RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 SLC34A3Q8N130 599 aa11.17□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 RAB42Q8N4Z0 105 aa11.17□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 CXorf40AQ8TE69 158 aa11.17□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 TFGQ92734 400 aaPredicted RBP11.17□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 CFHR5Q9BXR6 569 aa11.17□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 DPEP2Q9H4A9 486 aa11.17□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 NMNAT1Q9HAN9 279 aaPredicted RBP11.17□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 NEUROD4Q9HD90 331 aa11.17□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 TAC3Q9UHF0 121 aa11.17□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 IFT52Q9Y366 437 aa11.17□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 METTL15A6NJ78 407 aa11.16□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 K7ESM1 405 aa11.16□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 M0R082 166 aa11.16□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 RTCAO00442 366 aaKnown RBP11.16□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 CNR2P34972 360 aa11.16□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 RUNX1T1Q06455 604 aa11.16□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 C1DQ13901 141 aaKnown RBP11.16□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 AGAP7PQ5VUJ5 663 aa11.16□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 FRMPD2BQ6IN97 320 aa11.16□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 CLIP4Q8N3C7 705 aa11.16□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 ABHD8Q96I13 439 aa11.16□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 SEMA3GQ9NS98 782 aa11.16□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 ZNF226Q9NYT6 803 aa11.16□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 A8MVJ9 347 aa11.16□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 HIDE1A8MVS5 230 aa11.16□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 CCRL2O00421 344 aa11.16□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 SNPHO15079 494 aa11.16□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 SLC28A2O43868 658 aa11.16□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 TGM1P22735 817 aa11.16□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 SMIM11AP58511 58 aa11.16□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 RPS3AP61247 264 aaKnown RBP11.16□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 PDE7AQ13946 482 aa11.16□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 ZNF77Q15935 545 aa11.16□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 DUSP7Q16829 419 aa11.16□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 GRASPQ7Z6J2 395 aaPredicted RBP11.16□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 KRT73Q86Y46 540 aa11.16□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 DCUN1D3Q8IWE4 304 aa11.16□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 NATD1Q8N6N6 113 aa11.16□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 VN1R2Q8NFZ6 395 aa11.16□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 OR4C15Q8NGM1 316 aa11.16□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 OR5P2Q8WZ92 322 aa11.16□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 RAB8BQ92930 207 aa11.16□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 FAM83CQ9BQN1 747 aa11.16□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 UCK2Q9BZX2 261 aa11.16□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 RC3H2Q9HBD1 1191 aaKnown RBP11.16□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 CPNE5Q9HCH3 593 aa11.16□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 KLHL3Q9UH77 587 aa11.16□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 MYO7AQ13402 2215 aa11.16□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 TLR4O00206 839 aa11.16□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 SOX14O95416 240 aa11.16□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 CHMP24386 653 aa11.16□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 CTNNB1P35222 781 aa11.16□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 EIF2DP41214 584 aaKnown RBP11.16□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 TPTEP56180 551 aa11.16□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 TEKQ02763 1124 aa11.16□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 DEPDC1Q5TB30 811 aa11.16□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 CCDC80Q76M96 950 aa11.16□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 SLC9B2Q86UD5 537 aa11.16□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 RASSF5Q8WWW0 418 aa11.16□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 ZBED6CLQ96FA7 236 aaPredicted RBP11.16□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 SPNS1Q9H2V7 528 aa11.16□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 CRNNQ9UBG3 495 aaPredicted RBP11.16□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 TMEM98Q9Y2Y6 226 aa11.16□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 CFAP20Q9Y6A4 193 aaKnown RBP11.16□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 SCN8AQ9UQD0 1980 aa11.15□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 GASTP01350 101 aa11.15□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 NR2F1P10589 423 aa11.15□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 IRS1P35568 1242 aa11.15□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 KRT33BQ14525 404 aa11.15□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 CARTPTQ16568 116 aa11.15□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 RPS26P11Q5JNZ5 115 aaPredicted RBP11.15□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 NLRP8Q86W28 1048 aa11.15□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 NLGN4XQ8N0W4 816 aa11.15□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 OR5AR1Q8NGP9 310 aa11.15□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.15□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 XAGE5Q8WWM1 108 aa11.15□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 WDR34Q96EX3 536 aa11.15□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 TMEM19Q96HH6 336 aa11.15□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 F2RL3Q96RI0 385 aa11.15□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 POLR2J3Q9H1A7 115 aaKnown RBP11.15□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 CXorf36Q9H7Y0 433 aa11.15□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 CNOT2Q9NZN8 540 aaKnown RBP11.15□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 DEC1Q9P2X7 70 aa11.15□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 A3GALT2U3KPV4 340 aa11.15□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 C17orf113A0A1B0GUU1 675 aa11.15□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 TRIM43BA6NCK2 446 aa11.15□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 LOC110117498-PIK3R3F6TDL0 507 aa11.15□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 CAPN5O15484 640 aaPredicted RBP11.15□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 ASNA1O43681 348 aa11.15□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 UGT2B17O75795 530 aa11.15□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 ADAP00813 363 aa11.15□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 RB1P06400 928 aa11.15□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 H1F0P07305 194 aaKnown RBP11.15□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 DDCP20711 480 aa11.15□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 ERVFC1P60507 584 aa11.15□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 SOWAHCQ53LP3 525 aaPredicted RBP11.15□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 NCCRP1Q6ZVX7 275 aaPredicted RBP11.15□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 TSEN54Q7Z6J9 526 aaKnown RBP11.15□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 MMP21Q8N119 569 aa11.15□□□□□ -0.62
CSPG4P3Y-201ENST00000418188 OR8H2Q8N162 312 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms