RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 CYR61O00622 381 aa13.8□□□□□ -0.2
CHD1-202ENST00000414220 TRIM13O60858 407 aa13.8□□□□□ -0.2
CHD1-202ENST00000414220 ESRRBO95718 433 aa13.8□□□□□ -0.2
CHD1-202ENST00000414220 PDGFAP04085 211 aa13.8□□□□□ -0.2
CHD1-202ENST00000414220 IFNA16P05015 189 aa13.8□□□□□ -0.2
CHD1-202ENST00000414220 COX7A2P14406 83 aa13.8□□□□□ -0.2
CHD1-202ENST00000414220 TNNI3P19429 210 aa13.8□□□□□ -0.2
CHD1-202ENST00000414220 NAGLUP54802 743 aa13.8□□□□□ -0.2
CHD1-202ENST00000414220 ARG2P78540 354 aa13.8□□□□□ -0.2
CHD1-202ENST00000414220 Q0VFX4 171 aa13.8□□□□□ -0.2
CHD1-202ENST00000414220 TERF2Q15554 542 aa13.8□□□□□ -0.2
CHD1-202ENST00000414220 LETMD1Q6P1Q0 360 aa13.8□□□□□ -0.2
CHD1-202ENST00000414220 ZNF793Q6ZN11 406 aa13.8□□□□□ -0.2
CHD1-202ENST00000414220 LINC00696Q6ZRV3 163 aa13.8□□□□□ -0.2
CHD1-202ENST00000414220 RPS27LQ71UM5 84 aaKnown RBP13.8□□□□□ -0.2
CHD1-202ENST00000414220 TMEM132CQ8N3T6 1108 aa13.8□□□□□ -0.2
CHD1-202ENST00000414220 SLC5A8Q8N695 610 aa13.8□□□□□ -0.2
CHD1-202ENST00000414220 SIRT6Q8N6T7 355 aa13.8□□□□□ -0.2
CHD1-202ENST00000414220 GBP7Q8N8V2 638 aaPredicted RBP13.8□□□□□ -0.2
CHD1-202ENST00000414220 BANPQ8N9N5 519 aa13.8□□□□□ -0.2
CHD1-202ENST00000414220 SUN3Q8TAQ9 357 aa13.8□□□□□ -0.2
CHD1-202ENST00000414220 DNAJB14Q8TBM8 379 aa13.8□□□□□ -0.2
CHD1-202ENST00000414220 TANKQ92844 425 aa13.8□□□□□ -0.2
CHD1-202ENST00000414220 DAZLQ92904 295 aaKnown RBP13.8□□□□□ -0.2
CHD1-202ENST00000414220 MAPKAP1Q9BPZ7 522 aa13.8□□□□□ -0.2
CHD1-202ENST00000414220 DDX31Q9H8H2 851 aaKnown RBP13.8□□□□□ -0.2
CHD1-202ENST00000414220 MID1IP1Q9NPA3 183 aa13.8□□□□□ -0.2
CHD1-202ENST00000414220 NECTIN3Q9NQS3 549 aa13.8□□□□□ -0.2
CHD1-202ENST00000414220 PNO1Q9NRX1 252 aaKnown RBP13.8□□□□□ -0.2
CHD1-202ENST00000414220 STMN3Q9NZ72 180 aa13.8□□□□□ -0.2
CHD1-202ENST00000414220 ADAM29Q9UKF5 820 aa13.8□□□□□ -0.2
CHD1-202ENST00000414220 B3GNT3Q9Y2A9 372 aa13.8□□□□□ -0.2
CHD1-202ENST00000414220 CLCA3PQ9Y6N3 262 aa13.8□□□□□ -0.2
CHD1-202ENST00000414220 GOLGA6L10A6NI86 522 aa13.79□□□□□ -0.2
CHD1-202ENST00000414220 SAGE2PA6NJ88 616 aa13.79□□□□□ -0.2
CHD1-202ENST00000414220 CDK2AP1O14519 115 aa13.79□□□□□ -0.2
CHD1-202ENST00000414220 PDYNP01213 254 aa13.79□□□□□ -0.2
CHD1-202ENST00000414220 SLC26A5P58743 744 aa13.79□□□□□ -0.2
CHD1-202ENST00000414220 CSTF3Q12996 717 aaKnown RBP13.79□□□□□ -0.2
CHD1-202ENST00000414220 TLR1Q15399 786 aa13.79□□□□□ -0.2
CHD1-202ENST00000414220 MEP1AQ16819 746 aa13.79□□□□□ -0.2
CHD1-202ENST00000414220 CEP85LQ5SZL2 805 aa13.79□□□□□ -0.2
CHD1-202ENST00000414220 CCNYL2Q5T2Q4 361 aa13.79□□□□□ -0.2
CHD1-202ENST00000414220 IGFL2Q6UWQ7 119 aa13.79□□□□□ -0.2
CHD1-202ENST00000414220 SCUBE1Q8IWY4 988 aa13.79□□□□□ -0.2
CHD1-202ENST00000414220 RNF175Q8N4F7 328 aa13.79□□□□□ -0.2
CHD1-202ENST00000414220 RBM18Q96H35 190 aaKnown RBP13.79□□□□□ -0.2
CHD1-202ENST00000414220 CNDP1Q96KN2 507 aa13.79□□□□□ -0.2
CHD1-202ENST00000414220 WDR77Q9BQA1 342 aaPredicted RBP13.79□□□□□ -0.2
CHD1-202ENST00000414220 MESP1Q9BRJ9 268 aa13.79□□□□□ -0.2
CHD1-202ENST00000414220 TRMOQ9BU70 441 aa13.79□□□□□ -0.2
CHD1-202ENST00000414220 MFRPQ9BY79 579 aa13.79□□□□□ -0.2
CHD1-202ENST00000414220 ALOXE3Q9BYJ1 711 aa13.79□□□□□ -0.2
CHD1-202ENST00000414220 RPF2Q9H7B2 306 aaKnown RBP13.79□□□□□ -0.2
CHD1-202ENST00000414220 ADAP2Q9NPF8 381 aa13.79□□□□□ -0.2
CHD1-202ENST00000414220 KCMF1Q9P0J7 381 aa13.79□□□□□ -0.2
CHD1-202ENST00000414220 VPS29Q9UBQ0 182 aa13.79□□□□□ -0.2
CHD1-202ENST00000414220 IGKV3D-11A0A0A0MRZ8 115 aa13.78□□□□□ -0.2
CHD1-202ENST00000414220 A8MUA0 341 aa13.78□□□□□ -0.2
CHD1-202ENST00000414220 J3QKU1 62 aa13.78□□□□□ -0.2
CHD1-202ENST00000414220 MANBAO00462 879 aa13.78□□□□□ -0.2
CHD1-202ENST00000414220 PPP6CO00743 305 aa13.78□□□□□ -0.2
CHD1-202ENST00000414220 CTIFO43310 598 aaKnown RBP13.78□□□□□ -0.2
CHD1-202ENST00000414220 SPAG7O75391 227 aa13.78□□□□□ -0.2
CHD1-202ENST00000414220 FAM58BPP0C7Q3 252 aa13.78□□□□□ -0.2
CHD1-202ENST00000414220 ITGAMP11215 1152 aa13.78□□□□□ -0.2
CHD1-202ENST00000414220 BSGP35613 385 aa13.78□□□□□ -0.2
CHD1-202ENST00000414220 CLCN2P51788 898 aa13.78□□□□□ -0.2
CHD1-202ENST00000414220 EFNA3P52797 238 aa13.78□□□□□ -0.2
CHD1-202ENST00000414220 TNFRSF17Q02223 184 aa13.78□□□□□ -0.2
CHD1-202ENST00000414220 ZNF844Q08AG5 666 aa13.78□□□□□ -0.2
CHD1-202ENST00000414220 ELAVL1Q15717 326 aaKnown RBP13.78□□□□□ -0.2
CHD1-202ENST00000414220 IMPG1Q17R60 797 aa13.78□□□□□ -0.2
CHD1-202ENST00000414220 NADK2Q4G0N4 442 aa13.78□□□□□ -0.2
CHD1-202ENST00000414220 LRIG3Q6UXM1 1119 aa13.78□□□□□ -0.2
CHD1-202ENST00000414220 FRMD7Q6ZUT3 714 aa13.78□□□□□ -0.2
CHD1-202ENST00000414220 CLNKQ7Z7G1 428 aa13.78□□□□□ -0.2
CHD1-202ENST00000414220 IQCKQ8N0W5 287 aa13.78□□□□□ -0.2
CHD1-202ENST00000414220 METTL4Q8N3J2 472 aa13.78□□□□□ -0.2
CHD1-202ENST00000414220 RBMXL3Q8N7X1 1067 aaKnown RBP13.78□□□□□ -0.2
CHD1-202ENST00000414220 B3GNT7Q8NFL0 401 aa13.78□□□□□ -0.2
CHD1-202ENST00000414220 OR14A16Q8NHC5 309 aa13.78□□□□□ -0.2
CHD1-202ENST00000414220 TCP10LQ8TDR4 215 aa13.78□□□□□ -0.2
CHD1-202ENST00000414220 FAM111AQ96PZ2 611 aa13.78□□□□□ -0.2
CHD1-202ENST00000414220 CSF3RQ99062 836 aa13.78□□□□□ -0.2
CHD1-202ENST00000414220 PELOQ9BRX2 385 aaKnown RBP13.78□□□□□ -0.2
CHD1-202ENST00000414220 SORBS1Q9BX66 1292 aaKnown RBP13.78□□□□□ -0.2
CHD1-202ENST00000414220 DEFB126Q9BYW3 111 aa13.78□□□□□ -0.2
CHD1-202ENST00000414220 GSTO2Q9H4Y5 243 aa13.78□□□□□ -0.2
CHD1-202ENST00000414220 EML4Q9HC35 981 aaKnown RBP13.78□□□□□ -0.2
CHD1-202ENST00000414220 PIEZO2Q9H5I5 2752 aa13.78□□□□□ -0.2
CHD1-202ENST00000414220 ATMQ13315 3056 aa13.78□□□□□ -0.2
CHD1-202ENST00000414220 A0A0A6YYD5 115 aa13.77□□□□□ -0.21
CHD1-202ENST00000414220 COL6A6A6NMZ7 2263 aa13.77□□□□□ -0.21
CHD1-202ENST00000414220 PROM1O43490 865 aa13.77□□□□□ -0.21
CHD1-202ENST00000414220 MYO1DO94832 1006 aa13.77□□□□□ -0.21
CHD1-202ENST00000414220 ETHE1O95571 254 aa13.77□□□□□ -0.21
CHD1-202ENST00000414220 CHEK2O96017 543 aa13.77□□□□□ -0.21
CHD1-202ENST00000414220 KLK1P06870 262 aa13.77□□□□□ -0.21
CHD1-202ENST00000414220 NR2F6P10588 404 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms