RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 ATP6V1HQ9UI12 483 aa16.29■□□□□ 0.2
PTPRC-206ENST00000413409 OR1A2Q9Y585 309 aa16.29■□□□□ 0.2
PTPRC-206ENST00000413409 GMEB1Q9Y692 573 aa16.29■□□□□ 0.2
PTPRC-206ENST00000413409 CRYBG3Q68DQ2 2970 aa16.29■□□□□ 0.2
PTPRC-206ENST00000413409 GSTA4O15217 222 aa16.28■□□□□ 0.2
PTPRC-206ENST00000413409 SCN2BO60939 215 aa16.28■□□□□ 0.2
PTPRC-206ENST00000413409 SEMA3DO95025 777 aa16.28■□□□□ 0.2
PTPRC-206ENST00000413409 LRATO95237 230 aa16.28■□□□□ 0.2
PTPRC-206ENST00000413409 ANXA4P09525 319 aaPredicted RBP16.28■□□□□ 0.2
PTPRC-206ENST00000413409 UBTFL6P0CB48 400 aaPredicted RBP16.28■□□□□ 0.2
PTPRC-206ENST00000413409 RAP2AP10114 183 aa16.28■□□□□ 0.2
PTPRC-206ENST00000413409 LIPCP11150 499 aa16.28■□□□□ 0.2
PTPRC-206ENST00000413409 IL1RNP18510 177 aa16.28■□□□□ 0.2
PTPRC-206ENST00000413409 GZMMP51124 257 aa16.28■□□□□ 0.2
PTPRC-206ENST00000413409 KIAA1024LP59773 190 aa16.28■□□□□ 0.2
PTPRC-206ENST00000413409 PLIN5Q00G26 463 aa16.28■□□□□ 0.2
PTPRC-206ENST00000413409 ZNF763Q0D2J5 394 aa16.28■□□□□ 0.2
PTPRC-206ENST00000413409 TMTC4Q5T4D3 741 aa16.28■□□□□ 0.2
PTPRC-206ENST00000413409 THEMIS2Q5TEJ8 643 aa16.28■□□□□ 0.2
PTPRC-206ENST00000413409 ANXA8L1Q5VT79 327 aa16.28■□□□□ 0.2
PTPRC-206ENST00000413409 UGT2A3Q6UWM9 527 aa16.28■□□□□ 0.2
PTPRC-206ENST00000413409 GCNT7Q6ZNI0 430 aa16.28■□□□□ 0.2
PTPRC-206ENST00000413409 SPRED1Q7Z699 444 aa16.28■□□□□ 0.2
PTPRC-206ENST00000413409 C17orf64Q86WR6 236 aa16.28■□□□□ 0.2
PTPRC-206ENST00000413409 FAM129CQ86XR2 697 aa16.28■□□□□ 0.2
PTPRC-206ENST00000413409 METTL4Q8N3J2 472 aa16.28■□□□□ 0.2
PTPRC-206ENST00000413409 OR10A6Q8NH74 314 aa16.28■□□□□ 0.2
PTPRC-206ENST00000413409 FAM120BQ96EK7 910 aaKnown RBP16.28■□□□□ 0.2
PTPRC-206ENST00000413409 LIN37Q96GY3 246 aaPredicted RBP16.28■□□□□ 0.2
PTPRC-206ENST00000413409 IL17FQ96PD4 163 aa16.28■□□□□ 0.2
PTPRC-206ENST00000413409 PRPF18Q99633 342 aaKnown RBP16.28■□□□□ 0.2
PTPRC-206ENST00000413409 INPP5KQ9BT40 448 aa16.28■□□□□ 0.2
PTPRC-206ENST00000413409 MENTQ9BUN1 341 aa16.28■□□□□ 0.2
PTPRC-206ENST00000413409 SPATA9Q9BWV2 254 aa16.28■□□□□ 0.2
PTPRC-206ENST00000413409 NT5DC2Q9H857 520 aa16.28■□□□□ 0.2
PTPRC-206ENST00000413409 MYNNQ9NPC7 610 aa16.28■□□□□ 0.2
PTPRC-206ENST00000413409 OLAHQ9NV23 265 aa16.28■□□□□ 0.2
PTPRC-206ENST00000413409 KLF15Q9UIH9 416 aa16.28■□□□□ 0.2
PTPRC-206ENST00000413409 CSMD1Q96PZ7 3565 aa16.28■□□□□ 0.2
PTPRC-206ENST00000413409 CACNB4O00305 520 aaPredicted RBP16.27■□□□□ 0.2
PTPRC-206ENST00000413409 PAK4O96013 591 aaPredicted RBP16.27■□□□□ 0.2
PTPRC-206ENST00000413409 LDLRP01130 860 aa16.27■□□□□ 0.2
PTPRC-206ENST00000413409 CEACAM5P06731 702 aa16.27■□□□□ 0.2
PTPRC-206ENST00000413409 ZCCHC18P0CG32 403 aa16.27■□□□□ 0.2
PTPRC-206ENST00000413409 PPIBP23284 216 aaKnown RBP16.27■□□□□ 0.2
PTPRC-206ENST00000413409 CXCR2P25025 360 aa16.27■□□□□ 0.2
PTPRC-206ENST00000413409 CLCNKAP51800 687 aa16.27■□□□□ 0.2
PTPRC-206ENST00000413409 CHN2P52757 468 aa16.27■□□□□ 0.2
PTPRC-206ENST00000413409 REEP5Q00765 189 aa16.27■□□□□ 0.2
PTPRC-206ENST00000413409 TSTA3Q13630 321 aaPredicted RBP16.27■□□□□ 0.2
PTPRC-206ENST00000413409 FZD2Q14332 565 aa16.27■□□□□ 0.2
PTPRC-206ENST00000413409 DEFB133Q30KQ1 61 aa16.27■□□□□ 0.2
PTPRC-206ENST00000413409 FAM98BQ52LJ0 330 aaKnown RBP16.27■□□□□ 0.2
PTPRC-206ENST00000413409 ADNP2Q6IQ32 1131 aa16.27■□□□□ 0.2
PTPRC-206ENST00000413409 ZBTB49Q6ZSB9 765 aa16.27■□□□□ 0.2
PTPRC-206ENST00000413409 IKBIPQ70UQ0 350 aa16.27■□□□□ 0.2
PTPRC-206ENST00000413409 ABI3BPQ7Z7G0 1075 aa16.27■□□□□ 0.2
PTPRC-206ENST00000413409 SERPINA11Q86U17 422 aa16.27■□□□□ 0.2
PTPRC-206ENST00000413409 EPHX4Q8IUS5 362 aa16.27■□□□□ 0.2
PTPRC-206ENST00000413409 GALNT4Q8N4A0 578 aa16.27■□□□□ 0.2
PTPRC-206ENST00000413409 ABHD11Q8NFV4 315 aa16.27■□□□□ 0.2
PTPRC-206ENST00000413409 OR7A2PQ8NGA2 310 aa16.27■□□□□ 0.2
PTPRC-206ENST00000413409 FAM110BQ8TC76 370 aa16.27■□□□□ 0.2
PTPRC-206ENST00000413409 COQ8BQ96D53 544 aa16.27■□□□□ 0.2
PTPRC-206ENST00000413409 PHF12Q96QT6 1004 aa16.27■□□□□ 0.2
PTPRC-206ENST00000413409 DUSP26Q9BV47 211 aa16.27■□□□□ 0.2
PTPRC-206ENST00000413409 UGT2B28Q9BY64 529 aa16.27■□□□□ 0.2
PTPRC-206ENST00000413409 RHBGQ9H310 441 aa16.27■□□□□ 0.2
PTPRC-206ENST00000413409 SLC6A13Q9NSD5 602 aa16.27■□□□□ 0.2
PTPRC-206ENST00000413409 TDRKHQ9Y2W6 561 aaKnown RBP16.27■□□□□ 0.2
PTPRC-206ENST00000413409 PCM1Q15154 2024 aa16.27■□□□□ 0.19
PTPRC-206ENST00000413409 EVPLLA8MZ36 301 aa16.26■□□□□ 0.19
PTPRC-206ENST00000413409 CXCR6O00574 342 aa16.26■□□□□ 0.19
PTPRC-206ENST00000413409 NTN3O00634 580 aaPredicted RBP16.26■□□□□ 0.19
PTPRC-206ENST00000413409 FPGTO14772 594 aa16.26■□□□□ 0.19
PTPRC-206ENST00000413409 ACP5P13686 325 aa16.26■□□□□ 0.19
PTPRC-206ENST00000413409 CDKN2CP42773 168 aa16.26■□□□□ 0.19
PTPRC-206ENST00000413409 HNRNPKP61978 463 aaKnown RBP eCLIP16.26■□□□□ 0.19
PTPRC-206ENST00000413409 TXNL4AP83876 142 aaKnown RBP16.26■□□□□ 0.19
PTPRC-206ENST00000413409 PDE7AQ13946 482 aa16.26■□□□□ 0.19
PTPRC-206ENST00000413409 MANEAQ5SRI9 462 aa16.26■□□□□ 0.19
PTPRC-206ENST00000413409 CPTPQ5TA50 214 aa16.26■□□□□ 0.19
PTPRC-206ENST00000413409 ERICH5Q6P6B1 374 aa16.26■□□□□ 0.19
PTPRC-206ENST00000413409 TMIGD1Q6UXZ0 262 aa16.26■□□□□ 0.19
PTPRC-206ENST00000413409 Q6ZSR6 202 aa16.26■□□□□ 0.19
PTPRC-206ENST00000413409 RAB11FIP2Q7L804 512 aa16.26■□□□□ 0.19
PTPRC-206ENST00000413409 COMMD6Q7Z4G1 85 aa16.26■□□□□ 0.19
PTPRC-206ENST00000413409 R3HCC1LQ7Z5L2 792 aaKnown RBP16.26■□□□□ 0.19
PTPRC-206ENST00000413409 CHERPQ8IWX8 916 aaKnown RBP16.26■□□□□ 0.19
PTPRC-206ENST00000413409 ST13P4Q8IZP2 240 aaPredicted RBP16.26■□□□□ 0.19
PTPRC-206ENST00000413409 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.26■□□□□ 0.19
PTPRC-206ENST00000413409 MTERF3Q96E29 417 aa16.26■□□□□ 0.19
PTPRC-206ENST00000413409 CIB1Q99828 191 aa16.26■□□□□ 0.19
PTPRC-206ENST00000413409 AIF1LQ9BQI0 150 aa16.26■□□□□ 0.19
PTPRC-206ENST00000413409 APOOQ9BUR5 198 aa16.26■□□□□ 0.19
PTPRC-206ENST00000413409 BHLHE41Q9C0J9 482 aaPredicted RBP16.26■□□□□ 0.19
PTPRC-206ENST00000413409 ADNPQ9H2P0 1102 aa16.26■□□□□ 0.19
PTPRC-206ENST00000413409 SPNS1Q9H2V7 528 aa16.26■□□□□ 0.19
PTPRC-206ENST00000413409 MAGIXQ9H6Y5 334 aa16.26■□□□□ 0.19
PTPRC-206ENST00000413409 GPR27Q9NS67 375 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms