RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 KCMF1Q9P0J7 381 aa14.32□□□□□ -0.12
NUP50-204ENST00000417702 SLC5A6Q9Y289 635 aa14.32□□□□□ -0.12
NUP50-204ENST00000417702 PCDHGB6Q9Y5F9 930 aa14.32□□□□□ -0.12
NUP50-204ENST00000417702 DIDO1Q9BTC0 2240 aaKnown RBP14.31□□□□□ -0.12
NUP50-204ENST00000417702 TRBV11-1A0A0K0K1C0 115 aa14.31□□□□□ -0.12
NUP50-204ENST00000417702 FCHO1O14526 889 aa14.31□□□□□ -0.12
NUP50-204ENST00000417702 RIPK2O43353 540 aa14.31□□□□□ -0.12
NUP50-204ENST00000417702 CLDN9O95484 217 aa14.31□□□□□ -0.12
NUP50-204ENST00000417702 CPN2P22792 545 aa14.31□□□□□ -0.12
NUP50-204ENST00000417702 CCNG1P51959 295 aa14.31□□□□□ -0.12
NUP50-204ENST00000417702 MLF1P58340 268 aa14.31□□□□□ -0.12
NUP50-204ENST00000417702 SLAMF1Q13291 335 aa14.31□□□□□ -0.12
NUP50-204ENST00000417702 SERTAD2Q14140 314 aa14.31□□□□□ -0.12
NUP50-204ENST00000417702 ELAVL1Q15717 326 aaKnown RBP14.31□□□□□ -0.12
NUP50-204ENST00000417702 ZNF324BQ6AW86 544 aaPredicted RBP14.31□□□□□ -0.12
NUP50-204ENST00000417702 SPINK14Q6IE38 97 aa14.31□□□□□ -0.12
NUP50-204ENST00000417702 CNPY4Q8N129 248 aa14.31□□□□□ -0.12
NUP50-204ENST00000417702 TMEM132CQ8N3T6 1108 aa14.31□□□□□ -0.12
NUP50-204ENST00000417702 L3MBTL4Q8NA19 623 aa14.31□□□□□ -0.12
NUP50-204ENST00000417702 TMEM178AQ8NBL3 297 aa14.31□□□□□ -0.12
NUP50-204ENST00000417702 MDS2Q8NDY4 140 aa14.31□□□□□ -0.12
NUP50-204ENST00000417702 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.31□□□□□ -0.12
NUP50-204ENST00000417702 VMP1Q96GC9 406 aa14.31□□□□□ -0.12
NUP50-204ENST00000417702 SIGLEC12Q96PQ1 595 aa14.31□□□□□ -0.12
NUP50-204ENST00000417702 PSMG3-AS1Q96PY0 264 aa14.31□□□□□ -0.12
NUP50-204ENST00000417702 MAPKAP1Q9BPZ7 522 aa14.31□□□□□ -0.12
NUP50-204ENST00000417702 CCDC77Q9BR77 488 aa14.31□□□□□ -0.12
NUP50-204ENST00000417702 ALOXE3Q9BYJ1 711 aa14.31□□□□□ -0.12
NUP50-204ENST00000417702 KLHL1Q9NR64 748 aa14.31□□□□□ -0.12
NUP50-204ENST00000417702 MS4A12Q9NXJ0 267 aa14.31□□□□□ -0.12
NUP50-204ENST00000417702 LRFN1Q9P244 771 aa14.31□□□□□ -0.12
NUP50-204ENST00000417702 FBXW2Q9UKT8 454 aa14.31□□□□□ -0.12
NUP50-204ENST00000417702 PPIEQ9UNP9 301 aaKnown RBP14.31□□□□□ -0.12
NUP50-204ENST00000417702 RNF11Q9Y3C5 154 aa14.31□□□□□ -0.12
NUP50-204ENST00000417702 CLDN16Q9Y5I7 305 aa14.31□□□□□ -0.12
NUP50-204ENST00000417702 CLCA3PQ9Y6N3 262 aa14.31□□□□□ -0.12
NUP50-204ENST00000417702 IQANK1A0A1B0GTG1 560 aa14.3□□□□□ -0.12
NUP50-204ENST00000417702 TGFBR3LH3BV60 316 aa14.3□□□□□ -0.12
NUP50-204ENST00000417702 GP1BBP13224 206 aa14.3□□□□□ -0.12
NUP50-204ENST00000417702 TNNI3P19429 210 aa14.3□□□□□ -0.12
NUP50-204ENST00000417702 TNFRSF8P28908 595 aa14.3□□□□□ -0.12
NUP50-204ENST00000417702 TPP2P29144 1249 aaPredicted RBP14.3□□□□□ -0.12
NUP50-204ENST00000417702 PPP2R1BP30154 601 aa14.3□□□□□ -0.12
NUP50-204ENST00000417702 TLX1P31314 330 aaPredicted RBP14.3□□□□□ -0.12
NUP50-204ENST00000417702 CYB561P49447 251 aa14.3□□□□□ -0.12
NUP50-204ENST00000417702 ST13P50502 369 aaKnown RBP14.3□□□□□ -0.12
NUP50-204ENST00000417702 ARFIP1P53367 373 aa14.3□□□□□ -0.12
NUP50-204ENST00000417702 RPS13P62277 151 aaKnown RBP14.3□□□□□ -0.12
NUP50-204ENST00000417702 ZRSR2Q15696 482 aaKnown RBP14.3□□□□□ -0.12
NUP50-204ENST00000417702 ADGRD1Q6QNK2 874 aa14.3□□□□□ -0.12
NUP50-204ENST00000417702 TIFABQ6ZNK6 161 aa14.3□□□□□ -0.12
NUP50-204ENST00000417702 RNF175Q8N4F7 328 aa14.3□□□□□ -0.12
NUP50-204ENST00000417702 FAM98AQ8NCA5 519 aaKnown RBP14.3□□□□□ -0.12
NUP50-204ENST00000417702 APCDD1LQ8NCL9 501 aa14.3□□□□□ -0.12
NUP50-204ENST00000417702 DAZLQ92904 295 aaKnown RBP14.3□□□□□ -0.12
NUP50-204ENST00000417702 NCLNQ969V3 563 aa14.3□□□□□ -0.12
NUP50-204ENST00000417702 SORBS1Q9BX66 1292 aaKnown RBP14.3□□□□□ -0.12
NUP50-204ENST00000417702 VTI1BQ9UEU0 232 aa14.3□□□□□ -0.12
NUP50-204ENST00000417702 PHF11Q9UIL8 331 aa14.3□□□□□ -0.12
NUP50-204ENST00000417702 ERRFI1Q9UJM3 462 aaPredicted RBP14.3□□□□□ -0.12
NUP50-204ENST00000417702 PCTPQ9UKL6 214 aa14.3□□□□□ -0.12
NUP50-204ENST00000417702 OSGIN2Q9Y236 505 aa14.3□□□□□ -0.12
NUP50-204ENST00000417702 FOXE1O00358 373 aaPredicted RBP14.29□□□□□ -0.12
NUP50-204ENST00000417702 PLPP1O14494 284 aa14.29□□□□□ -0.12
NUP50-204ENST00000417702 OR7A17O14581 309 aa14.29□□□□□ -0.12
NUP50-204ENST00000417702 LDB3O75112 727 aa14.29□□□□□ -0.12
NUP50-204ENST00000417702 ZFAND5O76080 213 aa14.29□□□□□ -0.12
NUP50-204ENST00000417702 SP1P08047 785 aa14.29□□□□□ -0.12
NUP50-204ENST00000417702 FAM153BP0C7A2 387 aa14.29□□□□□ -0.12
NUP50-204ENST00000417702 CUL3Q13618 768 aa14.29□□□□□ -0.12
NUP50-204ENST00000417702 SLC29A2Q14542 456 aa14.29□□□□□ -0.12
NUP50-204ENST00000417702 FAM153CQ494X1 144 aa14.29□□□□□ -0.12
NUP50-204ENST00000417702 TTC19Q6DKK2 380 aaPredicted RBP14.29□□□□□ -0.12
NUP50-204ENST00000417702 SLC25A25Q6KCM7 469 aa14.29□□□□□ -0.12
NUP50-204ENST00000417702 GFRALQ6UXV0 394 aa14.29□□□□□ -0.12
NUP50-204ENST00000417702 GPR180Q86V85 440 aa14.29□□□□□ -0.12
NUP50-204ENST00000417702 LCA5Q86VQ0 697 aa14.29□□□□□ -0.12
NUP50-204ENST00000417702 ZCCHC7Q8N3Z6 543 aaKnown RBP14.29□□□□□ -0.12
NUP50-204ENST00000417702 OR52B6Q8NGF0 335 aa14.29□□□□□ -0.12
NUP50-204ENST00000417702 OR14A16Q8NHC5 309 aa14.29□□□□□ -0.12
NUP50-204ENST00000417702 THAP3Q8WTV1 239 aaPredicted RBP14.29□□□□□ -0.12
NUP50-204ENST00000417702 TMEM125Q96AQ2 219 aa14.29□□□□□ -0.12
NUP50-204ENST00000417702 SCMH1Q96GD3 660 aa14.29□□□□□ -0.12
NUP50-204ENST00000417702 CDK15Q96Q40 435 aa14.29□□□□□ -0.12
NUP50-204ENST00000417702 SERPINI1Q99574 410 aa14.29□□□□□ -0.12
NUP50-204ENST00000417702 NTMT1Q9BV86 223 aa14.29□□□□□ -0.12
NUP50-204ENST00000417702 ANKZF1Q9H8Y5 726 aa14.29□□□□□ -0.12
NUP50-204ENST00000417702 PSD3Q9NYI0 1048 aa14.29□□□□□ -0.12
NUP50-204ENST00000417702 COL12A1Q99715 3063 aa14.28□□□□□ -0.12
NUP50-204ENST00000417702 SPENQ96T58 3664 aaKnown RBP14.28□□□□□ -0.12
NUP50-204ENST00000417702 MYOCOSA0A1B0GUC4 107 aa14.28□□□□□ -0.12
NUP50-204ENST00000417702 SLC25A12O75746 678 aa14.28□□□□□ -0.12
NUP50-204ENST00000417702 NEURL1O76050 574 aa14.28□□□□□ -0.12
NUP50-204ENST00000417702 MLYCDO95822 493 aa14.28□□□□□ -0.12
NUP50-204ENST00000417702 COX7A2P14406 83 aa14.28□□□□□ -0.12
NUP50-204ENST00000417702 TAC1P20366 129 aa14.28□□□□□ -0.12
NUP50-204ENST00000417702 GCAP28676 217 aa14.28□□□□□ -0.12
NUP50-204ENST00000417702 TRHRP34981 398 aaPredicted RBP14.28□□□□□ -0.12
NUP50-204ENST00000417702 BUD31P41223 144 aaPredicted RBP14.28□□□□□ -0.12
NUP50-204ENST00000417702 HLCSP50747 726 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms