RNA–Protein interactions for RNA: ENST00000413725.5

SF1-206, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-206ENST00000413725 TRA2BP62995 288 aaKnown RBP12.4□□□□□ -0.42
SF1-206ENST00000413725 RPL38P63173 70 aaKnown RBP12.4□□□□□ -0.42
SF1-206ENST00000413725 GUCY1A3Q02108 690 aa12.4□□□□□ -0.42
SF1-206ENST00000413725 TNFRSF17Q02223 184 aa12.4□□□□□ -0.42
SF1-206ENST00000413725 TLE3Q04726 772 aa12.4□□□□□ -0.42
SF1-206ENST00000413725 SSPNQ14714 243 aa12.4□□□□□ -0.42
SF1-206ENST00000413725 GALNTL6Q49A17 601 aa12.4□□□□□ -0.42
SF1-206ENST00000413725 MRM1Q6IN84 353 aaKnown RBP12.4□□□□□ -0.42
SF1-206ENST00000413725 GALNT18Q6P9A2 607 aa12.4□□□□□ -0.42
SF1-206ENST00000413725 CCDC81Q6ZN84 652 aa12.4□□□□□ -0.42
SF1-206ENST00000413725 FAM47EQ6ZV65 393 aa12.4□□□□□ -0.42
SF1-206ENST00000413725 MED25Q71SY5 747 aa12.4□□□□□ -0.42
SF1-206ENST00000413725 WDR75Q8IWA0 830 aaKnown RBP12.4□□□□□ -0.42
SF1-206ENST00000413725 ZNF595Q8IYB9 648 aa12.4□□□□□ -0.42
SF1-206ENST00000413725 FAM47BQ8NA70 645 aa12.4□□□□□ -0.42
SF1-206ENST00000413725 METTL21AQ8WXB1 218 aa12.4□□□□□ -0.42
SF1-206ENST00000413725 VPS50Q96JG6 964 aa12.4□□□□□ -0.42
SF1-206ENST00000413725 PPP1R36Q96LQ0 422 aa12.4□□□□□ -0.42
SF1-206ENST00000413725 FAIM2Q9BWQ8 316 aa12.4□□□□□ -0.42
SF1-206ENST00000413725 EBPLQ9BY08 206 aa12.4□□□□□ -0.42
SF1-206ENST00000413725 MEAF6Q9HAF1 191 aa12.4□□□□□ -0.42
SF1-206ENST00000413725 LANCL2Q9NS86 450 aa12.4□□□□□ -0.42
SF1-206ENST00000413725 MMACHCQ9Y4U1 282 aa12.4□□□□□ -0.42
SF1-206ENST00000413725 ASB4Q9Y574 426 aa12.4□□□□□ -0.42
SF1-206ENST00000413725 IDSB3KWA1 339 aa12.39□□□□□ -0.43
SF1-206ENST00000413725 FAM227AF5H4B4 570 aa12.39□□□□□ -0.43
SF1-206ENST00000413725 EFSO43281 561 aa12.39□□□□□ -0.43
SF1-206ENST00000413725 PROM1O43490 865 aa12.39□□□□□ -0.43
SF1-206ENST00000413725 PRMT3O60678 531 aa12.39□□□□□ -0.43
SF1-206ENST00000413725 PEX11AO75192 247 aa12.39□□□□□ -0.43
SF1-206ENST00000413725 JUNP05412 331 aaKnown RBP12.39□□□□□ -0.43
SF1-206ENST00000413725 UMODP07911 640 aa12.39□□□□□ -0.43
SF1-206ENST00000413725 ANXA4P09525 319 aaPredicted RBP12.39□□□□□ -0.43
SF1-206ENST00000413725 OTX2P32243 289 aa12.39□□□□□ -0.43
SF1-206ENST00000413725 RAE1P78406 368 aaKnown RBP12.39□□□□□ -0.43
SF1-206ENST00000413725 ZNF763Q0D2J5 394 aa12.39□□□□□ -0.43
SF1-206ENST00000413725 SLC13A2Q13183 592 aa12.39□□□□□ -0.43
SF1-206ENST00000413725 MAD2L1Q13257 205 aaPredicted RBP12.39□□□□□ -0.43
SF1-206ENST00000413725 ERV3-1Q14264 604 aa12.39□□□□□ -0.43
SF1-206ENST00000413725 UGT8Q16880 541 aa12.39□□□□□ -0.43
SF1-206ENST00000413725 CRTC2Q53ET0 693 aaPredicted RBP12.39□□□□□ -0.43
SF1-206ENST00000413725 NOXRED1Q6NXP6 359 aa12.39□□□□□ -0.43
SF1-206ENST00000413725 QSOX2Q6ZRP7 698 aa12.39□□□□□ -0.43
SF1-206ENST00000413725 LAPTM4BQ86VI4 370 aa12.39□□□□□ -0.43
SF1-206ENST00000413725 NACC2Q96BF6 587 aa12.39□□□□□ -0.43
SF1-206ENST00000413725 C11orf24Q96F05 449 aaPredicted RBP12.39□□□□□ -0.43
SF1-206ENST00000413725 C3orf30Q96M34 536 aa12.39□□□□□ -0.43
SF1-206ENST00000413725 IP6K3Q96PC2 410 aa12.39□□□□□ -0.43
SF1-206ENST00000413725 CSF3RQ99062 836 aa12.39□□□□□ -0.43
SF1-206ENST00000413725 VN1R1Q9GZP7 353 aa12.39□□□□□ -0.43
SF1-206ENST00000413725 PRDM9Q9NQV7 894 aa12.39□□□□□ -0.43
SF1-206ENST00000413725 PRTFDC1Q9NRG1 225 aa12.39□□□□□ -0.43
SF1-206ENST00000413725 ZMIZ1Q9ULJ6 1067 aa12.39□□□□□ -0.43
SF1-206ENST00000413725 ATG4BQ9Y4P1 393 aa12.39□□□□□ -0.43
SF1-206ENST00000413725 POLR3HQ9Y535 204 aaPredicted RBP12.39□□□□□ -0.43
SF1-206ENST00000413725 CNTRLQ7Z7A1 2325 aa12.38□□□□□ -0.43
SF1-206ENST00000413725 CDC14CA4D256 554 aa12.38□□□□□ -0.43
SF1-206ENST00000413725 SYNDIG1LA6NDD5 238 aa12.38□□□□□ -0.43
SF1-206ENST00000413725 CYR61O00622 381 aa12.38□□□□□ -0.43
SF1-206ENST00000413725 EDF1O60869 148 aaKnown RBP12.38□□□□□ -0.43
SF1-206ENST00000413725 ALOX12BO75342 701 aa12.38□□□□□ -0.43
SF1-206ENST00000413725 AIFM1O95831 613 aa12.38□□□□□ -0.43
SF1-206ENST00000413725 C8orf89P0DMQ9 161 aa12.38□□□□□ -0.43
SF1-206ENST00000413725 ACPPP15309 386 aa12.38□□□□□ -0.43
SF1-206ENST00000413725 WT1P19544 449 aaPredicted RBP12.38□□□□□ -0.43
SF1-206ENST00000413725 MMP11P24347 488 aa12.38□□□□□ -0.43
SF1-206ENST00000413725 ITPKBP27987 946 aa12.38□□□□□ -0.43
SF1-206ENST00000413725 PPP2R1BP30154 601 aa12.38□□□□□ -0.43
SF1-206ENST00000413725 HSD17B7P56937 341 aa12.38□□□□□ -0.43
SF1-206ENST00000413725 FOXL2P58012 376 aa12.38□□□□□ -0.43
SF1-206ENST00000413725 RHAGQ02094 409 aa12.38□□□□□ -0.43
SF1-206ENST00000413725 IL10RAQ13651 578 aa12.38□□□□□ -0.43
SF1-206ENST00000413725 KIAA0040Q15053 153 aa12.38□□□□□ -0.43
SF1-206ENST00000413725 SMU1Q2TAY7 513 aa12.38□□□□□ -0.43
SF1-206ENST00000413725 RFTN2Q52LD8 501 aaPredicted RBP12.38□□□□□ -0.43
SF1-206ENST00000413725 C6orf136Q5SQH8 315 aa12.38□□□□□ -0.43
SF1-206ENST00000413725 FAM69BQ5VUD6 431 aa12.38□□□□□ -0.43
SF1-206ENST00000413725 C18orf63Q68DL7 685 aa12.38□□□□□ -0.43
SF1-206ENST00000413725 OR52E8Q6IFG1 317 aa12.38□□□□□ -0.43
SF1-206ENST00000413725 LRRC34Q8IZ02 419 aa12.38□□□□□ -0.43
SF1-206ENST00000413725 SHISA5Q8N114 240 aa12.38□□□□□ -0.43
SF1-206ENST00000413725 FNDC5Q8NAU1 212 aa12.38□□□□□ -0.43
SF1-206ENST00000413725 PLPP5Q8NEB5 264 aa12.38□□□□□ -0.43
SF1-206ENST00000413725 C7orf57Q8NEG2 295 aa12.38□□□□□ -0.43
SF1-206ENST00000413725 TANKQ92844 425 aa12.38□□□□□ -0.43
SF1-206ENST00000413725 FCRL1Q96LA6 429 aa12.38□□□□□ -0.43
SF1-206ENST00000413725 PTCHD1Q96NR3 888 aa12.38□□□□□ -0.43
SF1-206ENST00000413725 CNTNAP3BQ96NU0 1288 aa12.38□□□□□ -0.43
SF1-206ENST00000413725 CNTNAP3Q9BZ76 1288 aa12.38□□□□□ -0.43
SF1-206ENST00000413725 CCDC134Q9H6E4 229 aa12.38□□□□□ -0.43
SF1-206ENST00000413725 RPF2Q9H7B2 306 aaKnown RBP12.38□□□□□ -0.43
SF1-206ENST00000413725 C19orf25Q9UFG5 118 aaPredicted RBP12.38□□□□□ -0.43
SF1-206ENST00000413725 WBP11Q9Y2W2 641 aaKnown RBP12.38□□□□□ -0.43
SF1-206ENST00000413725 USH1CQ9Y6N9 552 aa12.38□□□□□ -0.43
SF1-206ENST00000413725 A0A1W2PR48 441 aa12.37□□□□□ -0.43
SF1-206ENST00000413725 C1orf226A1L170 272 aa12.37□□□□□ -0.43
SF1-206ENST00000413725 PEX12O00623 359 aa12.37□□□□□ -0.43
SF1-206ENST00000413725 SDHDO14521 159 aa12.37□□□□□ -0.43
SF1-206ENST00000413725 NKX2-8O15522 239 aa12.37□□□□□ -0.43
SF1-206ENST00000413725 CTNSO60931 367 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms