RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 TPD52P55327 224 aaPredicted RBP19.66■□□□□ 0.74
USP39-203ENST00000409470 ITGA1P56199 1179 aa19.66■□□□□ 0.74
USP39-203ENST00000409470 TDGQ13569 410 aa19.66■□□□□ 0.74
USP39-203ENST00000409470 LAPTM4AQ15012 233 aa19.66■□□□□ 0.74
USP39-203ENST00000409470 COL13A1Q5TAT6 717 aaPredicted RBP19.66■□□□□ 0.74
USP39-203ENST00000409470 SAXO2Q658L1 398 aa19.66■□□□□ 0.74
USP39-203ENST00000409470 CEACAM20Q6UY09 585 aa19.66■□□□□ 0.74
USP39-203ENST00000409470 CEP68Q76N32 757 aa19.66■□□□□ 0.74
USP39-203ENST00000409470 SLC22A18ASQ8N1D0 253 aa19.66■□□□□ 0.74
USP39-203ENST00000409470 ACOT4Q8N9L9 421 aa19.66■□□□□ 0.74
USP39-203ENST00000409470 SRFBP1Q8NEF9 429 aaKnown RBP19.66■□□□□ 0.74
USP39-203ENST00000409470 LZICQ8WZA0 190 aa19.66■□□□□ 0.74
USP39-203ENST00000409470 GAS2L1Q99501 681 aaPredicted RBP19.66■□□□□ 0.74
USP39-203ENST00000409470 GPR174Q9BXC1 333 aa19.66■□□□□ 0.74
USP39-203ENST00000409470 ING2Q9H160 280 aa19.66■□□□□ 0.74
USP39-203ENST00000409470 RUBCNLQ9H714 662 aa19.66■□□□□ 0.74
USP39-203ENST00000409470 PRDM7Q9NQW5 492 aa19.66■□□□□ 0.74
USP39-203ENST00000409470 SLC2A4RGQ9NR83 387 aa19.66■□□□□ 0.74
USP39-203ENST00000409470 PCDHGA2Q9Y5H1 932 aa19.66■□□□□ 0.74
USP39-203ENST00000409470 SNX11Q9Y5W9 270 aa19.66■□□□□ 0.74
USP39-203ENST00000409470 M0QX08 132 aa19.65■□□□□ 0.74
USP39-203ENST00000409470 GUCY1B2O75343 617 aa19.65■□□□□ 0.74
USP39-203ENST00000409470 IGLV3-19P01714 112 aa19.65■□□□□ 0.74
USP39-203ENST00000409470 ARAFP10398 606 aa19.65■□□□□ 0.74
USP39-203ENST00000409470 FPR1P21462 350 aa19.65■□□□□ 0.74
USP39-203ENST00000409470 ATP5A1P25705 553 aaKnown RBP19.65■□□□□ 0.74
USP39-203ENST00000409470 CDK9P50750 372 aaKnown RBP19.65■□□□□ 0.74
USP39-203ENST00000409470 RAB8AP61006 207 aa19.65■□□□□ 0.74
USP39-203ENST00000409470 STXBP1P61764 594 aaKnown RBP19.65■□□□□ 0.74
USP39-203ENST00000409470 TUBA4AP68366 448 aa19.65■□□□□ 0.74
USP39-203ENST00000409470 EEF1A2Q05639 463 aaKnown RBP19.65■□□□□ 0.74
USP39-203ENST00000409470 KCNAB2Q13303 367 aa19.65■□□□□ 0.74
USP39-203ENST00000409470 KIR2DS3Q14952 304 aa19.65■□□□□ 0.74
USP39-203ENST00000409470 CNPY1Q3B7I2 92 aa19.65■□□□□ 0.74
USP39-203ENST00000409470 CCDC80Q76M96 950 aa19.65■□□□□ 0.74
USP39-203ENST00000409470 PAQR7Q86WK9 346 aa19.65■□□□□ 0.74
USP39-203ENST00000409470 DCP2Q8IU60 420 aaKnown RBP19.65■□□□□ 0.74
USP39-203ENST00000409470 OR10G6Q8NH81 332 aa19.65■□□□□ 0.74
USP39-203ENST00000409470 C7orf34Q96L11 122 aa19.65■□□□□ 0.74
USP39-203ENST00000409470 BARD1Q99728 777 aaKnown RBP19.65■□□□□ 0.74
USP39-203ENST00000409470 AMBRA1Q9C0C7 1298 aa19.65■□□□□ 0.74
USP39-203ENST00000409470 ACSS1Q9NUB1 689 aaPredicted RBP19.65■□□□□ 0.74
USP39-203ENST00000409470 TAS2R7Q9NYW3 318 aa19.65■□□□□ 0.74
USP39-203ENST00000409470 EHD3Q9NZN3 535 aa19.65■□□□□ 0.74
USP39-203ENST00000409470 THEGQ9P2T0 379 aa19.65■□□□□ 0.74
USP39-203ENST00000409470 A0A087WXM4 84 aa19.64■□□□□ 0.74
USP39-203ENST00000409470 VIPP01282 170 aa19.64■□□□□ 0.74
USP39-203ENST00000409470 IFNA14P01570 189 aa19.64■□□□□ 0.74
USP39-203ENST00000409470 RXRGP48443 463 aa19.64■□□□□ 0.74
USP39-203ENST00000409470 RPS15AP62244 130 aaKnown RBP19.64■□□□□ 0.74
USP39-203ENST00000409470 RPS26P62854 115 aaKnown RBP19.64■□□□□ 0.74
USP39-203ENST00000409470 ELOAQ14241 798 aaKnown RBP19.64■□□□□ 0.74
USP39-203ENST00000409470 GPR18Q14330 331 aa19.64■□□□□ 0.74
USP39-203ENST00000409470 RFX4Q33E94 735 aa19.64■□□□□ 0.74
USP39-203ENST00000409470 RBM44Q6ZP01 1051 aaKnown RBP19.64■□□□□ 0.74
USP39-203ENST00000409470 TRIM73Q86UV7 250 aa19.64■□□□□ 0.74
USP39-203ENST00000409470 C8orf59Q8N0T1 100 aaPredicted RBP19.64■□□□□ 0.74
USP39-203ENST00000409470 FRMD1Q8N878 549 aa19.64■□□□□ 0.74
USP39-203ENST00000409470 TAMM41Q96BW9 452 aa19.64■□□□□ 0.74
USP39-203ENST00000409470 GABARAPL1Q9H0R8 117 aa19.64■□□□□ 0.74
USP39-203ENST00000409470 SYNPO2LQ9H987 977 aa19.64■□□□□ 0.74
USP39-203ENST00000409470 SLC35C2Q9NQQ7 365 aa19.64■□□□□ 0.74
USP39-203ENST00000409470 APOBEC3BQ9UH17 382 aaKnown RBP19.64■□□□□ 0.74
USP39-203ENST00000409470 FBXW2Q9UKT8 454 aa19.64■□□□□ 0.74
USP39-203ENST00000409470 PADI2Q9Y2J8 665 aa19.64■□□□□ 0.74
USP39-203ENST00000409470 FANCMQ8IYD8 2048 aa19.64■□□□□ 0.74
USP39-203ENST00000409470 GSAPA4D1B5 854 aa19.64■□□□□ 0.73
USP39-203ENST00000409470 GLOD5A6NK44 160 aa19.64■□□□□ 0.73
USP39-203ENST00000409470 TMEM229AB2RXF0 380 aa19.64■□□□□ 0.73
USP39-203ENST00000409470 PRKRAO75569 313 aaKnown RBP19.64■□□□□ 0.73
USP39-203ENST00000409470 CHRNB1P11230 501 aa19.64■□□□□ 0.73
USP39-203ENST00000409470 IGFBP5P24593 272 aa19.64■□□□□ 0.73
USP39-203ENST00000409470 GPC1P35052 558 aa19.64■□□□□ 0.73
USP39-203ENST00000409470 PIGAP37287 484 aa19.64■□□□□ 0.73
USP39-203ENST00000409470 ARFIP1P53367 373 aa19.64■□□□□ 0.73
USP39-203ENST00000409470 TGM3Q08188 693 aa19.64■□□□□ 0.73
USP39-203ENST00000409470 IFI44LQ53G44 452 aa19.64■□□□□ 0.73
USP39-203ENST00000409470 ZNF542PQ5EBM4 170 aa19.64■□□□□ 0.73
USP39-203ENST00000409470 TNFAIP8L2Q6P589 184 aaPredicted RBP19.64■□□□□ 0.73
USP39-203ENST00000409470 SYT13Q7L8C5 426 aa19.64■□□□□ 0.73
USP39-203ENST00000409470 C6orf120Q7Z4R8 191 aa19.64■□□□□ 0.73
USP39-203ENST00000409470 SLC30A8Q8IWU4 369 aa19.64■□□□□ 0.73
USP39-203ENST00000409470 ZFP28Q8NHY6 868 aa19.64■□□□□ 0.73
USP39-203ENST00000409470 FCRL4Q96PJ5 515 aa19.64■□□□□ 0.73
USP39-203ENST00000409470 BBS4Q96RK4 519 aa19.64■□□□□ 0.73
USP39-203ENST00000409470 GSDMCQ9BYG8 508 aa19.64■□□□□ 0.73
USP39-203ENST00000409470 TCEAL2Q9H3H9 227 aaPredicted RBP19.64■□□□□ 0.73
USP39-203ENST00000409470 SIRT3Q9NTG7 399 aaPredicted RBP19.64■□□□□ 0.73
USP39-203ENST00000409470 PDP1Q9P0J1 537 aaPredicted RBP19.64■□□□□ 0.73
USP39-203ENST00000409470 TMEFF2Q9UIK5 374 aaPredicted RBP19.64■□□□□ 0.73
USP39-203ENST00000409470 DMTF1Q9Y222 760 aa19.64■□□□□ 0.73
USP39-203ENST00000409470 ASB4Q9Y574 426 aa19.64■□□□□ 0.73
USP39-203ENST00000409470 CCDC160A6NGH7 325 aa19.63■□□□□ 0.73
USP39-203ENST00000409470 C10orf142B7Z368 130 aa19.63■□□□□ 0.73
USP39-203ENST00000409470 POLR2CP19387 275 aaPredicted RBP19.63■□□□□ 0.73
USP39-203ENST00000409470 CERS1P27544 350 aa19.63■□□□□ 0.73
USP39-203ENST00000409470 NTSP30990 170 aa19.63■□□□□ 0.73
USP39-203ENST00000409470 IL1RL1Q01638 556 aa19.63■□□□□ 0.73
USP39-203ENST00000409470 SZRD1Q7Z422 152 aa19.63■□□□□ 0.73
USP39-203ENST00000409470 THAP5Q7Z6K1 395 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms