RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 EIF3KQ9UBQ5 218 aaKnown RBP3.46□□□□□ -1.86
SF3B1-203ENST00000414174 UBQLN2Q9UHD9 624 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 MSRAQ9UJ68 235 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 STOML2Q9UJZ1 356 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 ING1Q9UK53 422 aaPredicted RBP3.46□□□□□ -1.86
SF3B1-203ENST00000414174 NENFQ9UMX5 172 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 ST3GAL5Q9UNP4 418 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 PLA2G4CQ9UP65 541 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 ZFR2Q9UPR6 939 aaKnown RBP3.46□□□□□ -1.86
SF3B1-203ENST00000414174 SLC22A13Q9Y226 551 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 MRPS33Q9Y291 106 aaKnown RBP3.46□□□□□ -1.86
SF3B1-203ENST00000414174 ARL2BPQ9Y2Y0 163 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 L3MBTL1Q9Y468 752 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 MRPS18BQ9Y676 258 aaKnown RBP3.46□□□□□ -1.86
SF3B1-203ENST00000414174 NUP155O75694 1391 aa3.46□□□□□ -1.86
SF3B1-203ENST00000414174 RPTORQ8N122 1335 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 CEP162Q5TB80 1403 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 METTL15A6NJ78 407 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 RFPL4AA6NLU0 287 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 EFCAB8A8MWE9 144 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 RFPL4AL1F8VTS6 287 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 POC1B-GALNT4F8VUJ3 575 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 BCKDKO14874 412 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 GSTA4O15217 222 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 TCAPO15273 167 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 GRM6O15303 877 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 B4GALT3O60512 393 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 MOSPD3O75425 235 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 MED6O75586 246 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 GATBO75879 557 aaKnown RBP3.45□□□□□ -1.86
SF3B1-203ENST00000414174 RSL1D1O76021 490 aaKnown RBP3.45□□□□□ -1.86
SF3B1-203ENST00000414174 IFNA2P01563 188 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 RLN1P04808 185 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 SERPINB2P05120 415 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 CFIP05156 583 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 GSTA1P08263 222 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 MELTFP08582 738 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 F7P08709 466 aaPredicted RBP3.45□□□□□ -1.86
SF3B1-203ENST00000414174 C1SP09871 688 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 ELFN1P0C7U0 828 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 SMIM10L1P0DMW3 83 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 PNMTP11086 282 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 ITGAMP11215 1152 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 G6PDP11413 515 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 FGF5P12034 268 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 CEACAM1P13688 526 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 PRF1P14222 555 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 PPP3CBP16298 524 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 KLRK1P26718 216 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 DPP4P27487 766 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 TIA1P31483 386 aaKnown RBP eCLIP3.45□□□□□ -1.866e-10■■■■□ 25.3
SF3B1-203ENST00000414174 AKT2P31751 481 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 MPIP34949 423 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 PTGER4P35408 488 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 DLSTP36957 453 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 MMP13P45452 471 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 SLC6A12P48065 614 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 RGS4P49798 205 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 MEOX2P50222 304 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 RAB13P51153 203 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 CCR8P51685 355 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 SLC37A1P57057 533 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 C21orf59P57076 290 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 OR2B6P58173 313 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 GPC5P78333 572 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 IRF9Q00978 393 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 BDH1Q02338 343 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 IRF8Q02556 426 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 HSF2Q03933 536 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 GABPAQ06546 454 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 RIPPLY1Q0D2K3 151 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 MALLQ13021 153 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 GAGE1Q13065 139 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 AQP6Q13520 282 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 ALKBH1Q13686 389 aaKnown RBP3.45□□□□□ -1.86
SF3B1-203ENST00000414174 PTPRCAPQ14761 206 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 TMED2Q15363 201 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 VAMP3Q15836 100 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 GUK1Q16774 197 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 EXOC3L2Q2M3D2 409 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 BSXQ3C1V8 233 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 ALKBH6Q3KRA9 238 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 AMZ1Q400G9 498 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 GALNTL6Q49A17 601 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 XKR7Q5GH72 579 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 PCID2Q5JVF3 399 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 ACER2Q5QJU3 275 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 C6orf10Q5SRN2 563 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 PHF19Q5T6S3 580 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 PXDC1Q5TGL8 231 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 IRAK1BP1Q5VVH5 260 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 RAET1LQ5VY80 246 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 DGAT2L7PQ6IED9 249 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 DENND1BQ6P3S1 775 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 VWA1Q6PCB0 445 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 LRRN1Q6UXK5 716 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 CFAP77Q6ZQR2 320 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 ARCQ7LC44 396 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 TFAP2DQ7Z6R9 452 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 KLBQ86Z14 1044 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms