RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 GRID2O43424 1007 aa2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 SPRY1O43609 319 aaPredicted RBP2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 RTN2O75298 545 aa2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 SLC22A3O75751 556 aa2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 WISP2O76076 250 aa2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 PGK1P00558 417 aa2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 CGAP01215 116 aa2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 UBTFL1P0CB47 393 aaPredicted RBP2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 SLC2A2P11168 524 aaPredicted RBP2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 CPA3P15088 417 aa2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 CYP2A7P20853 494 aa2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 LHCGRP22888 699 aa2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 CTNNB1P35222 781 aa2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 HNF4AP41235 474 aa2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 MAGEA9P43362 315 aa2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 TSFMP43897 325 aaKnown RBP2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 KHKP50053 298 aa2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 DNA2P51530 1060 aa2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 UBASH3AP57075 661 aa2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 RPP38P78345 283 aaKnown RBP2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 PMP22Q01453 160 aa2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 SLC34A1Q06495 639 aa2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 ZNF674Q2M3X9 581 aa2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 LACTB2Q53H82 288 aaPredicted RBP2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 ARMCX4Q5H9R4 360 aa2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 WDR38Q5JTN6 314 aa2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 FAM46CQ5VWP2 391 aa2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 FIP1L1Q6UN15 594 aaKnown RBP2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 MFSD6Q6ZSS7 791 aa2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 GLRX5Q86SX6 157 aa2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 TRPT1Q86TN4 253 aaKnown RBP2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 PRUNE1Q86TP1 453 aa2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 ZNF329Q86UD4 541 aa2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 RTN4RL2Q86UN3 420 aa2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 EID3Q8N140 333 aa2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 CCDC185Q8N715 623 aa2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 TMEM99Q8N816 258 aa2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 ZNF383Q8NA42 475 aa2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 RNF149Q8NC42 400 aa2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 OR11H4Q8NGC9 324 aa2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 OR10G8Q8NGN5 311 aa2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 LMO3Q8TAP4 145 aa2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 FGFBP3Q8TAT2 258 aa2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 SPATA20Q8TB22 786 aa2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 MAPK15Q8TD08 544 aa2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 HCAR2Q8TDS4 363 aa2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 MRGPRDQ8TDS7 321 aa2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 GRHL3Q8TE85 626 aa2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 GANCQ8TET4 914 aa2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 CDKN2AIPNLQ96HQ2 116 aa2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 C4orf45Q96LM5 186 aa2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 FAM20AQ96MK3 541 aa2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 KLHL5Q96PQ7 755 aa2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 IL12RB2Q99665 862 aa2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 LPAR4Q99677 370 aa2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 HNRNPABQ99729 332 aaKnown RBP2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 PSD2Q9BQI7 771 aa2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 MTG1Q9BT17 334 aaPredicted RBP2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 FSD1Q9BTV5 496 aa2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 CRNKL1Q9BZJ0 848 aaKnown RBP2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 DPEP2Q9H4A9 486 aa2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 ST6GALNAC4Q9H4F1 302 aa2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 VCPKMTQ9H867 229 aa2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 LRRC4Q9HBW1 653 aa2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 GPR173Q9NS66 373 aa2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 ZFP57Q9NU63 452 aa2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 MOSPD1Q9UJG1 213 aa2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 R4GN57 208 aa2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 TRIP12Q14669 1992 aaPredicted RBP2.34□□□□□ -2.04
RNU6-1140P-201ENST00000410517 COL4A1P02462 1669 aa2.34□□□□□ -2.04
RNU6-1140P-201ENST00000410517 DDX60LQ5H9U9 1706 aaKnown RBP2.34□□□□□ -2.04
RNU6-1140P-201ENST00000410517 ACACBO00763 2458 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 ASPMQ8IZT6 3477 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 IGHV4-4A0A075B6R2 117 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 PRR23AA6NEV1 266 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 CASTOR2A6NHX0 329 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 C17orf105B2RV13 164 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 C2CD4DB7Z1M9 353 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 PGRMC2O15173 223 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 HSF2BPO75031 334 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 LRP3O75074 770 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 ATP9AO75110 1047 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 CDC123O75794 336 aaPredicted RBP2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 CNMDO75829 334 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 ZNF432O94892 652 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 AP2A2O94973 939 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 NXPH2O95156 264 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 CXCL10P02778 98 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 IQCF3P0C7M6 154 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 THEGLP0DJG4 465 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 EEF2P13639 858 aaKnown RBP2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 ZNF18P17022 549 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 MARK3P27448 753 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 OAS2P29728 719 aaKnown RBP2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 HLA-FP30511 346 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 CHRNB4P30926 498 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 ATP6V1E1P36543 226 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 CASP3P42574 277 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 SLC1A3P43003 542 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 DLX5P56178 289 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms