RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 LHX1P48742 406 aa14.08□□□□□ -0.16
NCKIPSD-204ENST00000416649 CLCN4P51793 760 aa14.08□□□□□ -0.16
NCKIPSD-204ENST00000416649 CTBP2P56545 445 aa14.08□□□□□ -0.16
NCKIPSD-204ENST00000416649 SEMG2Q02383 582 aa14.08□□□□□ -0.16
NCKIPSD-204ENST00000416649 CLLU1OSQ5K130 101 aa14.08□□□□□ -0.16
NCKIPSD-204ENST00000416649 AFMIDQ63HM1 303 aa14.08□□□□□ -0.16
NCKIPSD-204ENST00000416649 PTRHD1Q6GMV3 140 aaKnown RBP14.08□□□□□ -0.16
NCKIPSD-204ENST00000416649 GLB1LQ6UWU2 654 aa14.08□□□□□ -0.16
NCKIPSD-204ENST00000416649 TAGAPQ8N103 731 aa14.08□□□□□ -0.16
NCKIPSD-204ENST00000416649 FAM181AQ8N9Y4 354 aa14.08□□□□□ -0.16
NCKIPSD-204ENST00000416649 LILRB1Q8NHL6 650 aaPredicted RBP14.08□□□□□ -0.16
NCKIPSD-204ENST00000416649 DNAJB8Q8NHS0 232 aa14.08□□□□□ -0.16
NCKIPSD-204ENST00000416649 LINC01599Q8WXQ3 324 aa14.08□□□□□ -0.16
NCKIPSD-204ENST00000416649 TCF25Q9BQ70 676 aa14.08□□□□□ -0.16
NCKIPSD-204ENST00000416649 CD244Q9BZW8 370 aa14.08□□□□□ -0.16
NCKIPSD-204ENST00000416649 TPT1P8Q9HAU6 139 aa14.08□□□□□ -0.16
NCKIPSD-204ENST00000416649 LATS2Q9NRM7 1088 aa14.08□□□□□ -0.16
NCKIPSD-204ENST00000416649 SNX11Q9Y5W9 270 aa14.08□□□□□ -0.16
NCKIPSD-204ENST00000416649 TEX46H3BTG2 121 aa14.07□□□□□ -0.16
NCKIPSD-204ENST00000416649 BET1O15155 118 aa14.07□□□□□ -0.16
NCKIPSD-204ENST00000416649 RAMP2O60895 175 aa14.07□□□□□ -0.16
NCKIPSD-204ENST00000416649 SLC43A1O75387 559 aa14.07□□□□□ -0.16
NCKIPSD-204ENST00000416649 PPM1BO75688 479 aa14.07□□□□□ -0.16
NCKIPSD-204ENST00000416649 NCR1O76036 304 aa14.07□□□□□ -0.16
NCKIPSD-204ENST00000416649 IGFBP1P08833 259 aaPredicted RBP14.07□□□□□ -0.16
NCKIPSD-204ENST00000416649 COX7A2P14406 83 aa14.07□□□□□ -0.16
NCKIPSD-204ENST00000416649 EPB42P16452 691 aa14.07□□□□□ -0.16
NCKIPSD-204ENST00000416649 TTPAP49638 278 aa14.07□□□□□ -0.16
NCKIPSD-204ENST00000416649 ETV1P50549 477 aa14.07□□□□□ -0.16
NCKIPSD-204ENST00000416649 CRYBA2P53672 197 aa14.07□□□□□ -0.16
NCKIPSD-204ENST00000416649 DSTNP60981 165 aa14.07□□□□□ -0.16
NCKIPSD-204ENST00000416649 TUSC3Q13454 348 aa14.07□□□□□ -0.16
NCKIPSD-204ENST00000416649 GRM7Q14831 915 aa14.07□□□□□ -0.16
NCKIPSD-204ENST00000416649 SF1Q15637 639 aaKnown RBP14.07□□□□□ -0.16
NCKIPSD-204ENST00000416649 DUOXA1Q1HG43 343 aa14.07□□□□□ -0.16
NCKIPSD-204ENST00000416649 MICAQ29983 383 aa14.07□□□□□ -0.16
NCKIPSD-204ENST00000416649 LSRQ86X29 649 aaPredicted RBP14.07□□□□□ -0.16
NCKIPSD-204ENST00000416649 METTL23Q86XA0 190 aa14.07□□□□□ -0.16
NCKIPSD-204ENST00000416649 ZNF655Q8N720 491 aaPredicted RBP14.07□□□□□ -0.16
NCKIPSD-204ENST00000416649 ZFP41Q8N8Y5 198 aa14.07□□□□□ -0.16
NCKIPSD-204ENST00000416649 KLHL6Q8WZ60 621 aa14.07□□□□□ -0.16
NCKIPSD-204ENST00000416649 RBPMSQ93062 196 aaKnown RBP14.07□□□□□ -0.16
NCKIPSD-204ENST00000416649 APIPQ96GX9 242 aa14.07□□□□□ -0.16
NCKIPSD-204ENST00000416649 DEFB118Q96PH6 123 aa14.07□□□□□ -0.16
NCKIPSD-204ENST00000416649 MARVELD1Q9BSK0 173 aa14.07□□□□□ -0.16
NCKIPSD-204ENST00000416649 DOHHQ9BU89 302 aa14.07□□□□□ -0.16
NCKIPSD-204ENST00000416649 UBQLN2Q9UHD9 624 aa14.07□□□□□ -0.16
NCKIPSD-204ENST00000416649 H3BN98 237 aa14.07□□□□□ -0.16
NCKIPSD-204ENST00000416649 CHP2O43745 196 aa14.07□□□□□ -0.16
NCKIPSD-204ENST00000416649 HCN1O60741 890 aa14.07□□□□□ -0.16
NCKIPSD-204ENST00000416649 IFNA7P01567 189 aa14.07□□□□□ -0.16
NCKIPSD-204ENST00000416649 LHX8Q68G74 356 aa14.07□□□□□ -0.16
NCKIPSD-204ENST00000416649 GDPGP1Q6ZNW5 385 aa14.07□□□□□ -0.16
NCKIPSD-204ENST00000416649 TSEN54Q7Z6J9 526 aaKnown RBP14.07□□□□□ -0.16
NCKIPSD-204ENST00000416649 LUZP2Q86TE4 346 aa14.07□□□□□ -0.16
NCKIPSD-204ENST00000416649 SYT12Q8IV01 421 aa14.07□□□□□ -0.16
NCKIPSD-204ENST00000416649 DUSP18Q8NEJ0 188 aa14.07□□□□□ -0.16
NCKIPSD-204ENST00000416649 ASIC4Q96FT7 647 aa14.07□□□□□ -0.16
NCKIPSD-204ENST00000416649 KCTD7Q96MP8 289 aa14.07□□□□□ -0.16
NCKIPSD-204ENST00000416649 ZYG11BQ9C0D3 744 aa14.07□□□□□ -0.16
NCKIPSD-204ENST00000416649 CNOT2Q9NZN8 540 aaKnown RBP14.07□□□□□ -0.16
NCKIPSD-204ENST00000416649 TPST2O60704 377 aa14.06□□□□□ -0.16
NCKIPSD-204ENST00000416649 CFDP00746 253 aaPredicted RBP14.06□□□□□ -0.16
NCKIPSD-204ENST00000416649 PROS1P07225 676 aa14.06□□□□□ -0.16
NCKIPSD-204ENST00000416649 AGFG1P52594 562 aaKnown RBP14.06□□□□□ -0.16
NCKIPSD-204ENST00000416649 ZNF140P52738 457 aaPredicted RBP14.06□□□□□ -0.16
NCKIPSD-204ENST00000416649 PTPN5P54829 565 aa14.06□□□□□ -0.16
NCKIPSD-204ENST00000416649 UAP1L1Q3KQV9 507 aa14.06□□□□□ -0.16
NCKIPSD-204ENST00000416649 CD300LGQ6UXG3 332 aa14.06□□□□□ -0.16
NCKIPSD-204ENST00000416649 LIMS2Q7Z4I7 341 aa14.06□□□□□ -0.16
NCKIPSD-204ENST00000416649 PGBD3Q8N328 593 aa14.06□□□□□ -0.16
NCKIPSD-204ENST00000416649 ATAD1Q8NBU5 361 aa14.06□□□□□ -0.16
NCKIPSD-204ENST00000416649 MSLNLQ96KJ4 702 aa14.06□□□□□ -0.16
NCKIPSD-204ENST00000416649 LINC00052Q96N35 136 aa14.06□□□□□ -0.16
NCKIPSD-204ENST00000416649 FAM193BQ96PV7 902 aaPredicted RBP14.06□□□□□ -0.16
NCKIPSD-204ENST00000416649 MND1Q9BWT6 205 aa14.06□□□□□ -0.16
NCKIPSD-204ENST00000416649 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.06□□□□□ -0.16
NCKIPSD-204ENST00000416649 CIPCQ9C0C6 399 aa14.06□□□□□ -0.16
NCKIPSD-204ENST00000416649 PIGUQ9H490 435 aa14.06□□□□□ -0.16
NCKIPSD-204ENST00000416649 PDCD11Q14690 1871 aaKnown RBP14.06□□□□□ -0.16
NCKIPSD-204ENST00000416649 LOC105369274A0A096LPK9 316 aa14.06□□□□□ -0.16
NCKIPSD-204ENST00000416649 IL1AP01583 271 aa14.06□□□□□ -0.16
NCKIPSD-204ENST00000416649 TPOP07202 933 aa14.06□□□□□ -0.16
NCKIPSD-204ENST00000416649 PCSK1P29120 753 aa14.06□□□□□ -0.16
NCKIPSD-204ENST00000416649 OR1E1P30953 314 aa14.06□□□□□ -0.16
NCKIPSD-204ENST00000416649 NNMTP40261 264 aa14.06□□□□□ -0.16
NCKIPSD-204ENST00000416649 CRATP43155 626 aa14.06□□□□□ -0.16
NCKIPSD-204ENST00000416649 DDX39BQ13838 428 aaKnown RBP14.06□□□□□ -0.16
NCKIPSD-204ENST00000416649 ATAT1Q5SQI0 421 aa14.06□□□□□ -0.16
NCKIPSD-204ENST00000416649 OR4N4Q8N0Y3 316 aa14.06□□□□□ -0.16
NCKIPSD-204ENST00000416649 UMODL1-AS1Q8N2C9 162 aa14.06□□□□□ -0.16
NCKIPSD-204ENST00000416649 CLDN19Q8N6F1 224 aa14.06□□□□□ -0.16
NCKIPSD-204ENST00000416649 KCNJ9Q92806 393 aa14.06□□□□□ -0.16
NCKIPSD-204ENST00000416649 RPRD1AQ96P16 312 aaPredicted RBP14.06□□□□□ -0.16
NCKIPSD-204ENST00000416649 KATNB1Q9BVA0 655 aa14.06□□□□□ -0.16
NCKIPSD-204ENST00000416649 RBCK1Q9BYM8 510 aa14.06□□□□□ -0.16
NCKIPSD-204ENST00000416649 NMUR1Q9HB89 426 aa14.06□□□□□ -0.16
NCKIPSD-204ENST00000416649 ABCC13Q9NSE7 274 aa14.06□□□□□ -0.16
NCKIPSD-204ENST00000416649 NDUFB11Q9NX14 153 aa14.06□□□□□ -0.16
NCKIPSD-204ENST00000416649 ZMAT5Q9UDW3 170 aaKnown RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms