RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 PVRP15151 417 aa9.47□□□□□ -0.89
DDB1-202ENST00000414411 CDH3P22223 829 aa9.47□□□□□ -0.89
DDB1-202ENST00000414411 CCR8P51685 355 aa9.47□□□□□ -0.89
DDB1-202ENST00000414411 MTPNP58546 118 aa9.47□□□□□ -0.89
DDB1-202ENST00000414411 HMGCS1Q01581 520 aa9.47□□□□□ -0.89
DDB1-202ENST00000414411 PWP1Q13610 501 aa9.47□□□□□ -0.89
DDB1-202ENST00000414411 SELPLGQ14242 412 aa9.47□□□□□ -0.89
DDB1-202ENST00000414411 GGTA1PQ4G0N0 100 aa9.47□□□□□ -0.89
DDB1-202ENST00000414411 XKR6Q5GH73 641 aa9.47□□□□□ -0.89
DDB1-202ENST00000414411 TMTC4Q5T4D3 741 aa9.47□□□□□ -0.89
DDB1-202ENST00000414411 KRT80Q6KB66 452 aa9.47□□□□□ -0.89
DDB1-202ENST00000414411 GLB1L3Q8NCI6 653 aaPredicted RBP9.47□□□□□ -0.89
DDB1-202ENST00000414411 ZNF740Q8NDX6 193 aa9.47□□□□□ -0.89
DDB1-202ENST00000414411 OR8J3Q8NGG0 315 aa9.47□□□□□ -0.89
DDB1-202ENST00000414411 NUDT8Q8WV74 236 aa9.47□□□□□ -0.89
DDB1-202ENST00000414411 KLHL6Q8WZ60 621 aa9.47□□□□□ -0.89
DDB1-202ENST00000414411 ZBTB18Q99592 522 aa9.47□□□□□ -0.89
DDB1-202ENST00000414411 EFCAB11Q9BUY7 163 aa9.47□□□□□ -0.89
DDB1-202ENST00000414411 TRIM4Q9C037 500 aa9.47□□□□□ -0.89
DDB1-202ENST00000414411 GRIP2Q9C0E4 1043 aa9.47□□□□□ -0.89
DDB1-202ENST00000414411 RBM38Q9H0Z9 239 aaKnown RBP9.47□□□□□ -0.89
DDB1-202ENST00000414411 LRTM1Q9HBL6 345 aa9.47□□□□□ -0.89
DDB1-202ENST00000414411 ANKMY1Q9P2S6 941 aa9.47□□□□□ -0.89
DDB1-202ENST00000414411 PILRAQ9UKJ1 303 aa9.47□□□□□ -0.89
DDB1-202ENST00000414411 ZNF490Q9ULM2 529 aaPredicted RBP9.47□□□□□ -0.89
DDB1-202ENST00000414411 COMMD3-BMI1R4GMX3 469 aa9.47□□□□□ -0.89
DDB1-202ENST00000414411 KIF26BQ2KJY2 2108 aa9.47□□□□□ -0.89
DDB1-202ENST00000414411 SPTBN2O15020 2390 aa9.47□□□□□ -0.89
DDB1-202ENST00000414411 H0YIV9 168 aa9.46□□□□□ -0.89
DDB1-202ENST00000414411 PLOD2O00469 737 aa9.46□□□□□ -0.89
DDB1-202ENST00000414411 ACOX3O15254 700 aa9.46□□□□□ -0.89
DDB1-202ENST00000414411 LCMT2O60294 686 aaKnown RBP9.46□□□□□ -0.89
DDB1-202ENST00000414411 CTSVO60911 334 aa9.46□□□□□ -0.89
DDB1-202ENST00000414411 KCNH1O95259 989 aa9.46□□□□□ -0.89
DDB1-202ENST00000414411 RASAL1O95294 804 aa9.46□□□□□ -0.89
DDB1-202ENST00000414411 H6PDO95479 791 aa9.46□□□□□ -0.89
DDB1-202ENST00000414411 ANKRD34CP0C6C1 535 aa9.46□□□□□ -0.89
DDB1-202ENST00000414411 CDK4P11802 303 aa9.46□□□□□ -0.89
DDB1-202ENST00000414411 JUPP14923 745 aa9.46□□□□□ -0.89
DDB1-202ENST00000414411 ETS2P15036 469 aa9.46□□□□□ -0.89
DDB1-202ENST00000414411 SOX11P35716 441 aa9.46□□□□□ -0.89
DDB1-202ENST00000414411 HNF4AP41235 474 aa9.46□□□□□ -0.89
DDB1-202ENST00000414411 PDX1P52945 283 aa9.46□□□□□ -0.89
DDB1-202ENST00000414411 NR1H2P55055 460 aa9.46□□□□□ -0.89
DDB1-202ENST00000414411 INSM1Q01101 510 aaPredicted RBP9.46□□□□□ -0.89
DDB1-202ENST00000414411 MEF2AQ02078 507 aaPredicted RBP9.46□□□□□ -0.89
DDB1-202ENST00000414411 SPIDRQ14159 915 aa9.46□□□□□ -0.89
DDB1-202ENST00000414411 IMPG1Q17R60 797 aa9.46□□□□□ -0.89
DDB1-202ENST00000414411 FAM174BQ3ZCQ3 159 aa9.46□□□□□ -0.89
DDB1-202ENST00000414411 CACHD1Q5VU97 1274 aa9.46□□□□□ -0.89
DDB1-202ENST00000414411 CDCP2Q5VXM1 449 aa9.46□□□□□ -0.89
DDB1-202ENST00000414411 GRHL2Q6ISB3 625 aa9.46□□□□□ -0.89
DDB1-202ENST00000414411 TMPRSS11BQ86T26 416 aa9.46□□□□□ -0.89
DDB1-202ENST00000414411 LIX1Q8N485 282 aa9.46□□□□□ -0.89
DDB1-202ENST00000414411 DTWD1Q8N5C7 304 aa9.46□□□□□ -0.89
DDB1-202ENST00000414411 DGCR14Q96DF8 476 aaKnown RBP9.46□□□□□ -0.89
DDB1-202ENST00000414411 SLC41A2Q96JW4 573 aa9.46□□□□□ -0.89
DDB1-202ENST00000414411 NSMCE2Q96MF7 247 aa9.46□□□□□ -0.89
DDB1-202ENST00000414411 ADI1Q9BV57 179 aa9.46□□□□□ -0.89
DDB1-202ENST00000414411 PITHD1Q9GZP4 211 aaPredicted RBP9.46□□□□□ -0.89
DDB1-202ENST00000414411 KLHL25Q9H0H3 589 aa9.46□□□□□ -0.89
DDB1-202ENST00000414411 ZNF768Q9H5H4 540 aaKnown RBP9.46□□□□□ -0.89
DDB1-202ENST00000414411 NT5DC2Q9H857 520 aa9.46□□□□□ -0.89
DDB1-202ENST00000414411 ACTR8Q9H981 624 aa9.46□□□□□ -0.89
DDB1-202ENST00000414411 SYNPO2LQ9H987 977 aa9.46□□□□□ -0.89
DDB1-202ENST00000414411 FAM60AQ9NP50 221 aa9.46□□□□□ -0.89
DDB1-202ENST00000414411 OLAHQ9NV23 265 aa9.46□□□□□ -0.89
DDB1-202ENST00000414411 VAPAQ9P0L0 249 aa9.46□□□□□ -0.89
DDB1-202ENST00000414411 TSC22D4Q9Y3Q8 395 aa9.46□□□□□ -0.89
DDB1-202ENST00000414411 WDFY3Q8IZQ1 3526 aa9.46□□□□□ -0.89
DDB1-202ENST00000414411 SPAARA0A1B0GVQ0 90 aa9.46□□□□□ -0.9
DDB1-202ENST00000414411 TRBC2A0A5B9 178 aa9.46□□□□□ -0.9
DDB1-202ENST00000414411 H3BNH8 94 aa9.46□□□□□ -0.9
DDB1-202ENST00000414411 HAT1O14929 419 aa9.46□□□□□ -0.9
DDB1-202ENST00000414411 ZBTB11O95625 1053 aaPredicted RBP9.46□□□□□ -0.9
DDB1-202ENST00000414411 KRT6AP02538 564 aa9.46□□□□□ -0.9
DDB1-202ENST00000414411 KRT6BP04259 564 aa9.46□□□□□ -0.9
DDB1-202ENST00000414411 GABRA4P48169 554 aa9.46□□□□□ -0.9
DDB1-202ENST00000414411 KRT6CP48668 564 aa9.46□□□□□ -0.9
DDB1-202ENST00000414411 PPM1FP49593 454 aaPredicted RBP9.46□□□□□ -0.9
DDB1-202ENST00000414411 REEP5Q00765 189 aa9.46□□□□□ -0.9
DDB1-202ENST00000414411 GUCA2AQ02747 115 aa9.46□□□□□ -0.9
DDB1-202ENST00000414411 LAPTM5Q13571 262 aa9.46□□□□□ -0.9
DDB1-202ENST00000414411 ADRM1Q16186 407 aa9.46□□□□□ -0.9
DDB1-202ENST00000414411 CPSF6Q16630 551 aaKnown RBP eCLIP9.46□□□□□ -0.9
DDB1-202ENST00000414411 SGO1Q5FBB7 561 aa9.46□□□□□ -0.9
DDB1-202ENST00000414411 GLYATQ6IB77 296 aa9.46□□□□□ -0.9
DDB1-202ENST00000414411 TMIGD1Q6UXZ0 262 aa9.46□□□□□ -0.9
DDB1-202ENST00000414411 RBM44Q6ZP01 1051 aaKnown RBP9.46□□□□□ -0.9
DDB1-202ENST00000414411 KMT5CQ86Y97 462 aa9.46□□□□□ -0.9
DDB1-202ENST00000414411 LAS2Q8IYD9 372 aa9.46□□□□□ -0.9
DDB1-202ENST00000414411 D2HGDHQ8N465 521 aa9.46□□□□□ -0.9
DDB1-202ENST00000414411 DNAJC22Q8N4W6 341 aa9.46□□□□□ -0.9
DDB1-202ENST00000414411 C19orf47Q8N9M1 422 aaKnown RBP9.46□□□□□ -0.9
DDB1-202ENST00000414411 FAM47BQ8NA70 645 aa9.46□□□□□ -0.9
DDB1-202ENST00000414411 TSPAN14Q8NG11 270 aa9.46□□□□□ -0.9
DDB1-202ENST00000414411 WDR20Q8TBZ3 569 aa9.46□□□□□ -0.9
DDB1-202ENST00000414411 GTF2H4Q92759 462 aa9.46□□□□□ -0.9
DDB1-202ENST00000414411 RMND5BQ96G75 393 aaPredicted RBP9.46□□□□□ -0.9
DDB1-202ENST00000414411 TCTN2Q96GX1 697 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms