENST00000418882 TMEM206Q9H813 350 aa3.36□□□□□ -1.87
HMGB1P49-201ENST00000418882 MARCH7Q9H992 704 aa3.36□□□□□ -1.87
HMGB1P49-201ENST00000418882 NMUR1Q9HB89 426 aa3.36□□□□□ -1.87
HMGB1P49-201ENST00000418882 OR1A2Q9Y585 309 aa3.36□□□□□ -1.87
HMGB1P49-201ENST00000418882 A0A0A6YYC8 382 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P49-201ENST00000418882 I3L1I5 382 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P49-201ENST00000418882 SYT7O43581 403 aa3.35□□□□□ -1.87
HMGB1P49-201ENST00000418882 ATP9AO75110 1047 aa3.35□□□□□ -1.87
HMGB1P49-201ENST00000418882 ZNF253O75346 499 aa3.35□□□□□ -1.87
HMGB1P49-201ENST00000418882 CSO75390 466 aaKnown RBP3.35□□□□□ -1.87
HMGB1P49-201ENST00000418882 GLCEO94923 617 aa3.35□□□□□ -1.87
HMGB1P49-201ENST00000418882 DNAH10OSP0CZ25 163 aa3.35□□□□□ -1.87
HMGB1P49-201ENST00000418882 GLRA1P23415 457 aa3.35□□□□□ -1.87
HMGB1P49-201ENST00000418882 SLC3A1Q07837 685 aa3.35□□□□□ -1.87
HMGB1P49-201ENST00000418882 ARHGAP1Q07960 439 aa3.35□□□□□ -1.87
HMGB1P49-201ENST00000418882 MFGE8Q08431 387 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P49-201ENST00000418882 ANKRD20A4Q4UJ75 823 aa3.35□□□□□ -1.87
HMGB1P49-201ENST00000418882 ANKRD20A8PQ5CZ79 823 aa3.35□□□□□ -1.87
HMGB1P49-201ENST00000418882 CCDC158Q5M9N0 1113 aa3.35□□□□□ -1.87
HMGB1P49-201ENST00000418882 ANKRD20A2Q5SQ80 823 aa3.35□□□□□ -1.87
HMGB1P49-201ENST00000418882 ANKRD20A1Q5TYW2 823 aa3.35□□□□□ -1.87
HMGB1P49-201ENST00000418882 ANKRD20A3Q5VUR7 823 aa3.35□□□□□ -1.87
HMGB1P49-201ENST00000418882 CAPN13Q6MZZ7 669 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P49-201ENST00000418882 HIPK1Q86Z02 1210 aa3.35□□□□□ -1.87
HMGB1P49-201ENST00000418882 TUSC5Q8IXB3 177 aa3.35□□□□□ -1.87
HMGB1P49-201ENST00000418882 ZNF781Q8N8C0 355 aa3.35□□□□□ -1.87
HMGB1P49-201ENST00000418882 ZNF491Q8N8L2 437 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms