RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 BACE1P56817 501 aa4.16□□□□□ -1.74
HMGB3P31-201ENST00000413333 NLRP11P59045 1033 aaKnown RBP4.16□□□□□ -1.74
HMGB3P31-201ENST00000413333 SNRPD1P62314 119 aaKnown RBP4.16□□□□□ -1.74
HMGB3P31-201ENST00000413333 KLHL30Q0D2K2 578 aa4.16□□□□□ -1.74
HMGB3P31-201ENST00000413333 SPP2Q13103 211 aa4.16□□□□□ -1.74
HMGB3P31-201ENST00000413333 KRT81Q14533 505 aa4.16□□□□□ -1.74
HMGB3P31-201ENST00000413333 TAB1Q15750 504 aa4.16□□□□□ -1.74
HMGB3P31-201ENST00000413333 CT45A2Q5DJT8 189 aa4.16□□□□□ -1.74
HMGB3P31-201ENST00000413333 Q6ZVQ6 151 aa4.16□□□□□ -1.74
HMGB3P31-201ENST00000413333 ADGRD2Q7Z7M1 963 aa4.16□□□□□ -1.74
HMGB3P31-201ENST00000413333 DCLK2Q8N568 766 aa4.16□□□□□ -1.74
HMGB3P31-201ENST00000413333 OR6M1Q8NGM8 313 aa4.16□□□□□ -1.74
HMGB3P31-201ENST00000413333 RAB39BQ96DA2 213 aa4.16□□□□□ -1.74
HMGB3P31-201ENST00000413333 PCED1BQ96HM7 432 aa4.16□□□□□ -1.74
HMGB3P31-201ENST00000413333 LURAP1Q96LR2 239 aa4.16□□□□□ -1.74
HMGB3P31-201ENST00000413333 NACA2Q9H009 215 aa4.16□□□□□ -1.74
HMGB3P31-201ENST00000413333 ATG10Q9H0Y0 220 aa4.16□□□□□ -1.74
HMGB3P31-201ENST00000413333 SLC26A1Q9H2B4 701 aa4.16□□□□□ -1.74
HMGB3P31-201ENST00000413333 TMEM231Q9H6L2 316 aa4.16□□□□□ -1.74
HMGB3P31-201ENST00000413333 UBE2TQ9NPD8 197 aaPredicted RBP4.16□□□□□ -1.74
HMGB3P31-201ENST00000413333 MED17Q9NVC6 651 aa4.16□□□□□ -1.74
HMGB3P31-201ENST00000413333 CNOT2Q9NZN8 540 aaKnown RBP4.16□□□□□ -1.74
HMGB3P31-201ENST00000413333 EPS15L1Q9UBC2 864 aa4.16□□□□□ -1.74
HMGB3P31-201ENST00000413333 ICAM5Q9UMF0 924 aa4.16□□□□□ -1.74
HMGB3P31-201ENST00000413333 AP1M2Q9Y6Q5 423 aa4.16□□□□□ -1.74
HMGB3P31-201ENST00000413333 UMODL1Q5DID0 1318 aa4.16□□□□□ -1.74
HMGB3P31-201ENST00000413333 RNF123Q5XPI4 1314 aa4.16□□□□□ -1.74
HMGB3P31-201ENST00000413333 A0A087WW49 117 aa4.15□□□□□ -1.75
HMGB3P31-201ENST00000413333 SH3PXD2BA1X283 911 aa4.15□□□□□ -1.75
HMGB3P31-201ENST00000413333 NKX6-3A6NJ46 265 aa4.15□□□□□ -1.75
HMGB3P31-201ENST00000413333 YJEFN3A6XGL0 299 aa4.15□□□□□ -1.75
HMGB3P31-201ENST00000413333 KPNA7A9QM74 516 aa4.15□□□□□ -1.75
HMGB3P31-201ENST00000413333 GRID2O43424 1007 aa4.15□□□□□ -1.75
HMGB3P31-201ENST00000413333 KHDRBS3O75525 346 aaKnown RBP4.15□□□□□ -1.75
HMGB3P31-201ENST00000413333 TXNDC12O95881 172 aa4.15□□□□□ -1.75
HMGB3P31-201ENST00000413333 C4BPBP20851 252 aa4.15□□□□□ -1.75
HMGB3P31-201ENST00000413333 PKLRP30613 574 aa4.15□□□□□ -1.75
HMGB3P31-201ENST00000413333 ACADSBP45954 432 aa4.15□□□□□ -1.75
HMGB3P31-201ENST00000413333 CCL11P51671 97 aa4.15□□□□□ -1.75
HMGB3P31-201ENST00000413333 CCR4P51679 360 aa4.15□□□□□ -1.75
HMGB3P31-201ENST00000413333 PRKCEQ02156 737 aa4.15□□□□□ -1.75
HMGB3P31-201ENST00000413333 MPPE1Q53F39 396 aa4.15□□□□□ -1.75
HMGB3P31-201ENST00000413333 HIST2H2AA3Q6FI13 130 aa4.15□□□□□ -1.75
HMGB3P31-201ENST00000413333 GALNT17Q6IS24 598 aa4.15□□□□□ -1.75
HMGB3P31-201ENST00000413333 Q6ZSR9 355 aa4.15□□□□□ -1.75
HMGB3P31-201ENST00000413333 CACUL1Q86Y37 369 aa4.15□□□□□ -1.75
HMGB3P31-201ENST00000413333 APLFQ8IW19 511 aaPredicted RBP4.15□□□□□ -1.75
HMGB3P31-201ENST00000413333 DCUN1D3Q8IWE4 304 aa4.15□□□□□ -1.75
HMGB3P31-201ENST00000413333 DND1Q8IYX4 353 aaKnown RBP4.15□□□□□ -1.75
HMGB3P31-201ENST00000413333 LSMEM2Q8N112 164 aa4.15□□□□□ -1.75
HMGB3P31-201ENST00000413333 LRRC17Q8N6Y2 441 aa4.15□□□□□ -1.75
HMGB3P31-201ENST00000413333 ADAD2Q8NCV1 583 aaKnown RBP4.15□□□□□ -1.75
HMGB3P31-201ENST00000413333 TRIM58Q8NG06 486 aa4.15□□□□□ -1.75
HMGB3P31-201ENST00000413333 OR5T2Q8NGG2 359 aa4.15□□□□□ -1.75
HMGB3P31-201ENST00000413333 ATP8B4Q8TF62 1192 aa4.15□□□□□ -1.75
HMGB3P31-201ENST00000413333 FCGR1BQ92637 280 aa4.15□□□□□ -1.75
HMGB3P31-201ENST00000413333 C14orf79Q96F83 325 aa4.15□□□□□ -1.75
HMGB3P31-201ENST00000413333 FAM218AQ96MZ4 157 aa4.15□□□□□ -1.75
HMGB3P31-201ENST00000413333 PAPOLGQ9BWT3 736 aaKnown RBP4.15□□□□□ -1.75
HMGB3P31-201ENST00000413333 WWP1Q9H0M0 922 aa4.15□□□□□ -1.75
HMGB3P31-201ENST00000413333 SDF2L1Q9HCN8 221 aa4.15□□□□□ -1.75
HMGB3P31-201ENST00000413333 HPS4Q9NQG7 708 aa4.15□□□□□ -1.75
HMGB3P31-201ENST00000413333 GDF3Q9NR23 364 aa4.15□□□□□ -1.75
HMGB3P31-201ENST00000413333 POLE3Q9NRF9 147 aa4.15□□□□□ -1.75
HMGB3P31-201ENST00000413333 ERVK-18Q9QC07 812 aa4.15□□□□□ -1.75
HMGB3P31-201ENST00000413333 PPP1R3CQ9UQK1 317 aa4.15□□□□□ -1.75
HMGB3P31-201ENST00000413333 KIF7Q2M1P5 1343 aa4.15□□□□□ -1.75
HMGB3P31-201ENST00000413333 MYH15Q9Y2K3 1946 aa4.15□□□□□ -1.75
HMGB3P31-201ENST00000413333 SHISA7A6NL88 538 aa4.14□□□□□ -1.75
HMGB3P31-201ENST00000413333 HHLA1C9JL84 531 aa4.14□□□□□ -1.75
HMGB3P31-201ENST00000413333 ANHXE9PGG2 379 aa4.14□□□□□ -1.75
HMGB3P31-201ENST00000413333 FAM72CH0Y354 149 aa4.14□□□□□ -1.75
HMGB3P31-201ENST00000413333 CHEK1O14757 476 aa4.14□□□□□ -1.75
HMGB3P31-201ENST00000413333 SURF4O15260 269 aa4.14□□□□□ -1.75
HMGB3P31-201ENST00000413333 SCGB2A1O75556 95 aa4.14□□□□□ -1.75
HMGB3P31-201ENST00000413333 DIRAS3O95661 229 aa4.14□□□□□ -1.75
HMGB3P31-201ENST00000413333 IGHEP01854 428 aa4.14□□□□□ -1.75
HMGB3P31-201ENST00000413333 UMODP07911 640 aa4.14□□□□□ -1.75
HMGB3P31-201ENST00000413333 SERPINF2P08697 491 aa4.14□□□□□ -1.75
HMGB3P31-201ENST00000413333 PATE4P0C8F1 98 aa4.14□□□□□ -1.75
HMGB3P31-201ENST00000413333 ZCCHC18P0CG32 403 aa4.14□□□□□ -1.75
HMGB3P31-201ENST00000413333 FUT1P19526 365 aa4.14□□□□□ -1.75
HMGB3P31-201ENST00000413333 DNAJB1P25685 340 aa4.14□□□□□ -1.75
HMGB3P31-201ENST00000413333 HLA-FP30511 346 aa4.14□□□□□ -1.75
HMGB3P31-201ENST00000413333 OPRL1P41146 370 aa4.14□□□□□ -1.75
HMGB3P31-201ENST00000413333 LIMK2P53671 638 aa4.14□□□□□ -1.75
HMGB3P31-201ENST00000413333 MTTPP55157 894 aa4.14□□□□□ -1.75
HMGB3P31-201ENST00000413333 GUCY2DQ02846 1103 aa4.14□□□□□ -1.75
HMGB3P31-201ENST00000413333 GABPB1Q06547 395 aaPredicted RBP4.14□□□□□ -1.75
HMGB3P31-201ENST00000413333 DPYSQ14117 519 aa4.14□□□□□ -1.75
HMGB3P31-201ENST00000413333 MTF1Q14872 753 aa4.14□□□□□ -1.75
HMGB3P31-201ENST00000413333 EXOSC7Q15024 291 aaKnown RBP4.14□□□□□ -1.75
HMGB3P31-201ENST00000413333 OR1C1Q15619 314 aa4.14□□□□□ -1.75
HMGB3P31-201ENST00000413333 SGSM1Q2NKQ1 1148 aa4.14□□□□□ -1.75
HMGB3P31-201ENST00000413333 FAM72AQ5TYM5 149 aa4.14□□□□□ -1.75
HMGB3P31-201ENST00000413333 FAM72DQ6L9T8 149 aa4.14□□□□□ -1.75
HMGB3P31-201ENST00000413333 SYVN1Q86TM6 617 aa4.14□□□□□ -1.75
HMGB3P31-201ENST00000413333 FAM72BQ86X60 149 aa4.14□□□□□ -1.75
HMGB3P31-201ENST00000413333 WDR49Q8IV35 697 aa4.14□□□□□ -1.75
HMGB3P31-201ENST00000413333 SLC22A15Q8IZD6 547 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms