RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 TRIM40Q6P9F5 258 aa13.19□□□□□ -0.3
HLA-DQB2-229ENST00000411527 TRMT10BQ6PF06 316 aaKnown RBP13.19□□□□□ -0.3
HLA-DQB2-229ENST00000411527 ZZZ3Q8IYH5 903 aa13.19□□□□□ -0.3
HLA-DQB2-229ENST00000411527 KRT78Q8N1N4 520 aa13.19□□□□□ -0.3
HLA-DQB2-229ENST00000411527 NKAPQ8N5F7 415 aaKnown RBP13.19□□□□□ -0.3
HLA-DQB2-229ENST00000411527 ZNF321PQ8N8H1 164 aa13.19□□□□□ -0.3
HLA-DQB2-229ENST00000411527 OR2L5Q8NG80 312 aa13.19□□□□□ -0.3
HLA-DQB2-229ENST00000411527 OR14A16Q8NHC5 309 aa13.19□□□□□ -0.3
HLA-DQB2-229ENST00000411527 NINJ1Q92982 152 aa13.19□□□□□ -0.3
HLA-DQB2-229ENST00000411527 CFAP36Q96G28 342 aa13.19□□□□□ -0.3
HLA-DQB2-229ENST00000411527 SERINC2Q96SA4 455 aa13.19□□□□□ -0.3
HLA-DQB2-229ENST00000411527 CSF3RQ99062 836 aa13.19□□□□□ -0.3
HLA-DQB2-229ENST00000411527 REXO4Q9GZR2 422 aaKnown RBP13.19□□□□□ -0.3
HLA-DQB2-229ENST00000411527 LIME1Q9H400 295 aa13.19□□□□□ -0.3
HLA-DQB2-229ENST00000411527 COPS7BQ9H9Q2 264 aaPredicted RBP13.19□□□□□ -0.3
HLA-DQB2-229ENST00000411527 PLAC1Q9HBJ0 212 aa13.19□□□□□ -0.3
HLA-DQB2-229ENST00000411527 SACM1LQ9NTJ5 587 aa13.19□□□□□ -0.3
HLA-DQB2-229ENST00000411527 TUBA8Q9NY65 449 aaPredicted RBP13.19□□□□□ -0.3
HLA-DQB2-229ENST00000411527 VTI1BQ9UEU0 232 aa13.19□□□□□ -0.3
HLA-DQB2-229ENST00000411527 DAPP1Q9UN19 280 aa13.19□□□□□ -0.3
HLA-DQB2-229ENST00000411527 OARD1Q9Y530 152 aa13.19□□□□□ -0.3
HLA-DQB2-229ENST00000411527 ARHGAP21Q5T5U3 1957 aa13.18□□□□□ -0.3
HLA-DQB2-229ENST00000411527 SYNDIG1LA6NDD5 238 aa13.18□□□□□ -0.3
HLA-DQB2-229ENST00000411527 PGRMC1O00264 195 aaKnown RBP13.18□□□□□ -0.3
HLA-DQB2-229ENST00000411527 DNALI1O14645 258 aaPredicted RBP13.18□□□□□ -0.3
HLA-DQB2-229ENST00000411527 SUSD5O60279 629 aa13.18□□□□□ -0.3
HLA-DQB2-229ENST00000411527 ZNF354AO60765 605 aaPredicted RBP13.18□□□□□ -0.3
HLA-DQB2-229ENST00000411527 WDR1O75083 606 aa13.18□□□□□ -0.3
HLA-DQB2-229ENST00000411527 TBX6O95947 436 aaPredicted RBP13.18□□□□□ -0.3
HLA-DQB2-229ENST00000411527 P04436 131 aa13.18□□□□□ -0.3
HLA-DQB2-229ENST00000411527 CCL3P10147 92 aa13.18□□□□□ -0.3
HLA-DQB2-229ENST00000411527 HOXB4P17483 251 aaPredicted RBP13.18□□□□□ -0.3
HLA-DQB2-229ENST00000411527 KLK2P20151 261 aa13.18□□□□□ -0.3
HLA-DQB2-229ENST00000411527 CERS1P27544 350 aa13.18□□□□□ -0.3
HLA-DQB2-229ENST00000411527 GSTM2P28161 218 aa13.18□□□□□ -0.3
HLA-DQB2-229ENST00000411527 FNTAP49354 379 aa13.18□□□□□ -0.3
HLA-DQB2-229ENST00000411527 MTTPP55157 894 aa13.18□□□□□ -0.3
HLA-DQB2-229ENST00000411527 PPP2R2AP63151 447 aa13.18□□□□□ -0.3
HLA-DQB2-229ENST00000411527 FOXO1Q12778 655 aa13.18□□□□□ -0.3
HLA-DQB2-229ENST00000411527 RCN2Q14257 317 aa13.18□□□□□ -0.3
HLA-DQB2-229ENST00000411527 ZNF460Q14592 562 aa13.18□□□□□ -0.3
HLA-DQB2-229ENST00000411527 EFTUD2Q15029 972 aaKnown RBP eCLIP13.18□□□□□ -0.3
HLA-DQB2-229ENST00000411527 CEBPEQ15744 281 aa13.18□□□□□ -0.3
HLA-DQB2-229ENST00000411527 C1orf185Q5T7R7 199 aa13.18□□□□□ -0.3
HLA-DQB2-229ENST00000411527 WLSQ5T9L3 541 aa13.18□□□□□ -0.3
HLA-DQB2-229ENST00000411527 ABHD17CQ6PCB6 329 aa13.18□□□□□ -0.3
HLA-DQB2-229ENST00000411527 OPN5Q6U736 354 aa13.18□□□□□ -0.3
HLA-DQB2-229ENST00000411527 FRA10AC1Q70Z53 315 aa13.18□□□□□ -0.3
HLA-DQB2-229ENST00000411527 WDR53Q7Z5U6 358 aaPredicted RBP13.18□□□□□ -0.3
HLA-DQB2-229ENST00000411527 GOLM1Q8NBJ4 401 aa13.18□□□□□ -0.3
HLA-DQB2-229ENST00000411527 OR5L2Q8NGL0 311 aa13.18□□□□□ -0.3
HLA-DQB2-229ENST00000411527 ANKRD7Q92527 254 aa13.18□□□□□ -0.3
HLA-DQB2-229ENST00000411527 SARAFQ96BY9 339 aa13.18□□□□□ -0.3
HLA-DQB2-229ENST00000411527 SGCZQ96LD1 299 aa13.18□□□□□ -0.3
HLA-DQB2-229ENST00000411527 CNPPD1Q9BV87 410 aa13.18□□□□□ -0.3
HLA-DQB2-229ENST00000411527 EXO5Q9H790 373 aa13.18□□□□□ -0.3
HLA-DQB2-229ENST00000411527 NT5DC2Q9H857 520 aa13.18□□□□□ -0.3
HLA-DQB2-229ENST00000411527 SEMA4BQ9NPR2 832 aaPredicted RBP13.18□□□□□ -0.3
HLA-DQB2-229ENST00000411527 ZNF358Q9NW07 568 aa13.18□□□□□ -0.3
HLA-DQB2-229ENST00000411527 CTNNAL1Q9UBT7 734 aa13.18□□□□□ -0.3
HLA-DQB2-229ENST00000411527 ASIC3Q9UHC3 531 aa13.18□□□□□ -0.3
HLA-DQB2-229ENST00000411527 ST6GALNAC2Q9UJ37 374 aa13.18□□□□□ -0.3
HLA-DQB2-229ENST00000411527 CHMP2BQ9UQN3 213 aa13.18□□□□□ -0.3
HLA-DQB2-229ENST00000411527 JRKLQ9Y4A0 524 aa13.18□□□□□ -0.3
HLA-DQB2-229ENST00000411527 NCF1BA6NI72 391 aaPredicted RBP13.17□□□□□ -0.3
HLA-DQB2-229ENST00000411527 NCF1CA8MVU1 366 aaPredicted RBP13.17□□□□□ -0.3
HLA-DQB2-229ENST00000411527 C17orf105B2RV13 164 aa13.17□□□□□ -0.3
HLA-DQB2-229ENST00000411527 LDB3O75112 727 aa13.17□□□□□ -0.3
HLA-DQB2-229ENST00000411527 NCF1P14598 390 aaPredicted RBP13.17□□□□□ -0.3
HLA-DQB2-229ENST00000411527 HPDP32754 393 aaPredicted RBP13.17□□□□□ -0.3
HLA-DQB2-229ENST00000411527 ELK3P41970 407 aa13.17□□□□□ -0.3
HLA-DQB2-229ENST00000411527 KIR2DL3P43628 341 aa13.17□□□□□ -0.3
HLA-DQB2-229ENST00000411527 SLC6A12P48065 614 aa13.17□□□□□ -0.3
HLA-DQB2-229ENST00000411527 TSNQ15631 228 aaKnown RBP13.17□□□□□ -0.3
HLA-DQB2-229ENST00000411527 HYAL4Q2M3T9 481 aa13.17□□□□□ -0.3
HLA-DQB2-229ENST00000411527 SLC25A35Q3KQZ1 300 aa13.17□□□□□ -0.3
HLA-DQB2-229ENST00000411527 ADPRMQ3LIE5 342 aa13.17□□□□□ -0.3
HLA-DQB2-229ENST00000411527 VN1R5Q7Z5H4 357 aa13.17□□□□□ -0.3
HLA-DQB2-229ENST00000411527 OR8K3Q8NH51 312 aa13.17□□□□□ -0.3
HLA-DQB2-229ENST00000411527 SLC2A12Q8TD20 617 aa13.17□□□□□ -0.3
HLA-DQB2-229ENST00000411527 KIAA1191Q96A73 305 aa13.17□□□□□ -0.3
HLA-DQB2-229ENST00000411527 RHBDF1Q96CC6 855 aa13.17□□□□□ -0.3
HLA-DQB2-229ENST00000411527 PWWP2AQ96N64 755 aa13.17□□□□□ -0.3
HLA-DQB2-229ENST00000411527 F2RL3Q96RI0 385 aa13.17□□□□□ -0.3
HLA-DQB2-229ENST00000411527 GPATCH1Q9BRR8 931 aaKnown RBP13.17□□□□□ -0.3
HLA-DQB2-229ENST00000411527 CAPS2Q9BXY5 557 aa13.17□□□□□ -0.3
HLA-DQB2-229ENST00000411527 PPP2R2CQ9Y2T4 447 aa13.17□□□□□ -0.3
HLA-DQB2-229ENST00000411527 NAV3Q8IVL0 2385 aa13.17□□□□□ -0.3
HLA-DQB2-229ENST00000411527 NCKAP5O14513 1909 aa13.17□□□□□ -0.3
HLA-DQB2-229ENST00000411527 AKAP6Q13023 2319 aa13.17□□□□□ -0.3
HLA-DQB2-229ENST00000411527 TRGV5A0A0B4J1U4 118 aa13.16□□□□□ -0.3
HLA-DQB2-229ENST00000411527 GOLGA6L10A0A0M3HER8 536 aa13.16□□□□□ -0.3
HLA-DQB2-229ENST00000411527 FAM95CA0A1B0GW59 222 aa13.16□□□□□ -0.3
HLA-DQB2-229ENST00000411527 UQCRC1P31930 480 aa13.16□□□□□ -0.3
HLA-DQB2-229ENST00000411527 PIGAP37287 484 aa13.16□□□□□ -0.3
HLA-DQB2-229ENST00000411527 ID2Q02363 134 aa13.16□□□□□ -0.3
HLA-DQB2-229ENST00000411527 TGM3Q08188 693 aa13.16□□□□□ -0.3
HLA-DQB2-229ENST00000411527 ASPHQ12797 758 aa13.16□□□□□ -0.3
HLA-DQB2-229ENST00000411527 SERTAD2Q14140 314 aa13.16□□□□□ -0.3
HLA-DQB2-229ENST00000411527 ADNP2Q6IQ32 1131 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms