RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 RUVBL2Q9Y230 463 aaKnown RBP3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 ARL2BPQ9Y2Y0 163 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 CKAP5Q14008 2032 aa3.68□□□□□ -1.82
HMGB3P20-201ENST00000417997 PCNTO95613 3336 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 A0A0G2JND7 137 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 A0A0U1RQS6 177 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 TSPAN11A1L157 253 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 C4orf47A7E2U8 309 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 TMEM114B3SHH9 223 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 SUPT3HB4E1H0 165 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 PRSS44E7EML9 344 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 H3BMM5 538 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 TRAFD1O14545 582 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 PRMT5O14744 637 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 KLF11O14901 512 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 DNPH1O43598 174 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 SNX3O60493 162 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 SYNCRIPO60506 623 aaKnown RBP3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 RNASEH1O60930 286 aaKnown RBP3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 NIPSNAP2O75323 286 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 SUPT3HO75486 399 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 ZNF821O75541 412 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 DCTN3O75935 186 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 KLHL2O95198 593 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 SERPINE1P05121 402 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 ACAA1P09110 424 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 RBP1P09455 135 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 CISD3P0C7P0 127 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 PRSS56P0CW18 603 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 CCDC166P0CW27 439 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 FGF3P11487 239 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 LAMP2P13473 410 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 HLA-EP13747 358 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 GFAPP14136 432 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 NPPBP16860 134 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 OPRD1P41143 372 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 PTGER3P43115 390 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 SLC1A6P48664 564 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 RGS4P49798 205 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 ENTPD1P49961 510 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 CDKN2DP55273 166 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 DCDC1P59894 354 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 ZBTB16Q05516 673 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 FCHO2Q0JRZ9 810 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 ELP6Q0PNE2 266 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 BST1Q10588 318 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 OVGP1Q12889 678 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 NFATC2Q13469 925 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 PEX6Q13608 980 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 GPR18Q14330 331 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 ELAVL3Q14576 367 aaKnown RBP3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 STARD3Q14849 445 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 CHRNA6Q15825 494 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 HNRNPA1L2Q32P51 320 aaKnown RBP3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 TTLL9Q3SXZ7 439 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 POM121L1PQ3SYA9 428 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 GPR33Q49SQ1 333 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 ZNF805Q5CZA5 627 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 ZNF789Q5FWF6 425 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 TECRLQ5HYJ1 363 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 ENTPD8Q5MY95 495 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 ASPHD1Q5U4P2 390 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 FAM46CQ5VWP2 391 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 TMEM215Q68D42 235 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 PARM1Q6UWI2 310 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 ZYG11AQ6WRX3 759 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 CCDC121Q6ZUS5 278 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 SH2D5Q6ZV89 423 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 FRA10AC1Q70Z53 315 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 DPPA4Q7L190 304 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 OTOAQ7RTW8 1153 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 MDGA2Q7Z553 956 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 SERPINA9Q86WD7 417 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 CACUL1Q86Y37 369 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 C10orf107Q8IVU9 208 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 CEP97Q8IW35 865 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 SUGP1Q8IWZ8 645 aaKnown RBP3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 SYTL1Q8IYJ3 562 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 NRSN1Q8IZ57 195 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 NKAPQ8N5F7 415 aaKnown RBP3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 IQCF1Q8N6M8 205 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 CCNYL1Q8N7R7 359 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 KDM1BQ8NB78 822 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 ACVR1CQ8NER5 493 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 CXorf40AQ8TE69 158 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 HEXDCQ8WVB3 486 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 LPGAT1Q92604 370 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 FGF14Q92915 247 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 NXNL1Q96CM4 212 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 SGF29Q96ES7 293 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 LINGO1Q96FE5 620 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 SCRN2Q96FV2 425 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 DCUN1D1Q96GG9 259 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 MED30Q96HR3 178 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 C7orf26Q96N11 449 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 PANX3Q96QZ0 392 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 LYSMD1Q96S90 227 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 GPR21Q99679 349 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 OMDQ99983 421 aa3.67□□□□□ -1.82
HMGB3P20-201ENST00000417997 C19orf43Q9BQ61 176 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms