RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 TERF2Q15554 542 aa10.48□□□□□ -0.73
RFFL-204ENST00000414419 ELAVL1Q15717 326 aaKnown RBP10.48□□□□□ -0.73
RFFL-204ENST00000414419 ZNF766Q5HY98 468 aa10.48□□□□□ -0.73
RFFL-204ENST00000414419 TUBA3EQ6PEY2 450 aa10.48□□□□□ -0.73
RFFL-204ENST00000414419 CYP20A1Q6UW02 462 aa10.48□□□□□ -0.73
RFFL-204ENST00000414419 ZNF793Q6ZN11 406 aa10.48□□□□□ -0.73
RFFL-204ENST00000414419 LGI4Q8N135 537 aa10.48□□□□□ -0.73
RFFL-204ENST00000414419 RNF175Q8N4F7 328 aa10.48□□□□□ -0.73
RFFL-204ENST00000414419 KIF2BQ8N4N8 673 aa10.48□□□□□ -0.73
RFFL-204ENST00000414419 TMEM52Q8NDY8 209 aa10.48□□□□□ -0.73
RFFL-204ENST00000414419 B3GNT7Q8NFL0 401 aa10.48□□□□□ -0.73
RFFL-204ENST00000414419 OR52B6Q8NGF0 335 aa10.48□□□□□ -0.73
RFFL-204ENST00000414419 ACMSDQ8TDX5 336 aa10.48□□□□□ -0.73
RFFL-204ENST00000414419 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.48□□□□□ -0.73
RFFL-204ENST00000414419 DAZLQ92904 295 aaKnown RBP10.48□□□□□ -0.73
RFFL-204ENST00000414419 VMP1Q96GC9 406 aa10.48□□□□□ -0.73
RFFL-204ENST00000414419 C5orf34Q96MH7 638 aa10.48□□□□□ -0.73
RFFL-204ENST00000414419 SERPINI1Q99574 410 aa10.48□□□□□ -0.73
RFFL-204ENST00000414419 BARD1Q99728 777 aaKnown RBP10.48□□□□□ -0.73
RFFL-204ENST00000414419 TXLNGYQ9BZA5 131 aa10.48□□□□□ -0.73
RFFL-204ENST00000414419 ANKRD10Q9NXR5 420 aa10.48□□□□□ -0.73
RFFL-204ENST00000414419 PSD3Q9NYI0 1048 aa10.48□□□□□ -0.73
RFFL-204ENST00000414419 AHSPQ9NZD4 102 aa10.48□□□□□ -0.73
RFFL-204ENST00000414419 KCMF1Q9P0J7 381 aa10.48□□□□□ -0.73
RFFL-204ENST00000414419 PHF11Q9UIL8 331 aa10.48□□□□□ -0.73
RFFL-204ENST00000414419 TRBV11-1A0A0K0K1C0 115 aa10.47□□□□□ -0.73
RFFL-204ENST00000414419 A8MT66 165 aa10.47□□□□□ -0.73
RFFL-204ENST00000414419 GOLGA8RI6L899 631 aa10.47□□□□□ -0.73
RFFL-204ENST00000414419 PLPP1O14494 284 aa10.47□□□□□ -0.73
RFFL-204ENST00000414419 CDK2AP1O14519 115 aa10.47□□□□□ -0.73
RFFL-204ENST00000414419 DYRK3O43781 588 aa10.47□□□□□ -0.73
RFFL-204ENST00000414419 LDB3O75112 727 aa10.47□□□□□ -0.73
RFFL-204ENST00000414419 SUPT7LO94864 414 aa10.47□□□□□ -0.73
RFFL-204ENST00000414419 SCELO95171 688 aa10.47□□□□□ -0.73
RFFL-204ENST00000414419 OTCP00480 354 aa10.47□□□□□ -0.73
RFFL-204ENST00000414419 GSTA1P08263 222 aa10.47□□□□□ -0.73
RFFL-204ENST00000414419 PYGBP11216 843 aa10.47□□□□□ -0.73
RFFL-204ENST00000414419 EDN3P14138 238 aa10.47□□□□□ -0.73
RFFL-204ENST00000414419 COX7A2P14406 83 aa10.47□□□□□ -0.73
RFFL-204ENST00000414419 KRT15P19012 456 aa10.47□□□□□ -0.73
RFFL-204ENST00000414419 CD96P40200 585 aa10.47□□□□□ -0.73
RFFL-204ENST00000414419 BUD31P41223 144 aaPredicted RBP10.47□□□□□ -0.73
RFFL-204ENST00000414419 CYB561P49447 251 aa10.47□□□□□ -0.73
RFFL-204ENST00000414419 NEK2P51955 445 aa10.47□□□□□ -0.73
RFFL-204ENST00000414419 BIKQ13323 160 aa10.47□□□□□ -0.73
RFFL-204ENST00000414419 CUL3Q13618 768 aa10.47□□□□□ -0.73
RFFL-204ENST00000414419 OR1C1Q15619 314 aa10.47□□□□□ -0.73
RFFL-204ENST00000414419 C10orf62Q5T681 223 aaPredicted RBP10.47□□□□□ -0.73
RFFL-204ENST00000414419 FRG2Q64ET8 278 aa10.47□□□□□ -0.73
RFFL-204ENST00000414419 GPR180Q86V85 440 aa10.47□□□□□ -0.73
RFFL-204ENST00000414419 ZCCHC7Q8N3Z6 543 aaKnown RBP10.47□□□□□ -0.73
RFFL-204ENST00000414419 TMEM178AQ8NBL3 297 aa10.47□□□□□ -0.73
RFFL-204ENST00000414419 FAM98AQ8NCA5 519 aaKnown RBP10.47□□□□□ -0.73
RFFL-204ENST00000414419 ST6GALNAC3Q8NDV1 305 aa10.47□□□□□ -0.73
RFFL-204ENST00000414419 NFAM1Q8NET5 270 aaPredicted RBP10.47□□□□□ -0.73
RFFL-204ENST00000414419 OR4F6Q8NGB9 312 aa10.47□□□□□ -0.73
RFFL-204ENST00000414419 OR14A16Q8NHC5 309 aa10.47□□□□□ -0.73
RFFL-204ENST00000414419 WDR20Q8TBZ3 569 aa10.47□□□□□ -0.73
RFFL-204ENST00000414419 THAP3Q8WTV1 239 aaPredicted RBP10.47□□□□□ -0.73
RFFL-204ENST00000414419 NSUN5Q96P11 429 aaKnown RBP10.47□□□□□ -0.73
RFFL-204ENST00000414419 FRG2BQ96QU4 278 aa10.47□□□□□ -0.73
RFFL-204ENST00000414419 SORBS1Q9BX66 1292 aaKnown RBP10.47□□□□□ -0.73
RFFL-204ENST00000414419 ELOVL6Q9H5J4 265 aa10.47□□□□□ -0.73
RFFL-204ENST00000414419 RPF2Q9H7B2 306 aaKnown RBP10.47□□□□□ -0.73
RFFL-204ENST00000414419 PPCSQ9HAB8 311 aa10.47□□□□□ -0.73
RFFL-204ENST00000414419 WDR41Q9HAD4 459 aa10.47□□□□□ -0.73
RFFL-204ENST00000414419 ZBTB26Q9HCK0 441 aa10.47□□□□□ -0.73
RFFL-204ENST00000414419 LYARQ9NX58 379 aaKnown RBP10.47□□□□□ -0.73
RFFL-204ENST00000414419 TMEM216Q9P0N5 145 aa10.47□□□□□ -0.73
RFFL-204ENST00000414419 LRFN1Q9P244 771 aa10.47□□□□□ -0.73
RFFL-204ENST00000414419 VTI1BQ9UEU0 232 aa10.47□□□□□ -0.73
RFFL-204ENST00000414419 DCDC2Q9UHG0 476 aa10.47□□□□□ -0.73
RFFL-204ENST00000414419 DIDO1Q9BTC0 2240 aaKnown RBP10.47□□□□□ -0.73
RFFL-204ENST00000414419 LRRK2Q5S007 2527 aa10.47□□□□□ -0.73
RFFL-204ENST00000414419 ASH1LQ9NR48 2969 aaKnown RBP10.46□□□□□ -0.73
RFFL-204ENST00000414419 MYOCOSA0A1B0GUC4 107 aa10.46□□□□□ -0.73
RFFL-204ENST00000414419 ARHGAP10A1A4S6 786 aa10.46□□□□□ -0.73
RFFL-204ENST00000414419 C17orf105B2RV13 164 aa10.46□□□□□ -0.73
RFFL-204ENST00000414419 MAN1A2O60476 641 aa10.46□□□□□ -0.73
RFFL-204ENST00000414419 ZFAND5O76080 213 aa10.46□□□□□ -0.73
RFFL-204ENST00000414419 RPS17P08708 135 aaKnown RBP10.46□□□□□ -0.73
RFFL-204ENST00000414419 ATP5F1P24539 256 aaPredicted RBP10.46□□□□□ -0.73
RFFL-204ENST00000414419 TNFRSF8P28908 595 aa10.46□□□□□ -0.73
RFFL-204ENST00000414419 TPP2P29144 1249 aaPredicted RBP10.46□□□□□ -0.73
RFFL-204ENST00000414419 PPP2R1BP30154 601 aa10.46□□□□□ -0.73
RFFL-204ENST00000414419 ST13P50502 369 aaKnown RBP10.46□□□□□ -0.73
RFFL-204ENST00000414419 CDH13P55290 713 aa10.46□□□□□ -0.73
RFFL-204ENST00000414419 MLF1P58340 268 aa10.46□□□□□ -0.73
RFFL-204ENST00000414419 HERVK_113P63132 956 aa10.46□□□□□ -0.73
RFFL-204ENST00000414419 CLCQ05315 142 aa10.46□□□□□ -0.73
RFFL-204ENST00000414419 TRAF3Q13114 568 aa10.46□□□□□ -0.73
RFFL-204ENST00000414419 GGTA1PQ4G0N0 100 aa10.46□□□□□ -0.73
RFFL-204ENST00000414419 SGO1Q5FBB7 561 aa10.46□□□□□ -0.73
RFFL-204ENST00000414419 SPINK14Q6IE38 97 aa10.46□□□□□ -0.73
RFFL-204ENST00000414419 NUDT13Q86X67 352 aa10.46□□□□□ -0.73
RFFL-204ENST00000414419 SLC22A9Q8IVM8 553 aa10.46□□□□□ -0.73
RFFL-204ENST00000414419 TMEM156Q8N614 296 aa10.46□□□□□ -0.73
RFFL-204ENST00000414419 APCDD1LQ8NCL9 501 aa10.46□□□□□ -0.73
RFFL-204ENST00000414419 MORN4Q8NDC4 146 aa10.46□□□□□ -0.73
RFFL-204ENST00000414419 DNAJB8Q8NHS0 232 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms