RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 COMMD2Q86X83 199 aa10.86□□□□□ -0.67
SNX13-202ENST00000409604 UBALD2Q8IYN6 164 aa10.86□□□□□ -0.67
SNX13-202ENST00000409604 STX19Q8N4C7 294 aa10.86□□□□□ -0.67
SNX13-202ENST00000409604 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.86□□□□□ -0.67
SNX13-202ENST00000409604 PRRG4Q9BZD6 226 aa10.86□□□□□ -0.67
SNX13-202ENST00000409604 S1PR5Q9H228 398 aa10.86□□□□□ -0.67
SNX13-202ENST00000409604 ZNF282Q9UDV7 671 aaPredicted RBP10.86□□□□□ -0.67
SNX13-202ENST00000409604 WDR45Q9Y484 360 aa10.86□□□□□ -0.67
SNX13-202ENST00000409604 PCDHB3Q9Y5E6 796 aa10.86□□□□□ -0.67
SNX13-202ENST00000409604 SRRM3A6NNA2 597 aaPredicted RBP10.86□□□□□ -0.67
SNX13-202ENST00000409604 SOX14O95416 240 aa10.86□□□□□ -0.67
SNX13-202ENST00000409604 RNH1P13489 461 aaKnown RBP10.86□□□□□ -0.67
SNX13-202ENST00000409604 NR4A1P22736 598 aa10.86□□□□□ -0.67
SNX13-202ENST00000409604 CLK1P49759 484 aaKnown RBP10.86□□□□□ -0.67
SNX13-202ENST00000409604 CEACAM7Q14002 265 aa10.86□□□□□ -0.67
SNX13-202ENST00000409604 LRIT3Q3SXY7 679 aa10.86□□□□□ -0.67
SNX13-202ENST00000409604 FAM69BQ5VUD6 431 aa10.86□□□□□ -0.67
SNX13-202ENST00000409604 C6orf120Q7Z4R8 191 aa10.86□□□□□ -0.67
SNX13-202ENST00000409604 VTCN1Q7Z7D3 282 aa10.86□□□□□ -0.67
SNX13-202ENST00000409604 PEX5LQ8IYB4 626 aa10.86□□□□□ -0.67
SNX13-202ENST00000409604 FBXL6Q8N531 539 aa10.86□□□□□ -0.67
SNX13-202ENST00000409604 KLHL31Q9H511 634 aa10.86□□□□□ -0.67
SNX13-202ENST00000409604 S100A14Q9HCY8 104 aa10.86□□□□□ -0.67
SNX13-202ENST00000409604 DMRT3Q9NQL9 472 aa10.86□□□□□ -0.67
SNX13-202ENST00000409604 TAS2R9Q9NYW1 312 aa10.86□□□□□ -0.67
SNX13-202ENST00000409604 ZIM2Q9NZV7 527 aa10.86□□□□□ -0.67
SNX13-202ENST00000409604 MDC1Q14676 2089 aaKnown RBP10.85□□□□□ -0.67
SNX13-202ENST00000409604 ARID2Q68CP9 1835 aa10.85□□□□□ -0.67
SNX13-202ENST00000409604 G3V2T6 193 aa10.85□□□□□ -0.67
SNX13-202ENST00000409604 CDC40O60508 579 aaKnown RBP eCLIP10.85□□□□□ -0.67
SNX13-202ENST00000409604 KLHL18O94889 574 aa10.85□□□□□ -0.67
SNX13-202ENST00000409604 CHRNB1P11230 501 aa10.85□□□□□ -0.67
SNX13-202ENST00000409604 FCGR1AP12314 374 aa10.85□□□□□ -0.67
SNX13-202ENST00000409604 HOXB3P14651 431 aaPredicted RBP10.85□□□□□ -0.67
SNX13-202ENST00000409604 NUP107P57740 925 aa10.85□□□□□ -0.67
SNX13-202ENST00000409604 BNIP2Q12982 314 aa10.85□□□□□ -0.67
SNX13-202ENST00000409604 TOP3AQ13472 1001 aaPredicted RBP10.85□□□□□ -0.67
SNX13-202ENST00000409604 GRM7Q14831 915 aa10.85□□□□□ -0.67
SNX13-202ENST00000409604 ZNF311Q5JNZ3 666 aa10.85□□□□□ -0.67
SNX13-202ENST00000409604 KANK2Q63ZY3 851 aa10.85□□□□□ -0.67
SNX13-202ENST00000409604 Q6ZSR9 355 aa10.85□□□□□ -0.67
SNX13-202ENST00000409604 LNX2Q8N448 690 aa10.85□□□□□ -0.67
SNX13-202ENST00000409604 POMGNT2Q8NAT1 580 aa10.85□□□□□ -0.67
SNX13-202ENST00000409604 NUP43Q8NFH3 380 aa10.85□□□□□ -0.67
SNX13-202ENST00000409604 CRB3Q9BUF7 120 aa10.85□□□□□ -0.67
SNX13-202ENST00000409604 SPATA5L1Q9BVQ7 753 aa10.85□□□□□ -0.67
SNX13-202ENST00000409604 ALOXE3Q9BYJ1 711 aa10.85□□□□□ -0.67
SNX13-202ENST00000409604 MEAF6Q9HAF1 191 aa10.85□□□□□ -0.67
SNX13-202ENST00000409604 TMEM184CQ9NVA4 438 aa10.85□□□□□ -0.67
SNX13-202ENST00000409604 ANKRD10Q9NXR5 420 aa10.85□□□□□ -0.67
SNX13-202ENST00000409604 IL20RAQ9UHF4 553 aa10.85□□□□□ -0.67
SNX13-202ENST00000409604 GMPPBQ9Y5P6 360 aa10.85□□□□□ -0.67
SNX13-202ENST00000409604 ANK1P16157 1881 aa10.85□□□□□ -0.67
SNX13-202ENST00000409604 RBBP6Q7Z6E9 1792 aaKnown RBP10.85□□□□□ -0.67
SNX13-202ENST00000409604 LOC105369274A0A096LPK9 316 aa10.85□□□□□ -0.67
SNX13-202ENST00000409604 LOC102723532A0A0G2JNH3 316 aa10.85□□□□□ -0.67
SNX13-202ENST00000409604 TRBC2A0A5B9 178 aa10.85□□□□□ -0.67
SNX13-202ENST00000409604 SLC5A10A0PJK1 596 aa10.85□□□□□ -0.67
SNX13-202ENST00000409604 METTL12A8MUP2 240 aa10.85□□□□□ -0.67
SNX13-202ENST00000409604 G3V3Y1 287 aa10.85□□□□□ -0.67
SNX13-202ENST00000409604 ERN1O75460 977 aaKnown RBP10.85□□□□□ -0.67
SNX13-202ENST00000409604 WFS1O76024 890 aa10.85□□□□□ -0.67
SNX13-202ENST00000409604 BMP7P18075 431 aa10.85□□□□□ -0.67
SNX13-202ENST00000409604 CD247P20963 164 aa10.85□□□□□ -0.67
SNX13-202ENST00000409604 RPS15AP62244 130 aaKnown RBP10.85□□□□□ -0.67
SNX13-202ENST00000409604 EIF4EBP2Q13542 120 aaPredicted RBP10.85□□□□□ -0.67
SNX13-202ENST00000409604 HLA-BQ31612 363 aa10.85□□□□□ -0.67
SNX13-202ENST00000409604 YTHDF3Q7Z739 585 aaKnown RBP10.85□□□□□ -0.67
SNX13-202ENST00000409604 OR4N4Q8N0Y3 316 aa10.85□□□□□ -0.67
SNX13-202ENST00000409604 PDPRQ8NCN5 879 aa10.85□□□□□ -0.67
SNX13-202ENST00000409604 TEX37Q96LM6 180 aa10.85□□□□□ -0.67
SNX13-202ENST00000409604 MMADHCQ9H3L0 296 aaPredicted RBP10.85□□□□□ -0.67
SNX13-202ENST00000409604 VAPAQ9P0L0 249 aa10.85□□□□□ -0.67
SNX13-202ENST00000409604 NKX1-2Q9UD57 310 aaPredicted RBP10.85□□□□□ -0.67
SNX13-202ENST00000409604 MAPRE3Q9UPY8 281 aa10.85□□□□□ -0.67
SNX13-202ENST00000409604 SCN2AQ99250 2005 aa10.85□□□□□ -0.67
SNX13-202ENST00000409604 ZNF318Q5VUA4 2279 aa10.85□□□□□ -0.67
SNX13-202ENST00000409604 PI4KAP42356 2102 aa10.85□□□□□ -0.67
SNX13-202ENST00000409604 EFCAB7A8K855 629 aa10.85□□□□□ -0.67
SNX13-202ENST00000409604 PEX12O00623 359 aa10.85□□□□□ -0.67
SNX13-202ENST00000409604 LCMT2O60294 686 aaKnown RBP10.85□□□□□ -0.67
SNX13-202ENST00000409604 SLCO2B1O94956 709 aa10.85□□□□□ -0.67
SNX13-202ENST00000409604 PPIBP23284 216 aaKnown RBP10.85□□□□□ -0.67
SNX13-202ENST00000409604 CCKBRP32239 447 aa10.85□□□□□ -0.67
SNX13-202ENST00000409604 CRISP3P54108 245 aa10.85□□□□□ -0.67
SNX13-202ENST00000409604 KIAA1614Q5VZ46 1190 aa10.85□□□□□ -0.67
SNX13-202ENST00000409604 GRHL2Q6ISB3 625 aa10.85□□□□□ -0.67
SNX13-202ENST00000409604 ZNF765Q7L2R6 523 aa10.85□□□□□ -0.67
SNX13-202ENST00000409604 TMPRSS9Q7Z410 1059 aa10.85□□□□□ -0.67
SNX13-202ENST00000409604 ZNF547Q8IVP9 402 aa10.85□□□□□ -0.67
SNX13-202ENST00000409604 C1orf210Q8IVY1 113 aa10.85□□□□□ -0.67
SNX13-202ENST00000409604 UBQLNLQ8IYU4 475 aa10.85□□□□□ -0.67
SNX13-202ENST00000409604 CCDC74AQ96AQ1 378 aa10.85□□□□□ -0.67
SNX13-202ENST00000409604 LYSMD1Q96S90 227 aa10.85□□□□□ -0.67
SNX13-202ENST00000409604 ELF4Q99607 663 aaPredicted RBP10.85□□□□□ -0.67
SNX13-202ENST00000409604 STRADBQ9C0K7 418 aa10.85□□□□□ -0.67
SNX13-202ENST00000409604 SLC6A16Q9GZN6 736 aa10.85□□□□□ -0.67
SNX13-202ENST00000409604 SPNS1Q9H2V7 528 aa10.85□□□□□ -0.67
SNX13-202ENST00000409604 TUBB1Q9H4B7 451 aa10.85□□□□□ -0.67
SNX13-202ENST00000409604 C11orf16Q9NQ32 467 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms