RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 LIMK1P53667 647 aa13.81□□□□□ -0.2
HDAC9-208ENST00000417496 CRISP1P54107 249 aa13.81□□□□□ -0.2
HDAC9-208ENST00000417496 CDC42P60953 191 aa13.81□□□□□ -0.2
HDAC9-208ENST00000417496 RBBP4Q09028 425 aa13.81□□□□□ -0.2
HDAC9-208ENST00000417496 E2F2Q14209 437 aa13.81□□□□□ -0.2
HDAC9-208ENST00000417496 SSX1Q16384 188 aa13.81□□□□□ -0.2
HDAC9-208ENST00000417496 ZNF630Q2M218 657 aaPredicted RBP13.81□□□□□ -0.2
HDAC9-208ENST00000417496 ZNF658BQ4V348 819 aaPredicted RBP13.81□□□□□ -0.2
HDAC9-208ENST00000417496 HIST2H2AA3Q6FI13 130 aa13.81□□□□□ -0.2
HDAC9-208ENST00000417496 ATCAYQ86WG3 371 aa13.81□□□□□ -0.2
HDAC9-208ENST00000417496 LSRQ86X29 649 aaPredicted RBP13.81□□□□□ -0.2
HDAC9-208ENST00000417496 ING5Q8WYH8 240 aa13.81□□□□□ -0.2
HDAC9-208ENST00000417496 EFCAB11Q9BUY7 163 aa13.81□□□□□ -0.2
HDAC9-208ENST00000417496 SGPP1Q9BX95 441 aa13.81□□□□□ -0.2
HDAC9-208ENST00000417496 ZDHHC4Q9NPG8 344 aa13.81□□□□□ -0.2
HDAC9-208ENST00000417496 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.81□□□□□ -0.2
HDAC9-208ENST00000417496 DNAJC27Q9NZQ0 273 aa13.81□□□□□ -0.2
HDAC9-208ENST00000417496 FTSJ1Q9UET6 329 aa13.81□□□□□ -0.2
HDAC9-208ENST00000417496 WASHC1A8K0Z3 465 aa13.8□□□□□ -0.2
HDAC9-208ENST00000417496 TAF4O00268 1085 aa13.8□□□□□ -0.2
HDAC9-208ENST00000417496 LILRB5O75023 590 aa13.8□□□□□ -0.2
HDAC9-208ENST00000417496 GPX5O75715 221 aa13.8□□□□□ -0.2
HDAC9-208ENST00000417496 CYP7B1O75881 506 aa13.8□□□□□ -0.2
HDAC9-208ENST00000417496 IFNW1P05000 195 aa13.8□□□□□ -0.2
HDAC9-208ENST00000417496 ARAFP10398 606 aa13.8□□□□□ -0.2
HDAC9-208ENST00000417496 PTGER1P34995 402 aa13.8□□□□□ -0.2
HDAC9-208ENST00000417496 DSTNP60981 165 aa13.8□□□□□ -0.2
HDAC9-208ENST00000417496 HSPB3Q12988 150 aa13.8□□□□□ -0.2
HDAC9-208ENST00000417496 ZNF181Q2M3W8 571 aa13.8□□□□□ -0.2
HDAC9-208ENST00000417496 ATAD3BQ5T9A4 648 aa13.8□□□□□ -0.2
HDAC9-208ENST00000417496 ZNF697Q5TEC3 545 aa13.8□□□□□ -0.2
HDAC9-208ENST00000417496 RAET1GQ6H3X3 334 aa13.8□□□□□ -0.2
HDAC9-208ENST00000417496 WASH2PQ6VEQ5 465 aa13.8□□□□□ -0.2
HDAC9-208ENST00000417496 FAM83HQ6ZRV2 1179 aaPredicted RBP13.8□□□□□ -0.2
HDAC9-208ENST00000417496 CCDC80Q76M96 950 aa13.8□□□□□ -0.2
HDAC9-208ENST00000417496 GDPD3Q7L5L3 318 aa13.8□□□□□ -0.2
HDAC9-208ENST00000417496 NLRP8Q86W28 1048 aa13.8□□□□□ -0.2
HDAC9-208ENST00000417496 LACC1Q8IV20 430 aa13.8□□□□□ -0.2
HDAC9-208ENST00000417496 LRRC56Q8IYG6 542 aaPredicted RBP13.8□□□□□ -0.2
HDAC9-208ENST00000417496 ADGRF3Q8IZF5 1079 aa13.8□□□□□ -0.2
HDAC9-208ENST00000417496 CELF2-AS1Q8N7Q2 184 aa13.8□□□□□ -0.2
HDAC9-208ENST00000417496 Q8N9G6 341 aaPredicted RBP13.8□□□□□ -0.2
HDAC9-208ENST00000417496 KBTBD8Q8NFY9 601 aa13.8□□□□□ -0.2
HDAC9-208ENST00000417496 OR5AR1Q8NGP9 310 aa13.8□□□□□ -0.2
HDAC9-208ENST00000417496 ZNF296Q8WUU4 475 aaPredicted RBP13.8□□□□□ -0.2
HDAC9-208ENST00000417496 CXorf40BQ96DE9 158 aa13.8□□□□□ -0.2
HDAC9-208ENST00000417496 OTUB1Q96FW1 271 aaPredicted RBP13.8□□□□□ -0.2
HDAC9-208ENST00000417496 MYNNQ9NPC7 610 aa13.8□□□□□ -0.2
HDAC9-208ENST00000417496 EXOSC4Q9NPD3 245 aaKnown RBP13.8□□□□□ -0.2
HDAC9-208ENST00000417496 TMEM98Q9Y2Y6 226 aa13.8□□□□□ -0.2
HDAC9-208ENST00000417496 ANTXRLA6NF34 631 aa13.8□□□□□ -0.2
HDAC9-208ENST00000417496 ZAR1LA6NP61 321 aa13.8□□□□□ -0.2
HDAC9-208ENST00000417496 SPINT1O43278 529 aa13.8□□□□□ -0.2
HDAC9-208ENST00000417496 MMP20O60882 483 aa13.8□□□□□ -0.2
HDAC9-208ENST00000417496 POP7O75817 140 aaKnown RBP13.8□□□□□ -0.2
HDAC9-208ENST00000417496 TBX6O95947 436 aaPredicted RBP13.8□□□□□ -0.2
HDAC9-208ENST00000417496 RCVRNP35243 200 aa13.8□□□□□ -0.2
HDAC9-208ENST00000417496 HOXD12P35452 270 aa13.8□□□□□ -0.2
HDAC9-208ENST00000417496 HMGA2P52926 109 aa13.8□□□□□ -0.2
HDAC9-208ENST00000417496 ERVFC1P60507 584 aa13.8□□□□□ -0.2
HDAC9-208ENST00000417496 LSM11P83369 360 aaKnown RBP eCLIP13.8□□□□□ -0.2
HDAC9-208ENST00000417496 FBXO43Q4G163 708 aa13.8□□□□□ -0.2
HDAC9-208ENST00000417496 TCEAL5Q5H9L2 206 aa13.8□□□□□ -0.2
HDAC9-208ENST00000417496 ZNF770Q6IQ21 691 aaPredicted RBP13.8□□□□□ -0.2
HDAC9-208ENST00000417496 TMIGD1Q6UXZ0 262 aa13.8□□□□□ -0.2
HDAC9-208ENST00000417496 ANKRD33Q7Z3H0 272 aa13.8□□□□□ -0.2
HDAC9-208ENST00000417496 KLHDC8AQ8IYD2 350 aa13.8□□□□□ -0.2
HDAC9-208ENST00000417496 GPR32P1Q8NGA4 272 aa13.8□□□□□ -0.2
HDAC9-208ENST00000417496 SLC35B4Q969S0 331 aa13.8□□□□□ -0.2
HDAC9-208ENST00000417496 F2RL3Q96RI0 385 aa13.8□□□□□ -0.2
HDAC9-208ENST00000417496 CNPPD1Q9BV87 410 aa13.8□□□□□ -0.2
HDAC9-208ENST00000417496 NXF2Q9GZY0 626 aaKnown RBP13.8□□□□□ -0.2
HDAC9-208ENST00000417496 RNF208Q9H0X6 261 aa13.8□□□□□ -0.2
HDAC9-208ENST00000417496 GPBP1L1Q9HC44 474 aaPredicted RBP13.8□□□□□ -0.2
HDAC9-208ENST00000417496 CPNE5Q9HCH3 593 aa13.8□□□□□ -0.2
HDAC9-208ENST00000417496 ASF1AQ9Y294 204 aa13.8□□□□□ -0.2
HDAC9-208ENST00000417496 PCDHGB6Q9Y5F9 930 aa13.8□□□□□ -0.2
HDAC9-208ENST00000417496 FEZF1A0PJY2 475 aa13.79□□□□□ -0.2
HDAC9-208ENST00000417496 KMOO15229 486 aa13.79□□□□□ -0.2
HDAC9-208ENST00000417496 B4GALT2O60909 372 aa13.79□□□□□ -0.2
HDAC9-208ENST00000417496 CHRM5P08912 532 aaPredicted RBP13.79□□□□□ -0.2
HDAC9-208ENST00000417496 GSTT2P0CG29 244 aa13.79□□□□□ -0.2
HDAC9-208ENST00000417496 GSTT2BP0CG30 244 aa13.79□□□□□ -0.2
HDAC9-208ENST00000417496 RHCEP18577 417 aa13.79□□□□□ -0.2
HDAC9-208ENST00000417496 PNLIPRP1P54315 467 aa13.79□□□□□ -0.2
HDAC9-208ENST00000417496 CDC20Q12834 499 aa13.79□□□□□ -0.2
HDAC9-208ENST00000417496 CNTN1Q12860 1018 aa13.79□□□□□ -0.2
HDAC9-208ENST00000417496 ERAP2Q6P179 960 aa13.79□□□□□ -0.2
HDAC9-208ENST00000417496 PNCKQ6P2M8 343 aa13.79□□□□□ -0.2
HDAC9-208ENST00000417496 CCBE1Q6UXH8 406 aaPredicted RBP13.79□□□□□ -0.2
HDAC9-208ENST00000417496 DEF8Q6ZN54 512 aa13.79□□□□□ -0.2
HDAC9-208ENST00000417496 CCDC149Q6ZUS6 474 aa13.79□□□□□ -0.2
HDAC9-208ENST00000417496 C12orf40Q86WS4 652 aa13.79□□□□□ -0.2
HDAC9-208ENST00000417496 SLC7A5P1Q8MH63 180 aa13.79□□□□□ -0.2
HDAC9-208ENST00000417496 OR4D11Q8NGI4 311 aa13.79□□□□□ -0.2
HDAC9-208ENST00000417496 LRRC3BQ96PB8 259 aa13.79□□□□□ -0.2
HDAC9-208ENST00000417496 NUAK2Q9H093 628 aa13.79□□□□□ -0.2
HDAC9-208ENST00000417496 RERGLQ9H628 205 aa13.79□□□□□ -0.2
HDAC9-208ENST00000417496 SP140LQ9H930 580 aa13.79□□□□□ -0.2
HDAC9-208ENST00000417496 SIAEQ9HAT2 523 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms