RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 GALR3O60755 368 aaPredicted RBP12.04□□□□□ -0.48
LINC00339-202ENST00000416769 SERPIND1P05546 499 aa12.04□□□□□ -0.48
LINC00339-202ENST00000416769 GSTA1P08263 222 aa12.04□□□□□ -0.48
LINC00339-202ENST00000416769 LTA4HP09960 611 aaKnown RBP12.04□□□□□ -0.48
LINC00339-202ENST00000416769 PYGBP11216 843 aa12.04□□□□□ -0.48
LINC00339-202ENST00000416769 NPPBP16860 134 aa12.04□□□□□ -0.48
LINC00339-202ENST00000416769 ART1P52961 327 aa12.04□□□□□ -0.48
LINC00339-202ENST00000416769 ATP6V0D1P61421 351 aa12.04□□□□□ -0.48
LINC00339-202ENST00000416769 FAM83EQ2M2I3 478 aa12.04□□□□□ -0.48
LINC00339-202ENST00000416769 C17orf64Q86WR6 236 aa12.04□□□□□ -0.48
LINC00339-202ENST00000416769 MYO1HQ8N1T3 1032 aa12.04□□□□□ -0.48
LINC00339-202ENST00000416769 MCOLN3Q8TDD5 553 aa12.04□□□□□ -0.48
LINC00339-202ENST00000416769 TBC1D20Q96BZ9 403 aa12.04□□□□□ -0.48
LINC00339-202ENST00000416769 LINGO1Q96FE5 620 aa12.04□□□□□ -0.48
LINC00339-202ENST00000416769 PTCHD1Q96NR3 888 aa12.04□□□□□ -0.48
LINC00339-202ENST00000416769 SH3GL2Q99962 352 aa12.04□□□□□ -0.48
LINC00339-202ENST00000416769 SGPP1Q9BX95 441 aa12.04□□□□□ -0.48
LINC00339-202ENST00000416769 RHBGQ9H310 441 aa12.04□□□□□ -0.48
LINC00339-202ENST00000416769 KLHL31Q9H511 634 aa12.04□□□□□ -0.48
LINC00339-202ENST00000416769 NMRAL1Q9HBL8 299 aa12.04□□□□□ -0.48
LINC00339-202ENST00000416769 DEPPQ9NTK1 212 aa12.04□□□□□ -0.48
LINC00339-202ENST00000416769 TNFRSF10DQ9UBN6 386 aa12.04□□□□□ -0.48
LINC00339-202ENST00000416769 ACTL7BQ9Y614 415 aa12.04□□□□□ -0.48
LINC00339-202ENST00000416769 PHF3Q92576 2039 aaKnown RBP12.04□□□□□ -0.48
LINC00339-202ENST00000416769 ANKHD1Q8IWZ3 2542 aaKnown RBP12.03□□□□□ -0.48
LINC00339-202ENST00000416769 IGKV3D-11A0A0A0MRZ8 115 aa12.03□□□□□ -0.48
LINC00339-202ENST00000416769 FOXO6A8MYZ6 492 aa12.03□□□□□ -0.48
LINC00339-202ENST00000416769 G3V3Y1 287 aa12.03□□□□□ -0.48
LINC00339-202ENST00000416769 TGFBR3LH3BV60 316 aa12.03□□□□□ -0.48
LINC00339-202ENST00000416769 OR1F1O43749 312 aa12.03□□□□□ -0.48
LINC00339-202ENST00000416769 TOXO94900 526 aa12.03□□□□□ -0.48
LINC00339-202ENST00000416769 C8GP07360 202 aa12.03□□□□□ -0.48
LINC00339-202ENST00000416769 CYC1P08574 325 aa12.03□□□□□ -0.48
LINC00339-202ENST00000416769 CD1DP15813 335 aa12.03□□□□□ -0.48
LINC00339-202ENST00000416769 KRT4P19013 534 aa12.03□□□□□ -0.48
LINC00339-202ENST00000416769 CAPN3P20807 821 aa12.03□□□□□ -0.48
LINC00339-202ENST00000416769 PTGS2P35354 604 aa12.03□□□□□ -0.48
LINC00339-202ENST00000416769 CCT5P48643 541 aa12.03□□□□□ -0.48
LINC00339-202ENST00000416769 CYB561P49447 251 aa12.03□□□□□ -0.48
LINC00339-202ENST00000416769 TAS2R50P59544 299 aa12.03□□□□□ -0.48
LINC00339-202ENST00000416769 RAB8AP61006 207 aa12.03□□□□□ -0.48
LINC00339-202ENST00000416769 DLG1Q12959 904 aa12.03□□□□□ -0.48
LINC00339-202ENST00000416769 CSHL1Q14406 222 aa12.03□□□□□ -0.48
LINC00339-202ENST00000416769 ACAP2Q15057 778 aa12.03□□□□□ -0.48
LINC00339-202ENST00000416769 TSNAXIP1Q2TAA8 658 aa12.03□□□□□ -0.48
LINC00339-202ENST00000416769 EXOC3L1Q86VI1 746 aa12.03□□□□□ -0.48
LINC00339-202ENST00000416769 CENPLQ8N0S6 344 aaPredicted RBP12.03□□□□□ -0.48
LINC00339-202ENST00000416769 PLD6Q8N2A8 252 aaKnown RBP12.03□□□□□ -0.48
LINC00339-202ENST00000416769 GOLGA6L1Q8N7Z2 621 aa12.03□□□□□ -0.48
LINC00339-202ENST00000416769 NXNL1Q96CM4 212 aa12.03□□□□□ -0.48
LINC00339-202ENST00000416769 TSNARE1Q96NA8 513 aa12.03□□□□□ -0.48
LINC00339-202ENST00000416769 OR1F2PQ96R84 312 aa12.03□□□□□ -0.48
LINC00339-202ENST00000416769 DEFB127Q9H1M4 99 aa12.03□□□□□ -0.48
LINC00339-202ENST00000416769 LIME1Q9H400 295 aa12.03□□□□□ -0.48
LINC00339-202ENST00000416769 TRIM45Q9H8W5 580 aaPredicted RBP12.03□□□□□ -0.48
LINC00339-202ENST00000416769 IGSF5Q9NSI5 407 aa12.03□□□□□ -0.48
LINC00339-202ENST00000416769 LIPGQ9Y5X9 500 aa12.03□□□□□ -0.48
LINC00339-202ENST00000416769 SLC22A7Q9Y694 548 aa12.03□□□□□ -0.48
LINC00339-202ENST00000416769 A0A0G2JN53 185 aa12.02□□□□□ -0.49
LINC00339-202ENST00000416769 TRBV11-1A0A0K0K1C0 115 aa12.02□□□□□ -0.49
LINC00339-202ENST00000416769 MYOCOSA0A1B0GUC4 107 aa12.02□□□□□ -0.49
LINC00339-202ENST00000416769 SAGE2PA6NJ88 616 aa12.02□□□□□ -0.49
LINC00339-202ENST00000416769 GOLGA8RI6L899 631 aa12.02□□□□□ -0.49
LINC00339-202ENST00000416769 PEX1O43933 1283 aa12.02□□□□□ -0.49
LINC00339-202ENST00000416769 NADKO95544 446 aaPredicted RBP12.02□□□□□ -0.49
LINC00339-202ENST00000416769 ALOX12P18054 663 aa12.02□□□□□ -0.49
LINC00339-202ENST00000416769 TFEBP19484 476 aa12.02□□□□□ -0.49
LINC00339-202ENST00000416769 CRHR1P34998 444 aa12.02□□□□□ -0.49
LINC00339-202ENST00000416769 HLCSP50747 726 aa12.02□□□□□ -0.49
LINC00339-202ENST00000416769 HNRNPFP52597 415 aaKnown RBP12.02□□□□□ -0.49
LINC00339-202ENST00000416769 NUP107P57740 925 aa12.02□□□□□ -0.49
LINC00339-202ENST00000416769 IRF9Q00978 393 aa12.02□□□□□ -0.49
LINC00339-202ENST00000416769 KLC3Q6P597 504 aa12.02□□□□□ -0.49
LINC00339-202ENST00000416769 LCTLQ6UWM7 567 aa12.02□□□□□ -0.49
LINC00339-202ENST00000416769 ISCA2Q86U28 154 aa12.02□□□□□ -0.49
LINC00339-202ENST00000416769 LGI4Q8N135 537 aa12.02□□□□□ -0.49
LINC00339-202ENST00000416769 BANPQ8N9N5 519 aa12.02□□□□□ -0.49
LINC00339-202ENST00000416769 ANKRD53Q8N9V6 530 aa12.02□□□□□ -0.49
LINC00339-202ENST00000416769 FAM98AQ8NCA5 519 aaKnown RBP12.02□□□□□ -0.49
LINC00339-202ENST00000416769 APCDD1LQ8NCL9 501 aa12.02□□□□□ -0.49
LINC00339-202ENST00000416769 TMEM52Q8NDY8 209 aa12.02□□□□□ -0.49
LINC00339-202ENST00000416769 RHEBL1Q8TAI7 183 aa12.02□□□□□ -0.49
LINC00339-202ENST00000416769 KCTD4Q8WVF5 259 aa12.02□□□□□ -0.49
LINC00339-202ENST00000416769 KIAA1191Q96A73 305 aa12.02□□□□□ -0.49
LINC00339-202ENST00000416769 ARL8AQ96BM9 186 aa12.02□□□□□ -0.49
LINC00339-202ENST00000416769 ZBTB9Q96C00 473 aa12.02□□□□□ -0.49
LINC00339-202ENST00000416769 TLCD1Q96CP7 247 aa12.02□□□□□ -0.49
LINC00339-202ENST00000416769 THAP11Q96EK4 314 aa12.02□□□□□ -0.49
LINC00339-202ENST00000416769 SEC16BQ96JE7 1060 aa12.02□□□□□ -0.49
LINC00339-202ENST00000416769 GPR78Q96P69 363 aa12.02□□□□□ -0.49
LINC00339-202ENST00000416769 SMC6Q96SB8 1091 aa12.02□□□□□ -0.49
LINC00339-202ENST00000416769 SSU72Q9NP77 194 aaKnown RBP12.02□□□□□ -0.49
LINC00339-202ENST00000416769 MKS1Q9NXB0 559 aa12.02□□□□□ -0.49
LINC00339-202ENST00000416769 GRID1Q9ULK0 1009 aa12.02□□□□□ -0.49
LINC00339-202ENST00000416769 CLDN16Q9Y5I7 305 aa12.02□□□□□ -0.49
LINC00339-202ENST00000416769 MAP1AP78559 2803 aaPredicted RBP12.01□□□□□ -0.49
LINC00339-202ENST00000416769 DNHD1Q96M86 4753 aa12.01□□□□□ -0.49
LINC00339-202ENST00000416769 TCRBV16S1A1N1A0A5B0 115 aa12.01□□□□□ -0.49
LINC00339-202ENST00000416769 FAM166BA8MTA8 275 aa12.01□□□□□ -0.49
LINC00339-202ENST00000416769 CDC7O00311 574 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms